BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016652
         (2094 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              559   e-157
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   538   e-150
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              453   e-125
ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s...   427   e-117
ref|XP_002321920.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  559 bits (1441), Expect = e-157
 Identities = 302/538 (56%), Positives = 384/538 (71%), Gaps = 6/538 (1%)
 Frame = -3

Query: 1888 MVGQYGIKLALNLIQNHFGTRVTKVCECLLRKGTLTLREIAGFTELDPNPVKNAEKIKNC 1709
            M  QYG++LA++LI +HFG  V KVC+CLLRKGTLTL  +  FTEL P      +++K+C
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPP------QQVKSC 54

Query: 1708 LLVLIQHNCVQPFSFKNQDGEEDPPKDV-HYTVNFDNIIHRMRFPKFLAIVTERLDKECA 1532
            +LVLIQHNCVQ F+ + + G  + P+ V  Y   F NI+HRMRF KFLAIV+E LDKEC 
Sbjct: 55   ILVLIQHNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECE 114

Query: 1531 ELFEGLLQHGRLTLDQCILRALSNRIEGDIAVQDAIRENFGKLVNARYVERSP--DAVSS 1358
            E+ EGLLQHGRLTL+Q + RA SN+ EG+  VQDA+RE+F KLV A +VER P  +   +
Sbjct: 115  EILEGLLQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLA 174

Query: 1357 PKLQGNPSTGRRGAKSAKFVE-PVTVEEQAILAAIP--SERFLLITNSGTDVNSEDNTLA 1187
            P  +      +RGAKSAK VE P T+E++AI AA P  ++RF +I N+GTDV+   N  A
Sbjct: 175  PPSEEETPARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDDSPNVTA 234

Query: 1186 KPPTGAVGEKRKIDTLGTDEGTTAMINEKEILWRANFEEFVRHLRHKACVSSVRSRYDDG 1007
                   GEKRK D L  D+ T A   EK++LWRANFEEFVR LRHKAC+++V++R DDG
Sbjct: 235  -------GEKRKQDALELDKETGASC-EKDVLWRANFEEFVRCLRHKACIANVKTRLDDG 286

Query: 1006 AGTVLSAMLEATKKAEQKVKVESSVPLSTDALFEEVIKNEEGRTMTIEHVEGILTQLGCD 827
            A  VLSAMLEAT+  E+KVK E+SVPLS D +FE V+K+E GR+MT+E V G L QLGC 
Sbjct: 287  AAIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCA 346

Query: 826  QSQIGKEDSCSVDLRNIIEIAQNEEVESLVLKRYGKDAYKIFRLLSKEDKLMETDKISDT 647
                G  +S SVDL+NIIE+AQN+EVES+ LKRYG+DAY+IFRLLSK  +L+ETDKISDT
Sbjct: 347  PCVRGAAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDT 406

Query: 646  AFVEKADARRLLYNLWKDDYLHMEKVGSQASAYSQYFLWKVNKRLVRENAFDEMCXXXXX 467
             FVEK D  ++LY LWKD+YL MEK+    S  SQ+ LWKV K  +  +  +EM      
Sbjct: 407  TFVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALN 466

Query: 466  XXXXXXXXXEQEREILQLPRDKRVGAQGKRHERIRKVNILMESSLMMIDDALLLFHEF 293
                     EQE+EI+QLPR+KRVGA G R ER+RKV IL+ESSLM +DDA++LF++F
Sbjct: 467  LSLRVAYELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 524


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
            vinifera]
          Length = 511

 Score =  538 bits (1386), Expect = e-150
 Identities = 296/537 (55%), Positives = 375/537 (69%), Gaps = 5/537 (0%)
 Frame = -3

Query: 1888 MVGQYGIKLALNLIQNHFGTRVTKVCECLLRKGTLTLREIAGFTELDPNPVKNAEKIKNC 1709
            M  QYG++LA++LI +HFG  V KVC+CLLRKGTLTL  +  FTEL P      +++K+C
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPP------QQVKSC 54

Query: 1708 LLVLIQHNCVQPFSFKNQDGEEDPPKDVHYTVNFDNIIHRMRFPKFLAIVTERLDKECAE 1529
            +LVLIQHNCVQ F+ +    +E P     Y   F NI+HRMRF KFLAIV+E LDKEC E
Sbjct: 55   ILVLIQHNCVQAFAIQ----QEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEE 110

Query: 1528 LFEGLLQHGRLTLDQCILRALSNRIEGDIAVQDAIRENFGKLVNARYVERSP--DAVSSP 1355
            + EGLLQHGRLTL+Q + RA SN+ E    VQDA+RE+F KLV A +VER P  +   +P
Sbjct: 111  ILEGLLQHGRLTLEQILDRAKSNQREP--VVQDALRESFLKLVRAHFVERCPASEPFLAP 168

