BLASTX nr result

ID: Aconitum21_contig00016890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016890
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26636.3| unnamed protein product [Vitis vinifera]              145   2e-33
ref|XP_002300476.1| predicted protein [Populus trichocarpa] gi|2...   133   3e-30
ref|XP_003617545.1| RING finger family protein [Medicago truncat...   133   1e-29
ref|XP_003617542.1| RING finger family protein [Medicago truncat...   130   1e-28
ref|NP_001065202.1| Os10g0544600 [Oryza sativa Japonica Group] g...   126   2e-27

>emb|CBI26636.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  145 bits (366), Expect(2) = 2e-33
 Identities = 64/118 (54%), Positives = 83/118 (70%)
 Frame = -2

Query: 427 ILSSLLNGKVFREWVSPAVFKAYQWQIAALENSHMEITDLYEVDGIKGLSQSYIKKLPKV 248
           +L SL+NGKVF EWVSPAV KAYQWQI+ LE ++ E  D Y + G KGL  ++I+KLPK 
Sbjct: 141 LLCSLVNGKVFMEWVSPAVLKAYQWQISTLETNYGETEDFYNISGAKGLPHNFIEKLPKS 200

Query: 247 SLSSTETMVQCGETPCSICLQDFKNGECARRLPRCKHLFHLNCIDGWLVIQGSCPICR 74
           +   +   +   E  C+ICLQDFK+GE  R LP C+H FH+ C+D WL + GSCP+CR
Sbjct: 201 NFCHSNAEMY-NEISCTICLQDFKDGEMTRGLPSCRHYFHMECVDQWLTLHGSCPMCR 257



 Score = 21.9 bits (45), Expect(2) = 2e-33
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 477 AIELFESVMNGDSASKTYLV 418
           A++L ESV  G+S SK  L+
Sbjct: 123 ALQLLESVAAGESLSKAALL 142


>ref|XP_002300476.1| predicted protein [Populus trichocarpa] gi|222847734|gb|EEE85281.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  133 bits (335), Expect(2) = 3e-30
 Identities = 66/131 (50%), Positives = 85/131 (64%), Gaps = 12/131 (9%)
 Frame = -2

Query: 427 ILSSLLNGKVFREWVSPAVFKAYQWQIAALENSHMEITDLYEVDGIKGLSQSYIKKLPKV 248
           +L SLLNGKVF EWV PAV KAYQWQ+ ALE ++ EI+D+Y+   ++GLS+  IKKLP+ 
Sbjct: 109 LLHSLLNGKVFMEWVGPAVLKAYQWQVNALETTYREISDIYDTSEVRGLSEDCIKKLPEC 168

Query: 247 SLSSTETMV-QCGETPCSICL-----------QDFKNGECARRLPRCKHLFHLNCIDGWL 104
              S   +V QC   P  + L           QDFK+G+  R+LPRC H FHL+C+D WL
Sbjct: 169 IFKSDSNIVEQC--CPALVVLFACRFLTKKFCQDFKDGDSMRKLPRCGHYFHLSCLDKWL 226

Query: 103 VIQGSCPICRD 71
              GSCP CR+
Sbjct: 227 ATNGSCPNCRN 237



 Score = 23.1 bits (48), Expect(2) = 3e-30
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 477 AIELFESVMNGDSASKTYLV 418
           A++L ES+ NG+  SK  L+
Sbjct: 91  AVQLLESITNGEPLSKVALL 110


>ref|XP_003617545.1| RING finger family protein [Medicago truncatula]
           gi|355518880|gb|AET00504.1| RING finger family protein
           [Medicago truncatula]
          Length = 236

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/119 (53%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
 Frame = -2

Query: 427 ILSSLLNGKVFREWVSPAVFKAYQWQIAALENSHMEI-TDLYEVDGIKGLSQSYIKKLPK 251
           +L SLLNGKVF EW+ P V +AY + I +LE ++  + +D+Y+  G+KG+ QS I KLP 
Sbjct: 109 LLRSLLNGKVFMEWICPTVAQAYLFYINSLETAYGAVLSDIYDDLGVKGMQQSCIMKLPC 168

Query: 250 VSLSSTETMVQCGETPCSICLQDFKNGECARRLPRCKHLFHLNCIDGWLVIQGSCPICR 74
              SS + M    E+ CSIC+QDF+N E  R LP+C H+FHL CID WLV QGSCPICR
Sbjct: 169 QQFSSNKMMKLYNESCCSICIQDFENEELVRLLPKCSHIFHLECIDKWLVQQGSCPICR 227


>ref|XP_003617542.1| RING finger family protein [Medicago truncatula]
           gi|355518877|gb|AET00501.1| RING finger family protein
           [Medicago truncatula]
          Length = 245

 Score =  130 bits (326), Expect = 1e-28
 Identities = 66/136 (48%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
 Frame = -2

Query: 478 SYRVV*IGDEW*FGVKDILSSLLNGKVFREWVSPAVFKAYQWQIAALENSHMEI-TDLYE 302
           S+  V +G+   F    +L SLLNGKVF EW+ P V +AY + I +LE  +  + +D+Y+
Sbjct: 103 SFAYVAVGEP--FSKVALLRSLLNGKVFTEWICPTVAEAYLFYINSLETGYEGVLSDMYD 160

Query: 301 VDGIKGLSQSYIKKLPKVSLSSTETMVQCGETPCSICLQDFKNGECARRLPRCKHLFHLN 122
             G+KG+  S I KLP     S + M    E+ CSICLQDF+N E  R LP+C H+FHL 
Sbjct: 161 NMGVKGMPHSCIMKLPFQQFCSNKMMKLYNESCCSICLQDFENEELVRILPKCSHIFHLE 220

Query: 121 CIDGWLVIQGSCPICR 74
           CID WL+ QGSCPICR
Sbjct: 221 CIDKWLIQQGSCPICR 236


>ref|NP_001065202.1| Os10g0544600 [Oryza sativa Japonica Group]
           gi|13357247|gb|AAK20044.1|AC025783_4 hypothetical
           protein [Oryza sativa Japonica Group]
           gi|31433346|gb|AAP54875.1| Zinc finger, C3HC4 type
           family protein, expressed [Oryza sativa Japonica Group]
           gi|113639811|dbj|BAF27116.1| Os10g0544600 [Oryza sativa
           Japonica Group] gi|215692678|dbj|BAG88098.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215740757|dbj|BAG97413.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767394|dbj|BAG99622.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218184958|gb|EEC67385.1| hypothetical protein
           OsI_34527 [Oryza sativa Indica Group]
          Length = 233

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
 Frame = -2

Query: 430 DILSSLLNGKVFREWVSPAVFKAYQWQIAALENSHMEITDLYEVDGIKGLSQSYIKKLPK 251
           DI+SSLL+G++ RE V PAV  A Q QI+A+ +   E +DL+E  G KGL    +++LP 
Sbjct: 111 DIISSLLSGRLVREKVGPAVQSAVQSQISAISSPFAETSDLFETGGTKGLPADTLRRLPA 170

Query: 250 VSLSSTETMVQCGETPC-SICLQDFKNGECARRLPRCKHLFHLNCIDGWLVIQGSCPICR 74
           + ++    +   GE  C S+CLQDF+ GE ARRLP C+H+FH+ CID WLV  GSCP+CR
Sbjct: 171 IKITGDNAVDSAGEPICCSVCLQDFRVGEMARRLPSCRHVFHVPCIDCWLVRHGSCPLCR 230


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