BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00017304
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containi...   303   6e-80
ref|XP_002527661.1| pentatricopeptide repeat-containing protein,...   287   3e-75
ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containi...   273   5e-71
ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containi...   253   7e-65
ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|2...   248   2e-63

>ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
            mitochondrial-like [Vitis vinifera]
            gi|297742067|emb|CBI33854.3| unnamed protein product
            [Vitis vinifera]
          Length = 767

 Score =  303 bits (775), Expect = 6e-80
 Identities = 153/331 (46%), Positives = 224/331 (67%)
 Frame = -3

Query: 994  LLDWSNGLERPGAVFDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGE 815
            LL+      R   VFD+LI+V+A + M+ENAV+VF   K  G+  S  SCN LL+CL   
Sbjct: 168  LLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEA 227

Query: 814  NKTEFVTSLVDQMKQSGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVN 635
            N+ EF+ SL ++MK +GP PN +TYTI+M+ YC  +         +ATEILEEM R G +
Sbjct: 228  NRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGES 287

Query: 634  PTVETYGIYVNELCDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRV 455
            PTV TY  Y+  LC  G V  ALDF+R L   N L++   YN++I+GLC+KGE+ EA +V
Sbjct: 288  PTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKV 347

Query: 454  MEEMQSWGVSPNVHSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCK 275
            +EEM+S G+SP+V++Y+ILI G CK  +V +   L++EM+ + ++PS+V+ SSL  GLCK
Sbjct: 348  LEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCK 407

Query: 274  RGIMDVALNTFRMIETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYN 95
            + + D++L+ FR +   GYK+D+ +Y I+I G+C   D+++A+KLM+EM+ +NLAPD  N
Sbjct: 408  KRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSN 467

Query: 94   YNSLLHNSCKTQSLEEALQFFQLILDLGTLP 2
            + SL+H  CK      AL+FF ++L+ G LP
Sbjct: 468  FESLVHGFCKMGLWVNALEFFNMMLEGGILP 498



 Score =  131 bits (329), Expect = 3e-28
 Identities = 86/329 (26%), Positives = 159/329 (48%), Gaps = 4/329 (1%)
 Frame = -3

Query: 976  GLERPGAVFDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLE--CLVG--ENK 809
            G +     + +LI+ +     +++A  + E +    + P   +   L+   C +G   N 
Sbjct: 425  GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNA 484

Query: 808  TEFVTSLVDQMKQSGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPT 629
             EF     + M + G  P+  T  +++ ++C E       ++  A  ++ EM+  G+ P 
Sbjct: 485  LEFF----NMMLEGGILPSIATCNVIIDAHCREG------RVEEALNLMNEMQTQGIFPN 534

Query: 628  VETYGIYVNELCDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVME 449
            + TY   +N LC       AL+    +  RN L S   Y+++I G  ++    +A  +  
Sbjct: 535  LFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYA 594

Query: 448  EMQSWGVSPNVHSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRG 269
             M   GV+P++ +Y ILI+ LC    + EA  L ++M  NG+ P  ++ +S++ G C+ G
Sbjct: 595  RMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIG 654

Query: 268  IMDVALNTFRMIETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYN 89
             M  A   F  +   G+    ++Y  ++DGYCK N ++ A  L+DEM    + PD+  YN
Sbjct: 655  DMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYN 714

Query: 88   SLLHNSCKTQSLEEALQFFQLILDLGTLP 2
             L+    +  +L++AL+    + + G LP
Sbjct: 715  VLIAAHRRRGNLDKALEMLNEMKENGVLP 743



 Score =  130 bits (327), Expect = 5e-28
 Identities = 86/353 (24%), Positives = 154/353 (43%), Gaps = 36/353 (10%)
 Frame = -3

Query: 952  FDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEFVTSLVDQMK 773
            ++ +I    +   ++ A+ V E +K  GI P V++ +IL+     +   E    L+++MK
Sbjct: 328  YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387

Query: 772  QSGPRPNEYTYTILMSSYCGEDATLGKKQIGRAT-EILEEMRRCGVNPTVETYGIYVNEL 596
             S   P+  +Y+ L    C       KK++   + +I  ++   G       Y I +   
Sbjct: 388  YSNMEPSLVSYSSLFHGLC-------KKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGF 440

