BLASTX nr result

ID: Aconitum21_contig00017485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00017485
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_004148880.1| PREDICTED: U3 small nucleolar RNA-associated...    87   1e-15
ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_003518943.1| PREDICTED: U3 small nucleolar RNA-associated...    81   1e-13
emb|CBI32284.3| unnamed protein product [Vitis vinifera]               79   4e-13

>ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 55/119 (46%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
 Frame = +2

Query: 134 ETQIGKTFPTKPRLKP---TPNXXXXXXXXXXXXXXTTQISNLIYPITSIXXXXXXXXXX 304
           E  I KTFPTKP+LKP   TP+              + QISNLI  I SI          
Sbjct: 11  EITISKTFPTKPKLKPKAKTPSKTPESKYWSSFK--SHQISNLISSIPSIDFSPISPHQF 68

Query: 305 XXTFSASVVLYNAQTLTPKSTFSSFTDIAYSAAFRCDGKLLAAGGESGLVQVFDVKTRS 481
               SAS+ L+++QTL+P ST S F+D+  S +FRCDG L+AA   SGL++VFDVKTR+
Sbjct: 69  AAANSASLTLFSSQTLSPTSTIS-FSDVVTSCSFRCDGSLIAASDLSGLIRVFDVKTRT 126


>ref|XP_004148880.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
           [Cucumis sativus] gi|449528790|ref|XP_004171386.1|
           PREDICTED: U3 small nucleolar RNA-associated protein 15
           homolog [Cucumis sativus]
          Length = 528

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 53/125 (42%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
 Frame = +2

Query: 110 PNSYSSMEETQIGKTFPTKPRLKPTPNXXXXXXXXXXXXXXTT-QISNLIYPITSIXXXX 286
           PNS S      + +TFP KP+LK  P                  +I NL+  ++SI    
Sbjct: 4   PNSSS------LTRTFPVKPKLKSKPRTPKQTPESKYWSSFKRHEIPNLLSSVSSIAFSP 57

Query: 287 XXXXXXXXTFSASVVLYNAQTLTPKSTFSSFTDIAYSAAFRCDGKLLAAGGESGLVQVFD 466
                   T SAS+ L++AQT+ P ST SSF D+   A+FRCDG L+AA   SGLVQVFD
Sbjct: 58  TNPSIFCATHSASLTLFSAQTMAPTSTISSFRDVVSCASFRCDGLLIAASDLSGLVQVFD 117

Query: 467 VKTRS 481
           VKTR+
Sbjct: 118 VKTRT 122


>ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|222861816|gb|EEE99358.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 52/118 (44%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
 Frame = +2

Query: 131 EETQIGKTFPTKPRLKPTPNXXXXXXXXXXXXXXTT-QISNLIYPITSIXXXXXXXXXXX 307
           +E  I KTFPTKP+LK  P                + QISNLI  I SI           
Sbjct: 10  QEITISKTFPTKPKLKSKPKTPSKTPESKYWSSFKSHQISNLISSIPSIDFSPISPHHFA 69

Query: 308 XTFSASVVLYNAQTLTPKSTFSSFTDIAYSAAFRCDGKLLAAGGESGLVQVFDVKTRS 481
              SAS+ L++  TL+P ST SS +D+  S +FRCDG L+AA   SGL++VFDVKTR+
Sbjct: 70  AANSASLTLFSPHTLSPASTISS-SDVVTSCSFRCDGSLIAASDLSGLIRVFDVKTRT 126


>ref|XP_003518943.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
           [Glycine max]
          Length = 531

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 52/121 (42%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
 Frame = +2

Query: 128 MEETQIGKTFPTKPRLKP---TPNXXXXXXXXXXXXXXTTQISNLIYPITSIXXXXXXXX 298
           MEE ++ K FP KP+LK    TP               T QI NLI  + S+        
Sbjct: 1   MEEARVQKNFPVKPKLKSMARTPKQTPESKYWSSFK--TQQIPNLI-SVPSLTFSPTPPH 57

Query: 299 XXXXTFSASVVLYNAQTLTPKSTFSSFTDIAYSAAFRCDGKLLAAGGESGLVQVFDVKTR 478
                 SAS+ LY++QTL+P +T SSF+D    A+FR D +LLAA   SGLVQVFDVK+R
Sbjct: 58  SFAAAHSASLTLYSSQTLSPAATISSFSDAVSCASFRSDSRLLAASDLSGLVQVFDVKSR 117

Query: 479 S 481
           +
Sbjct: 118 T 118


>emb|CBI32284.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
 Frame = +2

Query: 143 IGKTFPTKPRLKPTPNXXXXXXXXXXXXXXTTQ-ISNLIYPITSIXXXXXXXXXXXXTFS 319
           + +TFP KP+LK                   +  I NLI  ITS+             +S
Sbjct: 8   LSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPHHFAAAYS 67

Query: 320 ASVVLYNAQTLTPKSTFSSFTDIAYSAAFRCDGKLLAAGGESGLVQVFDVKTRS 481
            S+ L+N++TL P S+ SSF D+   A+FR DG L+AA   SGLVQVFDVKTR+
Sbjct: 68  TSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAASDHSGLVQVFDVKTRT 121


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