BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00017034
         (1391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40152.3| unnamed protein product [Vitis vinifera]              655   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   655   0.0  
ref|XP_002299208.1| RNA polymerase IV subunit [Populus trichocar...   636   e-180
ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocar...   633   e-179
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   630   e-178

>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  655 bits (1689), Expect = 0.0
 Identities = 319/462 (69%), Positives = 384/462 (83%)
 Frame = +1

Query: 4    KGSGYCSRGVITGDAYKKVNEIGLPLEVAQRITFEEKVTECNKDHLQELVDKKLCLTYKD 183
            KGSG+ SR VITGDAYK+VNEIGLP E+AQRITFEE+V   N  HLQ LVD+KLCLTY+D
Sbjct: 378  KGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHNMKHLQNLVDEKLCLTYRD 437

Query: 184  GASMYSLREGSKGHTLLKVGQVVHRRIMDGDILFINRPPSTHKHSLQALSVYVHEDNTVK 363
            G S YSLREGSKGHT L+ GQVVHRRIMDGDI+FINRPP+THKHSLQALSVYVH+D+TVK
Sbjct: 438  GLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVK 497

Query: 364  INPLICGPLDADFDGDCVHLFYPQSLAARAEVVELFSVEQQLLSSHSGCLNLQLKNDSLL 543
            INPLICGPL ADFDGDCVHLFYPQSL A+AEV+ELFSVE+QLLSSHSG LNLQL  DSLL
Sbjct: 498  INPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLL 557

Query: 544  SLKIMFKRFFLNKVTAQQLAMFITTNLPQPALLKANCVASQWTVLQILQMALPSQFDCLG 723
            SLK++F+R+FLNK  AQQL MF++ +LP+PALLK+ C    WT LQILQ ALPS FDC+G
Sbjct: 558  SLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIG 617

Query: 724  ERFFISDGEILKVDFNKDILQSMFNDIISSVLFQMDSKEALNVFNSLQPLLMENLFLDGY 903
            ER +IS   ILKVD+N+D+LQS+ N+I++S+  +    E L  F+SLQPLLMENLF +G+
Sbjct: 618  ERHWISKSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGF 677

Query: 904  SVCLKDFYISKSVLGNLPRSIQEVSPLLRQLRSTYNELVELQVGNHLRNVKAPIVNFILK 1083
            SV L+DF I   V  N+ ++++++S LL  LRS YNEL++LQ  NHLR  K P+ NFIL 
Sbjct: 678  SVSLEDFSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILN 737

Query: 1084 SSGLGNLIDSKSESSINKVVEQMGFLGLQLADRGKFYSRNLVEDMTSLFLHKYAVNGVEC 1263
            SS LGNLIDSKS+S+INKVV+Q+GFLG QL+++GKFYSR LVE M  LF  KY  +G + 
Sbjct: 738  SSALGNLIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADY 797

Query: 1264 PSEAFGLIKSCFFHGLNPYEDLVHSISSREVLVRSSRGLTEP 1389
            PS  FGLI+SCFFHGL+PYE++VHSIS+RE++VRSSRGL+EP
Sbjct: 798  PSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEP 839


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  655 bits (1689), Expect = 0.0
 Identities = 319/462 (69%), Positives = 384/462 (83%)
 Frame = +1

Query: 4    KGSGYCSRGVITGDAYKKVNEIGLPLEVAQRITFEEKVTECNKDHLQELVDKKLCLTYKD 183
            KGSG+ SR VITGDAYK+VNEIGLP E+AQRITFEE+V   N  HLQ LVD+KLCLTY+D
Sbjct: 318  KGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHNMKHLQNLVDEKLCLTYRD 377

Query: 184  GASMYSLREGSKGHTLLKVGQVVHRRIMDGDILFINRPPSTHKHSLQALSVYVHEDNTVK 363
            G S YSLREGSKGHT L+ GQVVHRRIMDGDI+FINRPP+THKHSLQALSVYVH+D+TVK
Sbjct: 378  GLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVK 437