Query: 595  CDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGL------------------------- 491
            C  GD+  A   + ++   N     S++ S+++G                          
Sbjct: 441  CMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSI 500

Query: 490  ----------CRKGEIYEAQRVMEEMQSWGVSPNVHSYNILIDGLCKNKNVIEASRLLQE 341
                      CR+G + EA  +M EMQ+ G+ PN+ +YN +I+ LCK +    A  L   
Sbjct: 501  ATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPL 560

Query: 340  MEVNGLKPSMVTISSLLDGLCKRGIMDVALNTFRMIETYGYKHDRISYCIMIDGYCKHND 161
            M    + PS+V  S+L+DG  K+     AL  +  +   G   D ++Y I+I+  C  + 
Sbjct: 561  MLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSR 620

Query: 160  VEAAYKLMDEMMTHNLAPDIYNYNSLLHNSCKTQSLEEALQFFQLILDLGTLP 2
            +  AY L  +M  + + PD  +Y S++   C+   + +A   F  +L  G LP
Sbjct: 621  MCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP 673



 Score =  121 bits (303), Expect = 3e-25
 Identities = 75/299 (25%), Positives = 148/299 (49%)
 Frame = -3

Query: 979  NGLERPGAVFDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEF 800
            N L    + F+ L+  + +  +  NA+  F ++   GI+PS+ +CN++++    E + E 
Sbjct: 459  NNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEE 518

Query: 799  VTSLVDQMKQSGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVET 620
              +L+++M+  G  PN +TY  +++  C E      ++  RA E+   M +  V P+V  
Sbjct: 519  ALNLMNEMQTQGIFPNLFTYNAVINRLCKE------RKSERALELFPLMLKRNVLPSVVV 572

Query: 619  YGIYVNELCDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQ 440
            Y   ++      +   AL     +          +Y  +I  LC +  + EA  + ++M 
Sbjct: 573  YSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMT 632

Query: 439  SWGVSPNVHSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMD 260
              G++P+  SY  +I G C+  ++ +A  L  EM   G  P++VT +SL+DG CK   +D
Sbjct: 633  ENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRID 692

Query: 259  VALNTFRMIETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSL 83
            +A      ++  G   D ++Y ++I  + +  +++ A ++++EM  + + PD   Y  L
Sbjct: 693  IADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751


>ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532966|gb|EEF34732.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 766

 Score =  287 bits (734), Expect = 3e-75
 Identities = 145/316 (45%), Positives = 213/316 (67%), Gaps = 1/316 (0%)
 Frame = -3

Query: 955  VFDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEFVTSLVDQM 776
            V +VLI+V+A + M+ +A +VF   +  G+  ++ SCN LL C    N+TEF+ SL +++
Sbjct: 180  VANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEEL 239

Query: 775  KQSGPRPNEYTYTILMSSYCGEDATLGKK-QIGRATEILEEMRRCGVNPTVETYGIYVNE 599
            K SGP PN +TYTI+M+ YC    + GK   I +ATE+LEEM   G +PTV TYG Y++ 
Sbjct: 240  KDSGPSPNVFTYTIMMNYYC--KGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHG 297

Query: 598  LCDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQSWGVSPN 419
            LC +G V  AL  +RDLR RNQ L+S  YN+VI+  CR GE++EA  ++E+M+S G+SP 
Sbjct: 298  LCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPT 357

Query: 418  VHSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMDVALNTFR 239
             +SY+ILIDGLCK   V +A  L++EM  + +KPS+VT SSL DGLCK G+ +++L+ F 
Sbjct: 358  AYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFH 417

Query: 238  MIETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSLLHNSCKTQ 59
             +   GYKHD ISY  +I+G+    D+ +A KL+ EM  +   P+ + +N L+H  CK Q
Sbjct: 418  NLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQ 477

Query: 58   SLEEALQFFQLILDLG 11
             L++AL+ F ++L +G
Sbjct: 478  RLDKALEVFTIMLKVG 493



 Score =  137 bits (345), Expect = 4e-30
 Identities = 86/322 (26%), Positives = 153/322 (47%), Gaps = 5/322 (1%)
 Frame = -3

