BLASTX nr result

ID: Aconitum21_contig00017004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00017004
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putativ...   391   e-106
ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2...   386   e-105
ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   381   e-103
ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicag...   375   e-102
ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   369   e-100

>ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533687|gb|EEF35422.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 603

 Score =  391 bits (1004), Expect = e-106
 Identities = 197/254 (77%), Positives = 220/254 (86%), Gaps = 6/254 (2%)
 Frame = -2

Query: 744 KQEEKKQ------EIFATCSFLSLGLQPALCDQLRDKMGFEGPTQVQARTIPVALAGRHV 583
           ++EE K+      E+FA+CSFL+LGL P LCDQLR++MGFE PT VQA+ IPV L+GRHV
Sbjct: 13  EEEEAKETKNNNPEMFASCSFLNLGLHPTLCDQLRERMGFEAPTTVQAQAIPVVLSGRHV 72

Query: 582 LVKAATGTGKTIAYLAPIIHHLIMYDPRIDRASGTYALVLVPTRELCMQVYEILQKLLQR 403
           LV AATGTGKT+AYLAPIIHHL  Y PRI+RA GT+ALVLVPTRELC+QVYEILQ LL R
Sbjct: 73  LVNAATGTGKTVAYLAPIIHHLQSYSPRIERAHGTFALVLVPTRELCLQVYEILQGLLHR 132

Query: 402 FHWIVPGYVMGGESRSKEKARLRKGISVLVATPGRLLDHIKNTTSFVHTNLRWIIFDEAD 223
           FHWIVPGY+MGGESRSKEKARLRKGIS+LVATPGRLLDH+KNT+SF HTNLRWIIFDEAD
Sbjct: 133 FHWIVPGYIMGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFSHTNLRWIIFDEAD 192

Query: 222 RILELGYGKEIEDILDLLGSTKEGSVGKEKSLSMNSQSQRQNLLLSATLNEKVNHLANIS 43
           RILELG+GKEIEDILDLLGS    SVGK    S  S  QRQNLLLSATLNEKVNHLANIS
Sbjct: 193 RILELGFGKEIEDILDLLGSRLTRSVGKGNRDSSISNYQRQNLLLSATLNEKVNHLANIS 252

Query: 42  LKDPVMIGIDEPKM 1
           L++PVMIG+D+ KM
Sbjct: 253 LENPVMIGLDDEKM 266


>ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score =  386 bits (992), Expect = e-105
 Identities = 190/247 (76%), Positives = 219/247 (88%)
 Frame = -2

Query: 741 QEEKKQEIFATCSFLSLGLQPALCDQLRDKMGFEGPTQVQARTIPVALAGRHVLVKAATG 562
           ++ +K EIFA+CSF +LGL P+LC+QL++++GFEGPT VQA+ IPV L+GRHVLV AATG
Sbjct: 10  KDNQKSEIFASCSFSALGLHPSLCNQLQERLGFEGPTLVQAQAIPVILSGRHVLVNAATG 69

Query: 561 TGKTIAYLAPIIHHLIMYDPRIDRASGTYALVLVPTRELCMQVYEILQKLLQRFHWIVPG 382
           TGKT+AYLAPIIHHL  Y  RIDR +GT+ALVLVPTRELC+QVYEILQKLL RFHWIVPG
Sbjct: 70  TGKTVAYLAPIIHHLHSYPSRIDRENGTFALVLVPTRELCLQVYEILQKLLHRFHWIVPG 129

Query: 381 YVMGGESRSKEKARLRKGISVLVATPGRLLDHIKNTTSFVHTNLRWIIFDEADRILELGY 202
           YVMGGE+RSKEKARLRKGIS+LVATPGRLLDH+KNT SFVHTNLRWIIFDEADRILELG+
Sbjct: 130 YVMGGENRSKEKARLRKGISILVATPGRLLDHLKNTASFVHTNLRWIIFDEADRILELGF 189

Query: 201 GKEIEDILDLLGSTKEGSVGKEKSLSMNSQSQRQNLLLSATLNEKVNHLANISLKDPVMI 22
           GKEIE+ILDLLGS + GSVG    +S  S  Q QNLLLSATLNEKVNHLA ISL++PVMI
Sbjct: 190 GKEIEEILDLLGSRQIGSVGNGNQVSSLSNFQGQNLLLSATLNEKVNHLAKISLENPVMI 249

Query: 21  GIDEPKM 1
           G+D+ K+
Sbjct: 250 GLDDKKI 256


>ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
           vinifera]
          Length = 600

 Score =  381 bits (979), Expect = e-103
 Identities = 191/243 (78%), Positives = 216/243 (88%)
 Frame = -2

Query: 729 KQEIFATCSFLSLGLQPALCDQLRDKMGFEGPTQVQARTIPVALAGRHVLVKAATGTGKT 550
           + EIFA+CSF SLGL P LCDQLR++MGFE PT VQA  IPV LAGRHVLV AATGTGKT
Sbjct: 23  ESEIFASCSFSSLGLHPTLCDQLRERMGFEVPTIVQAEAIPVILAGRHVLVNAATGTGKT 82