Query: 364  INPLICGPLDADFDGDCVHLFYPQSLAARAEVVELFSVEQQLLSSHSGCLNLQLKNDSLL 543
            INPLICGPL ADFDGDCVHLFYPQSL A+AEV+ELFSVE+QLLSSHSG LNLQL  DSLL
Sbjct: 438  INPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLL 497

Query: 544  SLKIMFKRFFLNKVTAQQLAMFITTNLPQPALLKANCVASQWTVLQILQMALPSQFDCLG 723
            SLK++F+R+FLNK  AQQL MF++ +LP+PALLK+ C    WT LQILQ ALPS FDC+G
Sbjct: 498  SLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIG 557

Query: 724  ERFFISDGEILKVDFNKDILQSMFNDIISSVLFQMDSKEALNVFNSLQPLLMENLFLDGY 903
            ER +IS   ILKVD+N+D+LQS+ N+I++S+  +    E L  F+SLQPLLMENLF +G+
Sbjct: 558  ERHWISKSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGF 617

Query: 904  SVCLKDFYISKSVLGNLPRSIQEVSPLLRQLRSTYNELVELQVGNHLRNVKAPIVNFILK 1083
            SV L+DF I   V  N+ ++++++S LL  LRS YNEL++LQ  NHLR  K P+ NFIL 
Sbjct: 618  SVSLEDFSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILN 677

Query: 1084 SSGLGNLIDSKSESSINKVVEQMGFLGLQLADRGKFYSRNLVEDMTSLFLHKYAVNGVEC 1263
            SS LGNLIDSKS+S+INKVV+Q+GFLG QL+++GKFYSR LVE M  LF  KY  +G + 
Sbjct: 678  SSALGNLIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADY 737

Query: 1264 PSEAFGLIKSCFFHGLNPYEDLVHSISSREVLVRSSRGLTEP 1389
            PS  FGLI+SCFFHGL+PYE++VHSIS+RE++VRSSRGL+EP
Sbjct: 738  PSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEP 779


>ref|XP_002299208.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222846466|gb|EEE84013.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 842

 Score =  636 bits (1641), Expect = e-180
 Identities = 312/462 (67%), Positives = 384/462 (83%)
 Frame = +1

Query: 4    KGSGYCSRGVITGDAYKKVNEIGLPLEVAQRITFEEKVTECNKDHLQELVDKKLCLTYKD 183
            KGSG+ SR VITGDAY KVN++G+P E+AQRITFEE+V+  N  +LQELVD KLCLTY+D
Sbjct: 238  KGSGFSSRSVITGDAYTKVNQVGIPYEIAQRITFEERVSVHNMRYLQELVDNKLCLTYRD 297

Query: 184  GASMYSLREGSKGHTLLKVGQVVHRRIMDGDILFINRPPSTHKHSLQALSVYVHEDNTVK 363
            G+S YSLREGSKGHT L+ GQVVHRRI+DGD++FINRPP+THKHSLQALSVYVH+D+TVK
Sbjct: 298  GSSTYSLREGSKGHTFLRPGQVVHRRIIDGDVVFINRPPTTHKHSLQALSVYVHDDHTVK 357

Query: 364  INPLICGPLDADFDGDCVHLFYPQSLAARAEVVELFSVEQQLLSSHSGCLNLQLKNDSLL 543
            INPLICGPL ADFDGDCVHLFYPQSLAA+AEV+ELFSVE+QLLSSHSG LNLQL  DSLL
Sbjct: 358  INPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLTTDSLL 417

Query: 544  SLKIMFKRFFLNKVTAQQLAMFITTNLPQPALLKANCVASQWTVLQILQMALPSQFDCLG 723
            SLK++FK  FL+K  AQQLAMF++ +LPQPALLK NC+   WT  QILQMALP+ F+C G
Sbjct: 418  SLKMIFKACFLDKSAAQQLAMFVSPDLPQPALLKVNCIRPYWTAHQILQMALPTCFNCSG 477