Query: 952  FDVLIRVYARSKMVEN-----AVNVFELVKGVGIVPSVFSCNILLECLVGENKTEFVTSL 788
            + +++  Y +    +N     A  V E ++  G  P+V +    +  L      EF   L
Sbjct: 251  YTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRL 310

Query: 787  VDQMKQSGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVETYGIY 608
            +  ++      N Y Y  ++  +C         ++  A E+LE+MR  G++PT  +Y I 
Sbjct: 311  IRDLRIRNQPLNSYCYNAVIHEFCRNG------ELHEAFELLEDMRSHGISPTAYSYSIL 364

Query: 607  VNELCDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQSWGV 428
            ++ LC  G V  ALD + ++   N   S  +Y+S+  GLC+ G    +  +   + + G 
Sbjct: 365  IDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGY 424

Query: 427  SPNVHSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMDVALN 248
              +V SYN LI+G    +++  A +L+ EM +NG  P+  T + L+ G CKR  +D AL 
Sbjct: 425  KHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALE 484

Query: 247  TFRMIETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSLLHNSC 68
             F ++   G + +  +  IM D + +      A KL++E+    + P+ Y YN ++   C
Sbjct: 485  VFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLC 544

Query: 67   KTQSLEEALQFFQLILDLGTLP 2
            K Q  E+A +   ++L     P
Sbjct: 545  KEQKTEKAWEVLPVMLKNNVFP 566



 Score =  119 bits (297), Expect = 1e-24
 Identities = 79/294 (26%), Positives = 141/294 (47%)
 Frame = -3

Query: 925  RSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEFVTSLVDQMKQSGPRPNEY 746
            +S + E ++++F  +   G    V S N L+   V +        LV +M+ +G  PN +
Sbjct: 405  KSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSF 464

Query: 745  TYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVETYGIYVNELCDSGDVGGAL 566
            T+  L+  +C       ++++ +A E+   M + GV   + T  I  +E    G    AL
Sbjct: 465  TFNRLIHGFCK------RQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEAL 518

Query: 565  DFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQSWGVSPNVHSYNILIDGL 386
              + +++    + +S +YN VI  LC++ +  +A  V+  M    V P    YN LIDG 
Sbjct: 519  KLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGY 578

Query: 385  CKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMDVALNTFRMIETYGYKHDR 206
             K  N  +A  L  +M   G+ PS+VT + L++    R  M  A   F+ +   G   D 
Sbjct: 579  AKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDE 638

Query: 205  ISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSLLHNSCKTQSLEEA 44
            I +  +I G+CK  D+++A+ L +EM     +P++  Y  L+    K + +++A
Sbjct: 639  IIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKA 692



 Score =  100 bits (248), Expect = 7e-19
 Identities = 53/227 (23%), Positives = 115/227 (50%), Gaps = 5/227 (2%)
 Frame = -3

Query: 667 ILEEMRRCGVNPTVETYGIYVNELCDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLC 488
           +L+  +   +  ++    + +    ++  +  A D     R     L+  S N ++    
Sbjct: 165 LLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFA 224

Query: 487 RKGEIYEAQRVMEEMQSWGVSPNVHSYNILIDGLC-----KNKNVIEASRLLQEMEVNGL 323
              +    + + EE++  G SPNV +Y I+++  C     KN ++++A+ +L+EME+NG 
Sbjct: 225 EANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGE 284

Query: 322 KPSMVTISSLLDGLCKRGIMDVALNTFRMIETYGYKHDRISYCIMIDGYCKHNDVEAAYK 143
            P++VT  + + GLC+ G ++ AL   R +       +   Y  +I  +C++ ++  A++
Sbjct: 285 SPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFE 344

Query: 142 LMDEMMTHNLAPDIYNYNSLLHNSCKTQSLEEALQFFQLILDLGTLP 2
           L+++M +H ++P  Y+Y+ L+   CK   +E+AL   + ++     P
Sbjct: 345 LLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKP 391



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 74/299 (24%), Positives = 134/299 (44%)
 Frame = -3

Query: 979  NGLERPGAVFDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEF 800
            NG       F+ LI  + + + ++ A+ VF ++  VG+  ++F+CNI+ +    E     
Sbjct: 457  NGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWE 516

Query: 799  VTSLVDQMKQSGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVET 620
               L+++++  G  PN YTY I++   C E  T       +A E+L  M +  V P    
Sbjct: 517  ALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKT------EKAWEVLPVMLKNNVFPCAIH 570

