BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00017390
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26526.3| unnamed protein product [Vitis vinifera]              231   1e-58
ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containi...   231   1e-58
ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containi...   225   5e-57
ref|XP_002874390.1| pentatricopeptide repeat-containing protein ...   218   2e-55
ref|NP_198079.1| pentatricopeptide repeat-containing protein [Ar...   213   4e-54

>emb|CBI26526.3| unnamed protein product [Vitis vinifera]
          Length = 1005

 Score =  231 bits (589), Expect = 1e-58
 Identities = 111/147 (75%), Positives = 128/147 (87%), Gaps = 4/147 (2%)
 Frame = +2

Query: 101 LYCSTITPDPWTLSDG----PYKKHRKKPLSDDNARRIIKKKAEYLSVLRRNQGSHAQTP 268
           ++CS + PDPW+LS G    P  K+ K PLSDDNARRIIK KA YLSVLRRNQG  AQTP
Sbjct: 41  IHCS-VHPDPWSLSTGNRPKPISKNPKNPLSDDNARRIIKGKARYLSVLRRNQGPQAQTP 99

Query: 269 KWIQRTPQQMVQYLEDDRDGHLYGKHVVAAIQIVRSLASRPEGSYDMRRVMGSFVTKLTF 448
           KWI+RTP+QMVQYL+DDR+GHLYGKHVVAAI+IVRSLA+RP+GSY+MR VMGSFV KL+F
Sbjct: 100 KWIKRTPEQMVQYLQDDRNGHLYGKHVVAAIRIVRSLAARPDGSYNMREVMGSFVAKLSF 159

Query: 449 REMCIVLKEQKGWRQVRDFFAWMKLQV 529
           REMC+VLKEQ+GWRQ RDFF WMKLQ+
Sbjct: 160 REMCVVLKEQRGWRQARDFFGWMKLQL 186



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 27/69 (39%), Positives = 46/69 (66%)
 Frame = +1

Query: 466 VERAKGVEAGSRFLCLDEVAGDASKAQSIHGQVIKLGHRPADSAVASLISLYGRLQQLHR 645
           ++ A G+   S  +      GD SKAQ+++ Q++KLG    D+++ASLI+LYG+  +L +
Sbjct: 569 LKTAGGLSVASHLISKFTREGDISKAQNLNDQLVKLGRGAEDASIASLITLYGKQHKLKK 628

Query: 646 AREVFASVE 672
           A EVF+++E
Sbjct: 629 AIEVFSAIE 637


>ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Vitis vinifera]
          Length = 1071

 Score =  231 bits (589), Expect = 1e-58
 Identities = 111/147 (75%), Positives = 128/147 (87%), Gaps = 4/147 (2%)
 Frame = +2

Query: 101 LYCSTITPDPWTLSDG----PYKKHRKKPLSDDNARRIIKKKAEYLSVLRRNQGSHAQTP 268
           ++CS + PDPW+LS G    P  K+ K PLSDDNARRIIK KA YLSVLRRNQG  AQTP
Sbjct: 41  IHCS-VHPDPWSLSTGNRPKPISKNPKNPLSDDNARRIIKGKARYLSVLRRNQGPQAQTP 99

Query: 269 KWIQRTPQQMVQYLEDDRDGHLYGKHVVAAIQIVRSLASRPEGSYDMRRVMGSFVTKLTF 448
           KWI+RTP+QMVQYL+DDR+GHLYGKHVVAAI+IVRSLA+RP+GSY+MR VMGSFV KL+F
Sbjct: 100 KWIKRTPEQMVQYLQDDRNGHLYGKHVVAAIRIVRSLAARPDGSYNMREVMGSFVAKLSF 159

Query: 449 REMCIVLKEQKGWRQVRDFFAWMKLQV 529
           REMC+VLKEQ+GWRQ RDFF WMKLQ+
Sbjct: 160 REMCVVLKEQRGWRQARDFFGWMKLQL 186



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 27/69 (39%), Positives = 46/69 (66%)
 Frame = +1

Query: 466 VERAKGVEAGSRFLCLDEVAGDASKAQSIHGQVIKLGHRPADSAVASLISLYGRLQQLHR 645
           ++ A G+   S  +      GD SKAQ+++ Q++KLG    D+++ASLI+LYG+  +L +
Sbjct: 635 LKTAGGLSVASHLISKFTREGDISKAQNLNDQLVKLGRGAEDASIASLITLYGKQHKLKK 694

Query: 646 AREVFASVE 672
           A EVF+++E
Sbjct: 695 AIEVFSAIE 703


>ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Cucumis sativus]
          Length = 1062

 Score =  225 bits (574), Expect(2) = 5e-57
 Identities = 110/145 (75%), Positives = 123/145 (84%), Gaps = 6/145 (4%)
 Frame = +2