Query: 724  ERFFISDGEILKVDFNKDILQSMFNDIISSVLFQMDSKEALNVFNSLQPLLMENLFLDGY 903
            ERF I++  +LKVDFN+D++ SM N+I+ S+ F+  S   L  FN+LQPLLMENLF +G+
Sbjct: 478  ERFLINNSNVLKVDFNRDVVASMINEILISIFFEKGSGAVLKFFNALQPLLMENLFSEGF 537

Query: 904  SVCLKDFYISKSVLGNLPRSIQEVSPLLRQLRSTYNELVELQVGNHLRNVKAPIVNFILK 1083
            SV LKDF IS++V  ++  S + +SPLL  LRSTYNELVELQV NH+++VK P++ FIL 
Sbjct: 538  SVSLKDFSISQAVKQSIQESFKVISPLLCNLRSTYNELVELQVENHIQDVKTPVLEFILT 597

Query: 1084 SSGLGNLIDSKSESSINKVVEQMGFLGLQLADRGKFYSRNLVEDMTSLFLHKYAVNGVEC 1263
            SS LG LIDSKS+ ++ K+V+Q+GFLGLQ++DRGK YS+ LVED+ S F  KY  N +  
Sbjct: 598  SSALGYLIDSKSDGAVAKLVQQIGFLGLQVSDRGKLYSKTLVEDLASHFQSKYPTNLLNY 657

Query: 1264 PSEAFGLIKSCFFHGLNPYEDLVHSISSREVLVRSSRGLTEP 1389
            PS  +GLI+S FFHGL+ YE++ HSIS+REV+VRSSRGL+EP
Sbjct: 658  PSAQYGLIQSSFFHGLDAYEEMAHSISTREVIVRSSRGLSEP 699


>ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222841357|gb|EEE78904.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 924

 Score =  633 bits (1632), Expect = e-179
 Identities = 315/462 (68%), Positives = 378/462 (81%)
 Frame = +1

Query: 4    KGSGYCSRGVITGDAYKKVNEIGLPLEVAQRITFEEKVTECNKDHLQELVDKKLCLTYKD 183
            KGSG+ SR VITGDAY  VN++G+P E+AQRITFEE+V+  N  +LQELVD KLCLTYKD
Sbjct: 320  KGSGFSSRSVITGDAYTLVNQVGIPYEIAQRITFEERVSVHNMRYLQELVDNKLCLTYKD 379

Query: 184  GASMYSLREGSKGHTLLKVGQVVHRRIMDGDILFINRPPSTHKHSLQALSVYVHEDNTVK 363
            G+S YSLREGSKGHT L+ GQVVHRRIMDGDI+FINRPP+THKHSLQALSVYVH+D+ VK
Sbjct: 380  GSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHAVK 439

Query: 364  INPLICGPLDADFDGDCVHLFYPQSLAARAEVVELFSVEQQLLSSHSGCLNLQLKNDSLL 543
            INPLICGPL ADFDGDCVHLFYPQSLAA+AEV+ELFSVE+QLLSSHSG LNLQL  DSLL
Sbjct: 440  INPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLTTDSLL 499

Query: 544  SLKIMFKRFFLNKVTAQQLAMFITTNLPQPALLKANCVASQWTVLQILQMALPSQFDCLG 723
            SLK+MFK  FL K  AQQLAMFI+  LPQPALLK NC    WT  QILQMALP+ F+C G
Sbjct: 500  SLKMMFKACFLGKSAAQQLAMFISPYLPQPALLKVNCFFPHWTAHQILQMALPACFNCSG 559

Query: 724  ERFFISDGEILKVDFNKDILQSMFNDIISSVLFQMDSKEALNVFNSLQPLLMENLFLDGY 903
            ERF I +   LKVDFN+D++ S+ N+I+ S+ F+  S   L  FNSLQP+LMENLF +G+
Sbjct: 560  ERFLIINSNFLKVDFNRDVVASVINEILISMFFEKGSGAVLKFFNSLQPMLMENLFSEGF 619