Query: 619  YGIYVNELCDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQ 440
            Y   ++      +   AL     +       S  +Y  +I     + ++ EA  + +EM 
Sbjct: 571  YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMI 630

Query: 439  SWGVSPNVHSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMD 260
              G+ P+   +  +I G CK  ++  A  L +EM   G  P++VT + L+DG  K   MD
Sbjct: 631  KKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMD 690

Query: 259  VALNTFRMIETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSL 83
             A   F  ++      D ++Y  +I GY      +   ++ +EM  + + P+   Y +L
Sbjct: 691  KADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749


>ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like
            [Glycine max]
          Length = 827

 Score =  273 bits (698), Expect = 5e-71
 Identities = 140/333 (42%), Positives = 214/333 (64%), Gaps = 1/333 (0%)
 Frame = -3

Query: 997  ALLDWSNGLERPGAVFDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVG 818
            A LD    +ER G VFDVLI V+A + M+ENA++VF   K VG+ P + +CN LL+CLV 
Sbjct: 235  AFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVE 294

Query: 817  ENKTEFVTSLVDQMKQSGPRPNEYTYTILMSSYCGE-DATLGKKQIGRATEILEEMRRCG 641
             N+ EFV  + +++K  GP PN YTYTI+M+ YC +     G +Q   A  IL ++ R G
Sbjct: 295  ANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQ---AAVILGKIYRSG 351

Query: 640  VNPTVETYGIYVNELCDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQ 461
              PTV TY  Y++ LC  G+V  AL  +R+L + NQ L+S S+N VIYG C++GE++EA 
Sbjct: 352  EKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEAL 411

Query: 460  RVMEEMQSWGVSPNVHSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGL 281
            +V+EEM+S G+ P+V+SY+ILI+  C   +V++   L++EME + +KPS+V+ +SL+ GL
Sbjct: 412  QVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGL 471

Query: 280  CKRGIMDVALNTFRMIETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDI 101
            CK+ ++  A++ F  I     K+D   Y  +IDG+C   D+++A KL++EM+ + L P  
Sbjct: 472  CKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTA 531

Query: 100  YNYNSLLHNSCKTQSLEEALQFFQLILDLGTLP 2
            ++  SL+    K    ++AL+ F  +L  G  P
Sbjct: 532  FSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWP 564



 Score =  113 bits (282), Expect = 8e-23
 Identities = 75/289 (25%), Positives = 135/289 (46%), Gaps = 2/289 (0%)
 Frame = -3

Query: 943  LIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLE--CLVGENKTEFVTSLVDQMKQ 770
            LIR Y +  + + A+ VF  +   GI P   +CN +L+  C  G  K     +L++  ++
Sbjct: 537  LIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEAL--TLLEDFQE 594

Query: 769  SGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVETYGIYVNELCD 590
             G   N ++Y  ++   C E          RA E+L  M +  V P+V  Y   ++    
Sbjct: 595  HGFNLNPHSYNAIIYKLCKEGYP------ERALELLPRMLKRNVLPSVVNYSTLISGFAK 648

Query: 589  SGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQSWGVSPNVHS 410
              +   A++    +       + ++Y  ++       +++EA  + +EM+  G+  +  S
Sbjct: 649  QSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQIS 708

Query: 409  YNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMDVALNTFRMIE 230
            Y  LI G C N+ + +A  L +EM   G  P+++T + ++DG CK   +D+A   F  + 
Sbjct: 709  YTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMN 768

Query: 229  TYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSL 83
                  D ++Y ++ID Y KH   + A+KL D M    + PD   +N L
Sbjct: 769  RDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score =  110 bits (274), Expect = 7e-22
 Identities = 75/318 (23%), Positives = 143/318 (44%)
 Frame = -3

Query: 955  VFDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEFVTSLVDQM 776
            V++ LI  +     +++A+ + E +    +VP+ FSC  L+         +    + + M
Sbjct: 498  VYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAM 557

Query: 775  KQSGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVETYGIYVNEL 596
             + G  P+      ++   C             A  +LE+ +  G N    +Y   + +L
Sbjct: 558  LRDGIWPDTIACNYILDGSCRAG------YFKEALTLLEDFQEHGFNLNPHSYNAIIYKL 611

