BLASTX nr result

ID: Aconitum21_contig00017153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00017153
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACT21194.1| zinc finger protein [Carica papaya]                    113   4e-23
ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...   110   4e-22
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|1...   110   4e-22
ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   110   4e-22
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]   110   4e-22

>gb|ACT21194.1| zinc finger protein [Carica papaya]
          Length = 340

 Score =  113 bits (283), Expect = 4e-23
 Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 5/117 (4%)
 Frame = -1

Query: 343 FQIPSTIRLSDAYL---LDRLIQHLTXXXXXXXXXXXXHGSTPTAKSCVESIPTVKITSL 173
           F++P ++ L D +L   L++LIQ L              G+ P +KS +E++PT+KI   
Sbjct: 137 FRLPGSLNLGDYFLGPGLEQLIQQLAENDPNRH------GTPPASKSAIEALPTIKIFQE 190

Query: 172 --SSDTSLCAVCKDEFLVNVEVKQLPCNHIYHFDCILPWLEMHNSCPVCRFLLPAEE 8
              SD+S CAVCKD F +  E KQ+PC HIYH  CILPWLE+HNSCPVCR+ LP ++
Sbjct: 191 MPDSDSSQCAVCKDSFALAEEAKQMPCKHIYHSQCILPWLELHNSCPVCRYELPTDD 247


>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  110 bits (274), Expect = 4e-22
 Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 5/117 (4%)
 Frame = -1

Query: 343 FQIPSTIRLSDAYL---LDRLIQHLTXXXXXXXXXXXXHGSTPTAKSCVESIPTVKITS- 176
           F++P+   L D ++   L++LIQ L              G+ P +KS VE++P +K+T  
Sbjct: 141 FRLPAN--LGDYFIGPGLEQLIQQLAENDPNRY------GTPPASKSAVENLPDIKVTKE 192

Query: 175 -LSSDTSLCAVCKDEFLVNVEVKQLPCNHIYHFDCILPWLEMHNSCPVCRFLLPAEE 8
            L SD+S CAVCKD F +  E KQ+PC HIYH DCI PWLE+HNSCPVCR+ LP ++
Sbjct: 193 LLESDSSQCAVCKDSFELGEEAKQIPCKHIYHKDCITPWLELHNSCPVCRYELPTDD 249


>ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|118486397|gb|ABK95038.1|
           unknown [Populus trichocarpa]
           gi|222870634|gb|EEF07765.1| predicted protein [Populus
           trichocarpa]
          Length = 345

 Score =  110 bits (274), Expect = 4e-22
 Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 5/118 (4%)
 Frame = -1

Query: 343 FQIPSTIRLSDAYL---LDRLIQHLTXXXXXXXXXXXXHGSTPTAKSCVESIPTVKITS- 176
           F++P+   L D ++   L++LIQ L              G+ P AKS VE++P VK+T  
Sbjct: 140 FRVPAN--LGDYFIGPGLEQLIQQLAENDPNRY------GTPPAAKSAVENLPDVKVTEE 191

Query: 175 -LSSDTSLCAVCKDEFLVNVEVKQLPCNHIYHFDCILPWLEMHNSCPVCRFLLPAEER 5
            + SD+S CAVCKD F +    KQ+PC HIYH DCI+PWLE+HNSCPVCR+ LP +++
Sbjct: 192 LMQSDSSQCAVCKDSFELGEVAKQIPCKHIYHKDCIMPWLELHNSCPVCRYELPTDDQ 249


>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
           vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
           ubiquitin-protein ligase RING1 isoform 2 [Vitis
           vinifera]
          Length = 369

 Score =  110 bits (274), Expect = 4e-22
 Identities = 46/78 (58%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
 Frame = -1

Query: 235 GSTPTAKSCVESIPTVKITS--LSSDTSLCAVCKDEFLVNVEVKQLPCNHIYHFDCILPW 62
           G+ P +KS +E +PT++IT   L +D+S CAVCKD F ++ E KQ+PC HIYH DCILPW
Sbjct: 188 GTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPW 247

Query: 61  LEMHNSCPVCRFLLPAEE 8
           LE+HNSCPVCR+ LP ++
Sbjct: 248 LELHNSCPVCRYELPTDD 265


>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
          Length = 371

 Score =  110 bits (274), Expect = 4e-22
 Identities = 46/78 (58%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
 Frame = -1

Query: 235 GSTPTAKSCVESIPTVKITS--LSSDTSLCAVCKDEFLVNVEVKQLPCNHIYHFDCILPW 62
           G+ P +KS +E +PT++IT   L +D+S CAVCKD F ++ E KQ+PC HIYH DCILPW
Sbjct: 190 GTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPW 249

Query: 61  LEMHNSCPVCRFLLPAEE 8
           LE+HNSCPVCR+ LP ++
Sbjct: 250 LELHNSCPVCRYELPTDD 267


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