BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00017374
         (1416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257...   228   3e-57
emb|CBI27747.3| unnamed protein product [Vitis vinifera]              224   3e-56
ref|XP_002326150.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-52
ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, puta...   204   5e-50
gb|AFW71893.1| putative HLH DNA-binding domain superfamily prote...   180   7e-43

>ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
          Length = 536

 Score =  228 bits (581), Expect = 3e-57
 Identities = 171/436 (39%), Positives = 212/436 (48%), Gaps = 43/436 (9%)
 Frame = -2

Query: 1412 GLVDANVMPSYINQQSRMPNSEVLHVDLDPDS--------SPSVQP--ESGSVGSNESAP 1263
            G V+ +    Y+  Q   P S    +DL            S S +P  E   VG N + P
Sbjct: 109  GAVNGSSEVGYVGLQLNTPTSTPCSLDLGSPKQLSLIGGMSRSSRPFTELDHVGCNGNEP 168

Query: 1262 SEVQHILRDPPSLPALPPAWNPSSYSGISSLPQVSSQDRXXXXXXXXQYDDTSAAVFGIN 1083
            S+ Q  + +  +LP +P  W+  SY G SSL  V  + +        +Y D    +   N
Sbjct: 169  SDFQRSVGNFQALPPIPQLWSQPSYGGGSSLSPVMGEYKMQGFGLQGEYVDNEMDIMR-N 227

Query: 1082 SFMDGDILQDDLPALLSEQHELNNQYLSSFAVGHQIPLGRRADIHPQTQVLQLSEGNFSK 903
             ++  +ILQ D                    +   IP+  + + H        S      
Sbjct: 228  RYVGDEILQLD-------------------NISSAIPIKGKEEQHTHP----FSPSAVGP 264

Query: 902  YYT-DQSPISQLPQAPV-TSVGDCNGTVKPRVRARRGQATDPHSIAERLRREKIAERMKS 729
            + T   S +  LPQ  V T+ G CNGT KPRVRARRGQATDPHSIAERLRREKIAERMK+
Sbjct: 265  HMTMTASGLQSLPQTTVGTASGGCNGTGKPRVRARRGQATDPHSIAERLRREKIAERMKN 324

Query: 728  LQELIPNSNKTDKASMLDEIIEFVKFLQLQVKALSMSKLGAAEAFAPL------------ 585
            LQEL+PNSNKTDKASMLDEIIE+VKFLQLQVK LSMS+LGAAEA  PL            
Sbjct: 325  LQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVLSMSRLGAAEAVVPLITDGQAEGSKGL 384

Query: 584  -LSQPAGRGVVPFDSSDEIAFEQEVVKLMESDMTTAIQFLEIKGLSLMPXXXXXXXXXXX 408
             LS  AG+      S D+IAFEQEVVKLMES++T A+Q+L+ KGL LMP           
Sbjct: 385  SLSPSAGQAEDICQSPDQIAFEQEVVKLMESNVTMAMQYLQSKGLCLMPIALATAISSGK 444

Query: 407  XXXXXXSDEEMK------------------SVMTNGCEKPRAGTDKISSSDGETRSKEHG 282
                    +E K                  S  T+    P  GT   SS       K   
Sbjct: 445  AASSGTGSDEGKNGLIGGFIPNNNSSSNTSSSNTSSNSLPGIGTHHTSSDGNVLIGKLSR 504

Query: 281  RGRIPNNCNGKIIKHE 234
             G   ++CNG I K E
Sbjct: 505  EGITTSSCNGAINKQE 520


>emb|CBI27747.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  224 bits (572), Expect = 3e-56
 Identities = 160/388 (41%), Positives = 196/388 (50%), Gaps = 33/388 (8%)
 Frame = -2

Query: 1298 ESGSVGSNESAPSEVQHILRDPPSLPALPPAWNPSSYSGISSLPQVSSQDRXXXXXXXXQ 1119
            E   VG N + PS+ Q  + +  +LP +P  W+  SY G SSL  V  + +        +
Sbjct: 10   ELDHVGCNGNEPSDFQRSVGNFQALPPIPQLWSQPSYGGGSSLSPVMGEYKMQGFGLQGE 69

Query: 1118 YDDTSAAVFGINSFMDGDILQDDLPALLSEQHELNNQYLSSFAVGHQIPLGRRADIHPQT 939
            Y D    +   N ++  +ILQ D                    +   IP+  + + H   
Sbjct: 70   YVDNEMDIMR-NRYVGDEILQLD-------------------NISSAIPIKGKEEQHTHP 109

