BLASTX nr result

ID: Aconitum21_contig00017631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00017631
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...    72   5e-11
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...    70   2e-10

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
           vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
           uncharacterized protein LOC100268141 isoform 2 [Vitis
           vinifera]
          Length = 647

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 58/133 (43%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
 Frame = -3

Query: 395 MAEEQLDYGDEEYG--QKMQYQGGGAISAXXXXXXXXXXXXXXXXXXXXNVGDGIFQLQR 222
           MAEEQLDY DEEYG  QKM +QGGGAISA                    NVG+G  Q+ R
Sbjct: 1   MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 221 SEPVSLGGVGNGVP-QVQKTGGTGPRVHEHASVPEVRIPGVVMEGKDSTLGSQFPEHNNK 45
           SE  +  GV  G P Q  KT    P+  E  +   + IPGV +EGK S     F  H  K
Sbjct: 61  SEAPAPSGVMAGGPFQAHKTD-VPPQKLEAGTSQGLIIPGVSIEGKYS--NPHF--HEKK 115

Query: 44  GGFISGKGLEEGS 6
            G ++ KG E GS
Sbjct: 116 EGPMAVKGPEMGS 128


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
           gi|223546091|gb|EEF47594.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 644

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 55/133 (41%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
 Frame = -3

Query: 395 MAEEQLDYGDEEYG--QKMQYQGGGAISAXXXXXXXXXXXXXXXXXXXXNVGDGIFQLQR 222
           MA+EQ+DY DEEYG  QK+QYQG GAI A                    N+G+   Q+ R
Sbjct: 1   MADEQIDYEDEEYGGAQKLQYQGSGAIPA-LAEEEMGEDDEYDDLYNDVNIGENFLQMHR 59

Query: 221 SE-PVSLGGVGNGVPQVQKTGGTGPRVHEHASVPEVRIPGVVMEGKDSTLGSQFPEHNNK 45
           SE P +   VGNG    Q       RV E      + IPGV +E K ST G+ FPE N K
Sbjct: 60  SEAPPAPPSVGNG--GFQPRNSNDLRV-ESGGSQGLNIPGVAVESKYST-GTHFPEQNVK 115

Query: 44  GGFISGKGLEEGS 6
           G  I   G  +GS
Sbjct: 116 GPEIGSVGYPDGS 128


Top