Query: 904  SVCLKDFYISKSVLGNLPRSIQEVSPLLRQLRSTYNELVELQVGNHLRNVKAPIVNFILK 1083
            SV L+DF IS++V   +P S + +SPLL  LRST+NELVELQV NH+R+VK P+  FIL 
Sbjct: 620  SVSLEDFSISRAVKQRIPESFKAISPLLCNLRSTFNELVELQVENHIRDVKQPVREFILT 679

Query: 1084 SSGLGNLIDSKSESSINKVVEQMGFLGLQLADRGKFYSRNLVEDMTSLFLHKYAVNGVEC 1263
            SS LG LIDSKS++++ KVV+Q+GFLGLQ++DRGK YS+ LVED+ S FL KY  N  + 
Sbjct: 680  SSALGYLIDSKSDAAVTKVVQQIGFLGLQVSDRGKLYSKTLVEDLASHFLSKYPANLFDY 739

Query: 1264 PSEAFGLIKSCFFHGLNPYEDLVHSISSREVLVRSSRGLTEP 1389
            PS  +GLI++ FFHGL+ YE++ HSIS+REV+VRSSRGL+EP
Sbjct: 740  PSAQYGLIQNSFFHGLDAYEEMAHSISTREVIVRSSRGLSEP 781


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  630 bits (1624), Expect = e-178
 Identities = 307/462 (66%), Positives = 382/462 (82%)
 Frame = +1

Query: 4    KGSGYCSRGVITGDAYKKVNEIGLPLEVAQRITFEEKVTECNKDHLQELVDKKLCLTYKD 183
            KGSG+ SR VITGDAYK VNEIG+P EVAQRITFEE+V+  N  +LQELVDKKLCLTY+D
Sbjct: 318  KGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKLCLTYRD 377

Query: 184  GASMYSLREGSKGHTLLKVGQVVHRRIMDGDILFINRPPSTHKHSLQALSVYVHEDNTVK 363
            G+S YSLREGS GHT LK GQ+VHRRIMDGDI+FINRPP+THKHSLQAL VY+H+D+ VK
Sbjct: 378  GSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHVVK 437

Query: 364  INPLICGPLDADFDGDCVHLFYPQSLAARAEVVELFSVEQQLLSSHSGCLNLQLKNDSLL 543
            INPLICGPL ADFDGDC+HLFYPQS+AA+AEV+ LFSVE+QLLSSHSG LNLQL NDSLL
Sbjct: 438  INPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLL 497

Query: 544  SLKIMFKRFFLNKVTAQQLAMFITTNLPQPALLKANCVASQWTVLQILQMALPSQFDCLG 723
            SLK+MF+++FL K  AQQLAMF+++ LP PALL     +  WT LQILQ  LP+ FDC G
Sbjct: 498  SLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFDCHG 557

Query: 724  ERFFISDGEILKVDFNKDILQSMFNDIISSVLFQMDSKEALNVFNSLQPLLMENLFLDGY 903
            + + I +   LK DF++D + S+ N+I++S+ FQ   +E L  F+SLQPLLME++F +G+
Sbjct: 558  DSYLIKNSNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGF 617

Query: 904  SVCLKDFYISKSVLGNLPRSIQEVSPLLRQLRSTYNELVELQVGNHLRNVKAPIVNFILK 1083
            SV L D+ +  + L  L ++IQ +SPLL QLRST+NELVELQ+ NHLR+VK P  NFILK
Sbjct: 618  SVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILK 677

Query: 1084 SSGLGNLIDSKSESSINKVVEQMGFLGLQLADRGKFYSRNLVEDMTSLFLHKYAVNGVEC 1263
             S LG L DSKSES+INKVV+Q+GFLGLQL+D+G+FYS++L+ED+ SLF ++Y+ + ++ 
Sbjct: 678  LSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDY 737

Query: 1264 PSEAFGLIKSCFFHGLNPYEDLVHSISSREVLVRSSRGLTEP 1389
            PS  FGL+K CFFHGL+PYE++VHSIS+REV+VRSSRGLTEP
Sbjct: 738  PSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEP 779