Query: 113 TITPDPWTLSDG------PYKKHRKKPLSDDNARRIIKKKAEYLSVLRRNQGSHAQTPKW 274
           ++TPDPW+LSDG      P  K+ KKPLSDDNARRIIK KA+YLSVLRRNQG  AQTPKW
Sbjct: 39  SVTPDPWSLSDGNPARPKPRSKNAKKPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKW 98

Query: 275 IQRTPQQMVQYLEDDRDGHLYGKHVVAAIQIVRSLASRPEGSYDMRRVMGSFVTKLTFRE 454
           I+RTP+QMVQYLEDDR+GHLYGKHVVAAI+ VRSL+ + EG Y+MR  M SFV KLTFRE
Sbjct: 99  IKRTPEQMVQYLEDDRNGHLYGKHVVAAIRHVRSLSQKTEGEYNMRMEMASFVEKLTFRE 158

Query: 455 MCIVLKEQKGWRQVRDFFAWMKLQV 529
           MCIVLKEQKGWRQVRD F WMKLQ+
Sbjct: 159 MCIVLKEQKGWRQVRDVFDWMKLQL 183



 Score = 21.9 bits (45), Expect(2) = 5e-57
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +1

Query: 565 IKLGHRPADSAVASLISLYGRLQQLHRAREVFASVEE 675
           ++L +RP+      ++  YG++ ++  A E F  + E
Sbjct: 181 LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLE 217


>ref|XP_002874390.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320227|gb|EFH50649.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1027

 Score =  218 bits (555), Expect(2) = 2e-55
 Identities = 105/146 (71%), Positives = 122/146 (83%), Gaps = 6/146 (4%)
 Frame = +2

Query: 110 STITPDPWTLSDG------PYKKHRKKPLSDDNARRIIKKKAEYLSVLRRNQGSHAQTPK 271
           S + PDPW+LSDG      P  +  K PLSDD+ARRIIKKKA+YLS LRRNQGSHA TPK
Sbjct: 36  SKVRPDPWSLSDGNPEKPKPRYERPKHPLSDDDARRIIKKKAQYLSTLRRNQGSHAMTPK 95

Query: 272 WIQRTPQQMVQYLEDDRDGHLYGKHVVAAIQIVRSLASRPEGSYDMRRVMGSFVTKLTFR 451
           WI+RTP+QMVQYLEDDR+G +YGKHVVAAI+ VR L+ R EGS DMR VM SFV KL+FR
Sbjct: 96  WIKRTPEQMVQYLEDDRNGQMYGKHVVAAIKTVRGLSQRREGSDDMRLVMSSFVAKLSFR 155

Query: 452 EMCIVLKEQKGWRQVRDFFAWMKLQV 529
           +MC+VLKEQ+GWRQVRDFF+WMKLQ+
Sbjct: 156 DMCVVLKEQRGWRQVRDFFSWMKLQL 181



 Score = 24.3 bits (51), Expect(2) = 2e-55
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 565 IKLGHRPADSAVASLISLYGRLQQLHRAREVFASVEE 675
           ++L +RP+      ++ LYG++ ++  A E F  + E
Sbjct: 179 LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLE 215


>ref|NP_198079.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635757|sp|O04647.2|PP399_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g27270; AltName: Full=Protein EMBRYO DEFECTIVE 976
           gi|332006282|gb|AED93665.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 1038

 Score =  213 bits (543), Expect(2) = 4e-54
 Identities = 103/146 (70%), Positives = 121/146 (82%), Gaps = 6/146 (4%)
 Frame = +2

Query: 110 STITPDPWTLSDG------PYKKHRKKPLSDDNARRIIKKKAEYLSVLRRNQGSHAQTPK 271
           S + PDPW+LSDG      P  +  K PLSDD+ARRIIKKKA+YLS LRRNQGS A TPK
Sbjct: 37  SKVRPDPWSLSDGNPEKPKPRYERPKHPLSDDDARRIIKKKAQYLSTLRRNQGSQAMTPK 96

Query: 272 WIQRTPQQMVQYLEDDRDGHLYGKHVVAAIQIVRSLASRPEGSYDMRRVMGSFVTKLTFR 451
           WI+RTP+QMVQYLEDDR+G +YGKHVVAAI+ VR L+ R +GS DMR VM SFV KL+FR
Sbjct: 97  WIKRTPEQMVQYLEDDRNGQMYGKHVVAAIKTVRGLSQRRQGSDDMRFVMSSFVAKLSFR 156

Query: 452 EMCIVLKEQKGWRQVRDFFAWMKLQV 529
           +MC+VLKEQ+GWRQVRDFF+WMKLQ+
Sbjct: 157 DMCVVLKEQRGWRQVRDFFSWMKLQL 182



 Score = 24.3 bits (51), Expect(2) = 4e-54
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 565 IKLGHRPADSAVASLISLYGRLQQLHRAREVFASVEE 675
           ++L +RP+      ++ LYG++ ++  A E F  + E
Sbjct: 180 LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLE 216