Query: 595  CDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQSWGVSPNV 416
            C  G    AL+ L  +  RN L S  +Y+++I G  ++     A  +   M   G++ N+
Sbjct: 612  CKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNI 671

Query: 415  HSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMDVALNTFRM 236
             +Y IL+     +  + EA  + +EM+  GL    ++ ++L+ G C    M  A   F  
Sbjct: 672  ATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEE 731

Query: 235  IETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSLLHNSCKTQS 56
            +   G   + I+Y  +IDG+CK N ++ A  + D+M   ++ PD+  Y  L+    K   
Sbjct: 732  MSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGY 791

Query: 55   LEEALQFFQLILDLGTLP 2
             ++A + + ++ D G LP
Sbjct: 792  FDQAHKLYDVMKDKGVLP 809


>ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
            mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  253 bits (645), Expect = 7e-65
 Identities = 129/318 (40%), Positives = 194/318 (61%)
 Frame = -3

Query: 955  VFDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEFVTSLVDQM 776
            V+  +IR++    M E+A+  +   K VG+   +  CN LL+CLV  N+  +  SL D M
Sbjct: 143  VYATIIRIFVELSMFEDALLTYTEAKKVGVELQL--CNFLLKCLVERNQIIYARSLFDDM 200

Query: 775  KQSGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVETYGIYVNEL 596
            K SGP PN Y+Y++LMS+Y   D    +  +  A E+L EM   GV P   TYG Y+  L
Sbjct: 201  KSSGPSPNVYSYSVLMSAYTHGD----RLYLAEAFELLSEMEMKGVKPNAATYGTYLYGL 256

Query: 595  CDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQSWGVSPNV 416
              +  V  A +FL+ L  R    ++  +N+VI G CR+G++ EA  V + M+  G+ P+ 
Sbjct: 257  SRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDT 316

Query: 415  HSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMDVALNTFRM 236
            HSY+IL+DGLCK  +V+    LL EM  NG+ P++V+ SSLL GLC+ G +++A   FR 
Sbjct: 317  HSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRR 376

Query: 235  IETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSLLHNSCKTQS 56
            +E  G+KHD I Y I+++G C+H ++E    L ++M+ HN  PD YNY SL++  C+ ++
Sbjct: 377  LEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRN 436

Query: 55   LEEALQFFQLILDLGTLP 2
            L +AL  F+L+LD G  P
Sbjct: 437  LTDALGVFELMLDSGVSP 454



 Score =  141 bits (355), Expect = 3e-31
 Identities = 88/317 (27%), Positives = 152/317 (47%)
 Frame = -3

Query: 952  FDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEFVTSLVDQMK 773
            F+ +I+ + R   V+ A+ VF+ +K  G+VP   S +IL++ L  +        L+ +M 
Sbjct: 284  FNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMA 343

Query: 772  QSGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVETYGIYVNELC 593
            ++G  P   +Y+ L+   C      GK ++  A E+   +   G       Y I +N  C
Sbjct: 344  RNGIAPTLVSYSSLLHGLC----RAGKVEL--AFELFRRLEEQGFKHDHIVYSIILNGCC 397

Query: 592  DSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQSWGVSPNVH 413
               ++    D   D+ H N +  + +Y S+IY  CR   + +A  V E M   GVSPNV 
Sbjct: 398  QHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVV 457

Query: 412  SYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMDVALNTFRMI 233
            +  IL+DG  K + + EA   L ++   G+ P++     +++GLCK    D     F  +
Sbjct: 458  TCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADM 517

Query: 232  ETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSLLHNSCKTQSL 53
               GY  D + Y I+ID + K   +  A++L  +M+     P+++ Y SL++  C    L
Sbjct: 518  IKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRL 577

Query: 52   EEALQFFQLILDLGTLP 2
             E +  F+ ++  G  P
Sbjct: 578  PEVVTLFKHMIWEGLTP 594



 Score =  113 bits (282), Expect = 8e-23
 Identities = 80/325 (24%), Positives = 136/325 (41%)
 Frame = -3

Query: 976  GLERPGAVFDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEFV 797
            G +    V+ +++    +   +E   +++  +     VP  ++   L+            
Sbjct: 381  GFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDA 440