Query: 938  QVLQLSEGNFSKYYT-DQSPISQLPQAPV-TSVGDCNGTVKPRVRARRGQATDPHSIAER 765
                 S      + T   S +  LPQ  V T+ G CNGT KPRVRARRGQATDPHSIAER
Sbjct: 110  ----FSPSAVGPHMTMTASGLQSLPQTTVGTASGGCNGTGKPRVRARRGQATDPHSIAER 165

Query: 764  LRREKIAERMKSLQELIPNSNKTDKASMLDEIIEFVKFLQLQVKALSMSKLGAAEAFAPL 585
            LRREKIAERMK+LQEL+PNSNKTDKASMLDEIIE+VKFLQLQVK LSMS+LGAAEA  PL
Sbjct: 166  LRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVLSMSRLGAAEAVVPL 225

Query: 584  -------------LSQPAGRGVVPFDSSDEIAFEQEVVKLMESDMTTAIQFLEIKGLSLM 444
                         LS  AG+      S D+IAFEQEVVKLMES++T A+Q+L+ KGL LM
Sbjct: 226  ITDGQAEGSKGLSLSPSAGQAEDICQSPDQIAFEQEVVKLMESNVTMAMQYLQSKGLCLM 285

Query: 443  PXXXXXXXXXXXXXXXXXSDEEMK------------------SVMTNGCEKPRAGTDKIS 318
            P                   +E K                  S  T+    P  GT   S
Sbjct: 286  PIALATAISSGKAASSGTGSDEGKNGLIGGFIPNNNSSSNTSSSNTSSNSLPGIGTHHTS 345

Query: 317  SSDGETRSKEHGRGRIPNNCNGKIIKHE 234
            S       K    G   ++CNG I K E
Sbjct: 346  SDGNVLIGKLSREGITTSSCNGAINKQE 373


>ref|XP_002326150.1| predicted protein [Populus trichocarpa] gi|222833343|gb|EEE71820.1|
            predicted protein [Populus trichocarpa]
          Length = 456

 Score =  213 bits (542), Expect = 1e-52
 Identities = 146/375 (38%), Positives = 194/375 (51%), Gaps = 20/375 (5%)
 Frame = -2

Query: 1298 ESGSVGSNESAPSEVQHILRDPPSLPALPPAWNPSSYSGISSLPQVSSQDRXXXXXXXXQ 1119
            E+ + G N    SE    L++  +L ++P  W   SY G+SSLP +  QDR         
Sbjct: 100  EASNAGCNGREQSEYLRSLKNLQNLSSIPQLWPSQSYEGVSSLPPLMGQDRIEGSGLRGG 159

Query: 1118 YDDTSAAVFGINSFMDGDILQDDLPALLSEQHELNNQYLSSFAVGHQIPLGRRADIHPQT 939
              D    + G       +IL+ D  +         +     F+ G               
Sbjct: 160  NLDDDMHIMGKGYMGMDEILRLDKLSASPTTEGKEDLQSCPFSSG--------------- 204

Query: 938  QVLQLSEGNFSKYYTDQSPISQLPQAPVTS-VGDCNGTVKPRVRARRGQATDPHSIAERL 762
                ++E N +      + +S +PQ    + V  CNGT K RVRARRG ATDPHSIAERL
Sbjct: 205  ----IAEPNVNM---SMNQLSSMPQTTSAAPVEGCNGTGKTRVRARRGHATDPHSIAERL 257

Query: 761  RREKIAERMKSLQELIPNSNKTDKASMLDEIIEFVKFLQLQVKALSMSKLGAAEAFAPL- 585
            RREKIAERMK+LQEL+PNSNK DKASMLDEIIE+VKFLQLQVK LSMS+LGAA A  PL 
Sbjct: 258  RREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVKVLSMSRLGAAGAVIPLL 317

Query: 584  ------------LSQPAGRGVVPFDSSDEIAFEQEVVKLMESDMTTAIQFLEIKGLSLMP 441
                        LS  AG G+    S+D+IAFEQEV+KL+ESD+T A+Q+L+ KGL LMP
Sbjct: 318  TDGQPEGHNSLSLSPSAGLGIDISPSADQIAFEQEVLKLLESDVTMAMQYLQSKGLCLMP 377

Query: 440  XXXXXXXXXXXXXXXXXSDEEMKS------VMTNGCEKPRAGTDKISSSDGETRSKEHGR 279
                             + EE K+      ++++        T  +S+ +         +
Sbjct: 378  IALAAAISSVKASLSGTTSEERKNNGYTSGLVSSSSSITGIDTHPMSNDNNIATGTLSSK 437

