BLASTX nr result
ID: Aconitum21_contig00016927
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Aconitum21_contig00016927 (371 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABG22123.1| polyprotein [Prunus avium] 191 4e-47 gb|ABG22121.1| polyprotein [Solanum melongena] 179 3e-43 gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 177 1e-42 gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 176 2e-42 dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 175 3e-42 >gb|ABG22123.1| polyprotein [Prunus avium] Length = 276 Score = 191 bits (486), Expect = 4e-47 Identities = 95/127 (74%), Positives = 107/127 (84%), Gaps = 4/127 (3%) Frame = +1 Query: 1 MVCTRPDISQAVSVVSRYMANPGKKHWEAVKWVLRYLKGTSDVGLCFGGDS----CLVSG 168 MVCTRPDISQAVS+VSRYM NPGK HW+AVKW+LRY+ GT DVGL F D C+V G Sbjct: 116 MVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLLFQQDKVSGQCVV-G 174 Query: 169 FVDSDYAGDLDRRRSTTGYVFRIQGAPVSWRSMVQHTVALSTTEAEYMAVAEAVKEALWL 348 +VDSDYAGDLD+RRSTTG+VF I G PVSWRS++Q TVALSTTEAEYMAV EA+KEA+WL Sbjct: 175 YVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWL 234 Query: 349 GGLLGDL 369 GLL DL Sbjct: 235 QGLLDDL 241 >gb|ABG22121.1| polyprotein [Solanum melongena] Length = 361 Score = 179 bits (453), Expect = 3e-43 Identities = 88/126 (69%), Positives = 102/126 (80%), Gaps = 3/126 (2%) Frame = +1 Query: 1 MVCTRPDISQAVSVVSRYMANPGKKHWEAVKWVLRYLKGTSDVGLCFGGDSCL---VSGF 171 MVCTR DISQAVSVVSRYM +PGK HW+AVKW+LRY+K T D+GL F D L V G+ Sbjct: 201 MVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKNTVDIGLVFEQDKSLGSCVVGY 260 Query: 172 VDSDYAGDLDRRRSTTGYVFRIQGAPVSWRSMVQHTVALSTTEAEYMAVAEAVKEALWLG 351 DSDYAGDLD+RRSTTGY+F + PVSW+S +Q TVALSTTEAEYMA+ EAVKEA+WL Sbjct: 261 CDSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVALSTTEAEYMAITEAVKEAIWLH 320 Query: 352 GLLGDL 369 GLL +L Sbjct: 321 GLLEEL 326 >gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] Length = 297 Score = 177 bits (448), Expect = 1e-42 Identities = 88/126 (69%), Positives = 102/126 (80%), Gaps = 3/126 (2%) Frame = +1 Query: 1 MVCTRPDISQAVSVVSRYMANPGKKHWEAVKWVLRYLKGTSDVGLCFG---GDSCLVSGF 171 MVCTRPDISQAVS+VSRYM NPGK W AVKW+LRYL GT DVGL F G C+ G+ Sbjct: 89 MVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLFKKNCGQQCV--GY 146 Query: 172 VDSDYAGDLDRRRSTTGYVFRIQGAPVSWRSMVQHTVALSTTEAEYMAVAEAVKEALWLG 351 DSD+AGDLD++RST+GYVF + G VSWRS++Q T+ALSTTEAEY+A EAVKEA+WL Sbjct: 147 CDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLK 206 Query: 352 GLLGDL 369 GLLGDL Sbjct: 207 GLLGDL 212 >gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1| copia LTR rider [Solanum lycopersicum] Length = 1307 Score = 176 bits (446), Expect = 2e-42 Identities = 82/124 (66%), Positives = 103/124 (83%), Gaps = 1/124 (0%) Frame = +1 Query: 1 MVCTRPDISQAVSVVSRYMANPGKKHWEAVKWVLRYLKGTSDVGLCFGGDS-CLVSGFVD 177 MVCTRPD++ AVSVVSR+M PG++HW+AVK + RYL+GTSDVGL +GGD+ CLV+G+ D Sbjct: 1103 MVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTGYSD 1162 Query: 178 SDYAGDLDRRRSTTGYVFRIQGAPVSWRSMVQHTVALSTTEAEYMAVAEAVKEALWLGGL 357 SDYAGD+D RRS TGYVF + G+ VSW++ +Q TV LSTTEAEYMA+ EA KE +WL GL Sbjct: 1163 SDYAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGIWLKGL 1222 Query: 358 LGDL 369 + DL Sbjct: 1223 VSDL 1226 >dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] Length = 1298 Score = 175 bits (444), Expect = 3e-42 Identities = 80/123 (65%), Positives = 100/123 (81%) Frame = +1 Query: 1 MVCTRPDISQAVSVVSRYMANPGKKHWEAVKWVLRYLKGTSDVGLCFGGDSCLVSGFVDS 180 M+CTRPDI+QAV VVSRYMANPG++HW VK +LRY+KGTSDV LC+GG +++G+VDS Sbjct: 1092 MICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVALCYGGSDFIINGYVDS 1151 Query: 181 DYAGDLDRRRSTTGYVFRIQGAPVSWRSMVQHTVALSTTEAEYMAVAEAVKEALWLGGLL 360 DYAGDLD+ +STTGYVF++ G VSW S +Q VA STTEAEY+A +A KEA+WL LL Sbjct: 1152 DYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYVAATQASKEAIWLKMLL 1211 Query: 361 GDL 369 +L Sbjct: 1212 EEL 1214