BLASTX nr result

ID: Aconitum21_contig00016927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016927
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22123.1| polyprotein [Prunus avium]                             191   4e-47
gb|ABG22121.1| polyprotein [Solanum melongena]                        179   3e-43
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          177   1e-42
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   176   2e-42
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             175   3e-42

>gb|ABG22123.1| polyprotein [Prunus avium]
          Length = 276

 Score =  191 bits (486), Expect = 4e-47
 Identities = 95/127 (74%), Positives = 107/127 (84%), Gaps = 4/127 (3%)
 Frame = +1

Query: 1   MVCTRPDISQAVSVVSRYMANPGKKHWEAVKWVLRYLKGTSDVGLCFGGDS----CLVSG 168
           MVCTRPDISQAVS+VSRYM NPGK HW+AVKW+LRY+ GT DVGL F  D     C+V G
Sbjct: 116 MVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLLFQQDKVSGQCVV-G 174

Query: 169 FVDSDYAGDLDRRRSTTGYVFRIQGAPVSWRSMVQHTVALSTTEAEYMAVAEAVKEALWL 348
           +VDSDYAGDLD+RRSTTG+VF I G PVSWRS++Q TVALSTTEAEYMAV EA+KEA+WL
Sbjct: 175 YVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWL 234

Query: 349 GGLLGDL 369
            GLL DL
Sbjct: 235 QGLLDDL 241


>gb|ABG22121.1| polyprotein [Solanum melongena]
          Length = 361

 Score =  179 bits (453), Expect = 3e-43
 Identities = 88/126 (69%), Positives = 102/126 (80%), Gaps = 3/126 (2%)
 Frame = +1

Query: 1   MVCTRPDISQAVSVVSRYMANPGKKHWEAVKWVLRYLKGTSDVGLCFGGDSCL---VSGF 171
           MVCTR DISQAVSVVSRYM +PGK HW+AVKW+LRY+K T D+GL F  D  L   V G+
Sbjct: 201 MVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKNTVDIGLVFEQDKSLGSCVVGY 260

Query: 172 VDSDYAGDLDRRRSTTGYVFRIQGAPVSWRSMVQHTVALSTTEAEYMAVAEAVKEALWLG 351
            DSDYAGDLD+RRSTTGY+F +   PVSW+S +Q TVALSTTEAEYMA+ EAVKEA+WL 
Sbjct: 261 CDSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVALSTTEAEYMAITEAVKEAIWLH 320

Query: 352 GLLGDL 369
           GLL +L
Sbjct: 321 GLLEEL 326


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  177 bits (448), Expect = 1e-42
 Identities = 88/126 (69%), Positives = 102/126 (80%), Gaps = 3/126 (2%)
 Frame = +1

Query: 1   MVCTRPDISQAVSVVSRYMANPGKKHWEAVKWVLRYLKGTSDVGLCFG---GDSCLVSGF 171
           MVCTRPDISQAVS+VSRYM NPGK  W AVKW+LRYL GT DVGL F    G  C+  G+
Sbjct: 89  MVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLFKKNCGQQCV--GY 146

Query: 172 VDSDYAGDLDRRRSTTGYVFRIQGAPVSWRSMVQHTVALSTTEAEYMAVAEAVKEALWLG 351
            DSD+AGDLD++RST+GYVF + G  VSWRS++Q T+ALSTTEAEY+A  EAVKEA+WL 
Sbjct: 147 CDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLK 206

Query: 352 GLLGDL 369
           GLLGDL
Sbjct: 207 GLLGDL 212


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/124 (66%), Positives = 103/124 (83%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1    MVCTRPDISQAVSVVSRYMANPGKKHWEAVKWVLRYLKGTSDVGLCFGGDS-CLVSGFVD 177
            MVCTRPD++ AVSVVSR+M  PG++HW+AVK + RYL+GTSDVGL +GGD+ CLV+G+ D
Sbjct: 1103 MVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTGYSD 1162

Query: 178  SDYAGDLDRRRSTTGYVFRIQGAPVSWRSMVQHTVALSTTEAEYMAVAEAVKEALWLGGL 357
            SDYAGD+D RRS TGYVF + G+ VSW++ +Q TV LSTTEAEYMA+ EA KE +WL GL
Sbjct: 1163 SDYAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGIWLKGL 1222

Query: 358  LGDL 369
            + DL
Sbjct: 1223 VSDL 1226


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  175 bits (444), Expect = 3e-42
 Identities = 80/123 (65%), Positives = 100/123 (81%)
 Frame = +1

Query: 1    MVCTRPDISQAVSVVSRYMANPGKKHWEAVKWVLRYLKGTSDVGLCFGGDSCLVSGFVDS 180
            M+CTRPDI+QAV VVSRYMANPG++HW  VK +LRY+KGTSDV LC+GG   +++G+VDS
Sbjct: 1092 MICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVALCYGGSDFIINGYVDS 1151

Query: 181  DYAGDLDRRRSTTGYVFRIQGAPVSWRSMVQHTVALSTTEAEYMAVAEAVKEALWLGGLL 360
            DYAGDLD+ +STTGYVF++ G  VSW S +Q  VA STTEAEY+A  +A KEA+WL  LL
Sbjct: 1152 DYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYVAATQASKEAIWLKMLL 1211

Query: 361  GDL 369
             +L
Sbjct: 1212 EEL 1214