Query: 278  GRIPNNCNGKIIKHE 234
            G I N CN +++K E
Sbjct: 438  GMIVNGCN-EVVKQE 451


>ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
            gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase
            beta chain, putative [Ricinus communis]
          Length = 592

 Score =  204 bits (519), Expect = 5e-50
 Identities = 152/409 (37%), Positives = 196/409 (47%), Gaps = 41/409 (10%)
 Frame = -2

Query: 1331 LDPDSSPSVQPESGSVGSNESAPSEVQHILRDPPSLPALPPAWNPSSYSGISSLPQVSSQ 1152
            LD  +SP    ++   G N+SA  E Q   +D  +  ++   W  +S+  +SSL     Q
Sbjct: 201  LDDLTSPLSFTKANRAGLNDSARFEYQRSFKDVQNPSSMTQLWPSTSFEDVSSLSAAMGQ 260

Query: 1151 DRXXXXXXXXQYDDTSAAVFGINSFMDGDILQDDLPA--LLSEQHELNNQYLSSFAVGHQ 978
            D            D    +      MD  +  D L A  +  ++  L    LS F VG  
Sbjct: 261  DTTQQFDLQGNLGDDLDFLGRRYISMDNILQLDKLSASVVSKDKENLQGYPLSRFTVGSN 320

Query: 977  IPLGRRADIHPQTQVLQLSEGNFSKYYTDQSPISQLPQAPVTS-VGDCNGTVKPRVRARR 801
            + +                           + +S L Q   T+    CNGT KPRVRARR
Sbjct: 321  MTM-------------------------TTNGVSYLSQTASTAPAASCNGTGKPRVRARR 355

Query: 800  GQATDPHSIAERLRREKIAERMKSLQELIPNSNKTDKASMLDEIIEFVKFLQLQVKALSM 621
            GQATDPHSIAERLRREKIAERMK+LQEL+PNS+K DKASMLDEIIE+VKFLQLQVK LSM
Sbjct: 356  GQATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQLQVKVLSM 415

Query: 620  SKLGAAEAFAPL-------------LSQPAGRGVVPFDSSDEIAFEQEVVKLMESDMTTA 480
            S+LGA  A  PL             LS  AG G+    SSD+IAFE EV+KL+ES++T A
Sbjct: 416  SRLGATGAVIPLITDGQAEGSNSLSLSTSAGLGIDVAPSSDQIAFEHEVLKLLESNVTKA 475

Query: 479  IQFLEIKGLSLMPXXXXXXXXXXXXXXXXXSDEEMKSVMTNGCEKPRAGTDKISSSDGET 300
            IQ+L+ KG  LMP                 S ++ K +        R  TD +  ++G +
Sbjct: 476  IQYLQGKGFCLMPIALAAAISSGKASLSCNSPDDKKKI--------RFNTDIVHDNNGSS 527

Query: 299  RSKEH-------------------------GRGRIPNNCNGKIIKHEAA 228
            RS                             +G + N CNG I+K E A
Sbjct: 528  RSSSSSSCNFSGTETCQVSYDCNIMTEQLGSKGMVGNGCNG-ILKLEDA 575


>gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 489

 Score =  180 bits (457), Expect = 7e-43
 Identities = 103/157 (65%), Positives = 117/157 (74%), Gaps = 25/157 (15%)
 Frame = -2

Query: 836 NGTVKPRVRARRGQATDPHSIAERLRREKIAERMKSLQELIPNSNKTDKASMLDEIIEFV 657
           NG  KPRVRARRGQATDPHSIAERLRREKI++RMK+LQEL+PNSN+TDKASMLDEIIE+V
Sbjct: 291 NGAPKPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYV 350

Query: 656 KFLQLQVKALSMSKLGAAEAFAPLLSQP----------------AGR------GVVPFDS 543
           KFLQLQVK LSMS+LGA EA  PLL+Q                 +GR      G +P  S
Sbjct: 351 KFLQLQVKVLSMSRLGATEAVVPLLTQSQTENSGGGLLLSPRSGSGRQQQARGGSLPPPS 410

Query: 542 S---DEIAFEQEVVKLMESDMTTAIQFLEIKGLSLMP 441
           S   D  AFEQEV +LMESDMTTA+Q+L+ KGL LMP
Sbjct: 411 SEVRDGAAFEQEVAQLMESDMTTAMQYLQSKGLCLMP 447