Query: 549 IAYLAPIIHHLIMYDPRIDRASGTYALVLVPTRELCMQVYEILQKLLQRFHWIVPGYVMG 370
           IAYLAP+I+HL  YDPRI+R++GT+ALVLVPTRELCMQVYEILQKLL RFHWIVPGYVMG
Sbjct: 83  IAYLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQVYEILQKLLHRFHWIVPGYVMG 142

Query: 369 GESRSKEKARLRKGISVLVATPGRLLDHIKNTTSFVHTNLRWIIFDEADRILELGYGKEI 190
           GE+RSKEKARLRKGIS+LVATPGRLLDH+KNT+SF+HTNLRWIIFDEADRILELG+GKEI
Sbjct: 143 GENRSKEKARLRKGISILVATPGRLLDHLKNTSSFLHTNLRWIIFDEADRILELGFGKEI 202

Query: 189 EDILDLLGSTKEGSVGKEKSLSMNSQSQRQNLLLSATLNEKVNHLANISLKDPVMIGIDE 10
           E+ILDLLGS   G   +E +++  S+ QRQNLLLSATLNEKVNHLA ISL++PV IG+D 
Sbjct: 203 EEILDLLGSRTNGPTIREDAVT--SEFQRQNLLLSATLNEKVNHLAQISLENPVTIGLDG 260

Query: 9   PKM 1
            KM
Sbjct: 261 KKM 263


>ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355507445|gb|AES88587.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 613

 Score =  375 bits (964), Expect = e-102
 Identities = 186/250 (74%), Positives = 214/250 (85%)
 Frame = -2

Query: 750 TNKQEEKKQEIFATCSFLSLGLQPALCDQLRDKMGFEGPTQVQARTIPVALAGRHVLVKA 571
           TNK +     +FA+CSF SLGL   LCDQLR++MGFE PT +QA+ IPV L+GRH LV A
Sbjct: 30  TNKGDNNNN-VFASCSFSSLGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNA 88

Query: 570 ATGTGKTIAYLAPIIHHLIMYDPRIDRASGTYALVLVPTRELCMQVYEILQKLLQRFHWI 391
           ATGTGKTIAYLAPIIHHL  YD R+ R+ GT+ALVLVPTRELC+QV+EILQKLL RFHWI
Sbjct: 89  ATGTGKTIAYLAPIIHHLQSYDKRVQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWI 148

Query: 390 VPGYVMGGESRSKEKARLRKGISVLVATPGRLLDHIKNTTSFVHTNLRWIIFDEADRILE 211
           VPGY+MGGESRSKEKARLRKGIS+L+ATPGRLLDH+KNT+SFV+TNLRWIIFDEADRILE
Sbjct: 149 VPGYIMGGESRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILE 208

Query: 210 LGYGKEIEDILDLLGSTKEGSVGKEKSLSMNSQSQRQNLLLSATLNEKVNHLANISLKDP 31
           LG+GKEI++IL+LLGS K G   +E  +   S+ QRQNLLLSATLNEKVNHLA ISL+DP
Sbjct: 209 LGFGKEIQEILNLLGSMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKVNHLAKISLEDP 268

Query: 30  VMIGIDEPKM 1
           VMIGID+  M
Sbjct: 269 VMIGIDDKIM 278


>ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           17-like [Glycine max]
          Length = 596

 Score =  369 bits (947), Expect = e-100
 Identities = 180/249 (72%), Positives = 214/249 (85%)
 Frame = -2

Query: 747 NKQEEKKQEIFATCSFLSLGLQPALCDQLRDKMGFEGPTQVQARTIPVALAGRHVLVKAA 568
           NK      ++FA+CSF SLGL   LC+QLRD++GFE PT VQA+ IPV L+GRH LV AA
Sbjct: 12  NKGNGANNDVFASCSFSSLGLDSNLCEQLRDRLGFEVPTLVQAQAIPVILSGRHALVNAA 71

Query: 567 TGTGKTIAYLAPIIHHLIMYDPRIDRASGTYALVLVPTRELCMQVYEILQKLLQRFHWIV 388
           TGTGKT+AYLAPIIHHL  Y+ RI R+ GT+ALVLVPTRELC+QVYEILQKLL RFHWIV
Sbjct: 72  TGTGKTVAYLAPIIHHLQGYENRIQRSDGTFALVLVPTRELCLQVYEILQKLLHRFHWIV 131

Query: 387 PGYVMGGESRSKEKARLRKGISVLVATPGRLLDHIKNTTSFVHTNLRWIIFDEADRILEL 208
           PGY+MGGE RSKEK+RLRKGIS+L+ATPGRLLDH+KNTT+F+++NLRWIIFDEADRILEL
Sbjct: 132 PGYIMGGEKRSKEKSRLRKGISILIATPGRLLDHLKNTTAFLYSNLRWIIFDEADRILEL 191

Query: 207 GYGKEIEDILDLLGSTKEGSVGKEKSLSMNSQSQRQNLLLSATLNEKVNHLANISLKDPV 28
           G+GK+IE+ILDLLGS K+G   +E ++  +S+ QRQNLLLSATLNEKVNHLA +SL +PV
Sbjct: 192 GFGKDIEEILDLLGSRKKGHGDQENTVLTHSKIQRQNLLLSATLNEKVNHLAKMSLDNPV 251

Query: 27  MIGIDEPKM 1
           MIG+D  KM
Sbjct: 252 MIGLDGKKM 260


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