BLASTX nr result

ID: Aconitum21_contig00017784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00017784
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana]     69   5e-10
ref|NP_196445.1| Porphobilinogen deaminase [Arabidopsis thaliana...    69   5e-10
ref|XP_003635469.1| PREDICTED: porphobilinogen deaminase, chloro...    67   2e-09
ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arab...    64   1e-08
gb|ABR17705.1| unknown [Picea sitchensis]                              63   2e-08

>gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
          Length = 382

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/82 (45%), Positives = 50/82 (60%)
 Frame = +2

Query: 122 IITSKPHPCANTNYASTVKLLGFSSPYLKTQSLNYGRRVVFTRASSLAAVEAETQTKVSL 301
           ++T +P    NT    +V  +GFS P + + +L   RR   +     A V  E +T+ ++
Sbjct: 15  VLTRQPSSRVNTCSLGSVSAIGFSLPQISSPALGKCRRKQSSSGFVKACVAVEQKTRTAI 74

Query: 302 IRIGTRGSPLALAQAYETRAKL 367
           IRIGTRGSPLALAQAYETR KL
Sbjct: 75  IRIGTRGSPLALAQAYETREKL 96


>ref|NP_196445.1| Porphobilinogen deaminase [Arabidopsis thaliana]
           gi|2495179|sp|Q43316.1|HEM3_ARATH RecName:
           Full=Porphobilinogen deaminase, chloroplastic;
           Short=PBG; AltName: Full=Hydroxymethylbilane synthase;
           Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase;
           Flags: Precursor gi|16930521|gb|AAL31946.1|AF419614_1
           AT5g08280/F8L15_10 [Arabidopsis thaliana]
           gi|313150|emb|CAA51941.1| hydroxymethylbilane synthase
           [Arabidopsis thaliana] gi|313838|emb|CAA52061.1|
           hydroxymethylbilane synthase [Arabidopsis thaliana]
           gi|10178270|emb|CAC08328.1| hydroxymethylbilane synthase
           [Arabidopsis thaliana] gi|17979402|gb|AAL49926.1|
           putative hydroxymethylbilane synthase [Arabidopsis
           thaliana] gi|21689853|gb|AAM67570.1| putative
           hydroxymethylbilane synthase [Arabidopsis thaliana]
           gi|332003894|gb|AED91277.1| Porphobilinogen deaminase
           [Arabidopsis thaliana]
          Length = 382

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/82 (45%), Positives = 50/82 (60%)
 Frame = +2

Query: 122 IITSKPHPCANTNYASTVKLLGFSSPYLKTQSLNYGRRVVFTRASSLAAVEAETQTKVSL 301
           ++T +P    NT    +V  +GFS P + + +L   RR   +     A V  E +T+ ++
Sbjct: 15  VLTRQPSSRVNTCSLGSVSAIGFSLPQISSPALGKCRRKQSSSGFVKACVAVEQKTRTAI 74

Query: 302 IRIGTRGSPLALAQAYETRAKL 367
           IRIGTRGSPLALAQAYETR KL
Sbjct: 75  IRIGTRGSPLALAQAYETREKL 96


>ref|XP_003635469.1| PREDICTED: porphobilinogen deaminase, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 47/88 (53%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
 Frame = +2

Query: 116 MEIITSKPHPCANT-NYAS-TVKLLGFSSPYLKTQSLNYGRRVVFTRASSLAAVEAET-Q 286
           ME +     P ++T N+ S +V  LGFS P  +T  L   + V+  RAS   AVE ET +
Sbjct: 1   MEALPLSRCPSSSTVNFCSGSVSALGFSVPAFRTTHLTRKKMVI--RAS--IAVEQETHK 56

Query: 287 TKVSLIRIGTRGSPLALAQAYETRAKLI 370
           TKV+L+RIGTRGSPLALAQAYETR KL+
Sbjct: 57  TKVALVRIGTRGSPLALAQAYETRDKLM 84


>ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp.
           lyrata] gi|297319187|gb|EFH49609.1| hypothetical protein
           ARALYDRAFT_908776 [Arabidopsis lyrata subsp. lyrata]
          Length = 382

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/82 (42%), Positives = 49/82 (59%)
 Frame = +2

Query: 122 IITSKPHPCANTNYASTVKLLGFSSPYLKTQSLNYGRRVVFTRASSLAAVEAETQTKVSL 301
           ++T +P    N+    +V  +GFS P + + +L    R   +     A V  E +T+ ++
Sbjct: 15  VLTRQPSSRVNSCSLGSVSAIGFSLPQISSPALAKCHRKQSSSGFVKACVAVEQKTRTAI 74

Query: 302 IRIGTRGSPLALAQAYETRAKL 367
           IRIGTRGSPLALAQAYETR KL
Sbjct: 75  IRIGTRGSPLALAQAYETREKL 96


>gb|ABR17705.1| unknown [Picea sitchensis]
          Length = 373

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/58 (62%), Positives = 43/58 (74%)
 Frame = +2

Query: 194 SPYLKTQSLNYGRRVVFTRASSLAAVEAETQTKVSLIRIGTRGSPLALAQAYETRAKL 367
           S +L     N GRR+   RA++  AVE+ T+T VSL+RIGTRGSPLALAQAYETR KL
Sbjct: 32  SRFLPLNYENGGRRIGSVRAAA-TAVESATRTHVSLVRIGTRGSPLALAQAYETRDKL 88


Top