Query: 796  TSLVDQMKQSGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVETY 617
              + + M  SG  PN  T TIL+  +  E      + I  A   L ++R+ G+ P +  Y
Sbjct: 441  LGVFELMLDSGVSPNVVTCTILVDGFGKE------RMIDEAFLFLHKVRQFGIVPNLCMY 494

Query: 616  GIYVNELCDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQS 437
             + +N LC             D+  R  +  +  Y+ +I    +  ++ EA R+  +M  
Sbjct: 495  RVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLD 554

Query: 436  WGVSPNVHSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMDV 257
             G  PNV +Y  LI+GLC +  + E   L + M   GL P  +  +SL+   CKR  M  
Sbjct: 555  EGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKA 614

Query: 256  ALNTFRMIETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSLLH 77
            AL  FR +   G   D   Y  +I G+ K   ++ A  LM+EM    L P +  Y +L+ 
Sbjct: 615  ALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLII 674

Query: 76   NSCKTQSLEEALQFFQLILDLGTLP 2
               K     +A   +  +L  G  P
Sbjct: 675  GYFKIGDERKANMTYNSMLQAGITP 699



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 61/253 (24%), Positives = 110/253 (43%)
 Frame = -3

Query: 946  VLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEFVTSLVDQMKQS 767
            +L+  + + +M++ A      V+  GIVP++    +++  L   NK++ V  +   M + 
Sbjct: 461  ILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKR 520

Query: 766  GPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVETYGIYVNELCDS 587
            G  P+   Y+I++ S+      +   ++  A  +  +M   G  P V TY   +N LC  
Sbjct: 521  GYVPDTVVYSIIIDSF------VKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHD 574

Query: 586  GDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQSWGVSPNVHSY 407
              +   +   + +           Y S+I   C++  +  A  +   M   G+S +   Y
Sbjct: 575  DRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLY 634

Query: 406  NILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMDVALNTFRMIET 227
              LI G  K   +  A  L++EM   GL PS+VT ++L+ G  K G    A  T+  +  
Sbjct: 635  TCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQ 694

Query: 226  YGYKHDRISYCIM 188
             G   D    CI+
Sbjct: 695  AGITPDAKLSCIL 707



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 65/280 (23%), Positives = 115/280 (41%)
 Frame = -3

Query: 943  LIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEFVTSLVDQMKQSG 764
            LI  + R + + +A+ VFEL+   G+ P+V +C IL++    E   +     + +++Q G
Sbjct: 427  LIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFG 486

Query: 763  PRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVETYGIYVNELCDSG 584
              PN   Y ++++  C  + +           I  +M + G  P    Y I ++    + 
Sbjct: 487  IVPNLCMYRVIINGLCKVNKS------DHVWGIFADMIKRGYVPDTVVYSIIIDSFVKAL 540

Query: 583  DVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQSWGVSPNVHSYN 404
             +  A      +       +  +Y S+I GLC    + E   + + M   G++P+   Y 
Sbjct: 541  KLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYT 600

Query: 403  ILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMDVALNTFRMIETY 224
             LI   CK  N+  A  + + M   GL       + L+ G  K   MD A      +   
Sbjct: 601  SLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNK 660

Query: 223  GYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPD 104
            G     ++Y  +I GY K  D   A    + M+   + PD
Sbjct: 661  GLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPD 700


>ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|222833858|gb|EEE72335.1|
            predicted protein [Populus trichocarpa]
          Length = 697

 Score =  248 bits (632), Expect = 2e-63
 Identities = 135/331 (40%), Positives = 203/331 (61%), Gaps = 1/331 (0%)
 Frame = -3

Query: 991  LDWSNGLERPGAVFDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGEN 812
            LD    + R   V  +LI+V+A +KM+ +A +VF   K +G+  ++ SCN LL+CL   +
Sbjct: 105  LDSPECVGRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGD 164

Query: 811  KTEFVTSLVDQMKQSGPRPNEYTYTILMSSYCGEDATLGKK-QIGRATEILEEMRRCGVN 635
            K E V SL D +K SGP PN YTYTI+++ YC E    G+   + +A+ ILEEM   G N
Sbjct: 165  KLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERH--GQNIDMEQASLILEEMEEKGEN 222

Query: 634  PTVETYGIYVNELCDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRV 455
            PTV TYG+Y++ LC  G +  A + ++DLR  NQ L+   YN++I G C+KG   EA ++
Sbjct: 223  PTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKL 282

Query: 454  MEEMQSWGVSPNVHSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCK 275
            +EEM+  G+SP+++SY+IL++  C   ++     L+QEME    KP +V  +S+L GL  
Sbjct: 283  LEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRT 342

Query: 274  RGIMDVALNTFRMIETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYN 95
            +G+++  LN F  +   GYKHD ISY  +I G+ K ++V++A  L+ EM  + L PD   
Sbjct: 343  KGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYII 402

Query: 94   YNSLLHNSCKTQSLEEALQFFQLILDLGTLP 2
            Y SL+   C+   L+EAL+ F  +L  G  P
Sbjct: 403  YISLIREYCRKGCLKEALKNFYTMLQDGLQP 433



 Score =  131 bits (330), Expect = 2e-28
 Identities = 83/311 (26%), Positives = 156/311 (50%), Gaps = 2/311 (0%)
 Frame = -3

Query: 970  ERPGAVFDVLIRVYARSK-MVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEFVT 794
            ++P  V    + +  R+K +V + +N F  +   G    + S + L+   +  +  +   
Sbjct: 326  KKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSAN 385

Query: 793  SLVDQMKQSGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVETYG 614
            +LV +M+++G  P+   Y  L+  YC +        +  A +    M + G+ P + T  
Sbjct: 386  NLVHEMRKNGLVPDYIIYISLIREYCRKGC------LKEALKNFYTMLQDGLQPDIITCN 439

Query: 613  IYVNELCDSGDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEMQSW 434
              V++ C  G    AL ++  ++ +N L +S +Y+ +I  LC+   + +A  V+  M   
Sbjct: 440  HIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKD 499

Query: 433  GVSPNVHSYNILIDGLCKN-KNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIMDV 257
             + P+V  Y  ++DG  K  KN ++A +L ++M   G KP  VT++ L+D   KRG M  
Sbjct: 500  NIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSK 559

Query: 256  ALNTFRMIETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSLLH 77
            ALN F+ +   G   D  ++  +IDGYC+  +V+ A+ +  +M  +N+ P++  Y  L+ 
Sbjct: 560  ALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVD 619

Query: 76   NSCKTQSLEEA 44
              CK + L+ A
Sbjct: 620  GFCKLKRLDMA 630



 Score =  103 bits (258), Expect = 5e-20
 Identities = 72/300 (24%), Positives = 141/300 (47%), Gaps = 1/300 (0%)
 Frame = -3

Query: 979  NGLERPGAVFDVLIRVYARSKMVENAVNVFELVKGVGIVPSVFSCNILLECLVGENKTEF 800
            NGL     ++  LIR Y R   ++ A+  F  +   G+ P + +CN +++      + E 
Sbjct: 394  NGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEE 453

Query: 799  VTSLVDQMKQSGPRPNEYTYTILMSSYCGEDATLGKKQIGRATEILEEMRRCGVNPTVET 620
                ++QMK     PN YTY+++++  C   A      + +A E+L  M +  + P+V  
Sbjct: 454  ALIYINQMKDQNILPNSYTYSVIINWLCKYQA------VEKAWEVLPVMFKDNIFPSVIH 507

Query: 619  YGIYVNELCDS-GDVGGALDFLRDLRHRNQLLSSSSYNSVIYGLCRKGEIYEAQRVMEEM 443
            Y   ++       +   A    R +        + +   ++    ++G++ +A  + +EM
Sbjct: 508  YTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEM 567

Query: 442  QSWGVSPNVHSYNILIDGLCKNKNVIEASRLLQEMEVNGLKPSMVTISSLLDGLCKRGIM 263
               G+S +  ++  +IDG C+  NV  A  + ++M+ N + P++ T + L+DG CK   +
Sbjct: 568  AEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRL 627

Query: 262  DVALNTFRMIETYGYKHDRISYCIMIDGYCKHNDVEAAYKLMDEMMTHNLAPDIYNYNSL 83
            D+A      ++      D  +Y  +I GY +  +++ AY++ DEM      PD   Y +L
Sbjct: 628  DMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTL 687