Query: 1354 KLQGNPSTGRRGAKSAKFVE-PVTVEEQAILAAIP--SERFLLITNSGTDVNSEDNTLAK 1184
              +      +RGAKSAK VE P T+E++AI AA P  ++RF +I N+GTDV+   N    
Sbjct: 169  PSEEETPARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDDSPN---- 224

Query: 1183 PPTGAVGEKRKIDTLGTDEGTTAMINEKEILWRANFEEFVRHLRHKACVSSVRSRYDDGA 1004
                     RK D L  D+ T A   EK++LWRANFEEFVR LRHKAC+++V++R DDGA
Sbjct: 225  ---------RKQDALELDKETGASC-EKDVLWRANFEEFVRCLRHKACIANVKTRLDDGA 274

Query: 1003 GTVLSAMLEATKKAEQKVKVESSVPLSTDALFEEVIKNEEGRTMTIEHVEGILTQLGCDQ 824
              VLSAMLEAT+  E+KVK E+SVPLS D +FE V+K+E GR+MT+E V G L QLGC  
Sbjct: 275  AIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAP 334

Query: 823  SQIGKEDSCSVDLRNIIEIAQNEEVESLVLKRYGKDAYKIFRLLSKEDKLMETDKISDTA 644
               G  +S SVDL+NIIE+AQN+EVES+ LKRYG+DAY+IFRLLSK  +L+ETDKISDT 
Sbjct: 335  CVRGAAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTT 394

Query: 643  FVEKADARRLLYNLWKDDYLHMEKVGSQASAYSQYFLWKVNKRLVRENAFDEMCXXXXXX 464
            FVEK D  ++LY LWKD+YL MEK+    S  SQ+ LWKV K  +  +  +EM       
Sbjct: 395  FVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNL 454

Query: 463  XXXXXXXXEQEREILQLPRDKRVGAQGKRHERIRKVNILMESSLMMIDDALLLFHEF 293
                    EQE+EI+QLPR+KRVGA G R ER+RKV IL+ESSLM +DDA++LF++F
Sbjct: 455  SLRVAYELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 511


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  453 bits (1166), Expect = e-125
 Identities = 258/538 (47%), Positives = 348/538 (64%), Gaps = 6/538 (1%)
 Frame = -3

Query: 1888 MVGQYGIKLALNLIQNHFGTRVTKVCECLLRKGTLTLREIAGFTELDPNPVKNAEKIKNC 1709
            M  +YGIKLA++LI   FG    KVC+CLLRKGTL L +I    +L P      +++K  
Sbjct: 1    MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSP------QQVKTY 54

Query: 1708 LLVLIQHNCVQPFSFKNQDG-EEDPPKDVHYTVNFDNIIHRMRFPKFLAIVTERLDKECA 1532
            L VLIQHNCVQ F+ +++ G  E P     Y + FDNI+HRMRFPK LAIV++ LDKEC 
Sbjct: 55   LKVLIQHNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECE 114

Query: 1531 ELFEGLLQHGRLTLDQCILRALSNRIEGDIAVQDAIRENFGKLVNARYVER--SPDAVSS 1358
            ELFE  L+HG LTL Q + R  SN+ EG+  VQDA+R +F KLVNA YVER  +PD    
Sbjct: 115  ELFEAFLKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLV 174

Query: 1357 PKLQGNPSTGRRGAKSAKFVEPVTVEEQAILA-AIPSER--FLLITNSGTDVNSEDNTLA 1187
            P  +      +  A SAK VE + + EQ  +A A PS+   F +IT++  D+N  D ++ 
Sbjct: 175  PPDEEKTPARKHDANSAKAVEELEIGEQCDIAKATPSKAKGFPVITDTCGDING-DKSIG 233

Query: 1186 KPPTGAVGEKRKIDTLGTDEGTTAMINEKEILWRANFEEFVRHLRHKACVSSVRSRYDDG 1007
             PP   +G+KRK D L  D  + A  +EK++ WRAN++E V HLRHKAC+ +VR+R D G
Sbjct: 234  NPPGVVIGKKRKQDALKLDTESGAA-SEKDVPWRANYKELVCHLRHKACIENVRARLDSG 292

Query: 1006 AGTVLSAMLEATKKAEQKVKVESSVPLSTDALFEEVIKNEEGRTMTIEHVEGILTQLGCD 827
            A  VLSAMLEAT+ AE+ VK E SV LS   + E V+++E G +MT+E +   L QLGC 
Sbjct: 293  AAIVLSAMLEATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTLERIRASLVQLGCH 352

Query: 826  QSQIGKEDSCSVDLRNIIEIAQNEEVESLVLKRYGKDAYKIFRLLSKEDKLMETDKISDT 647
             + +G + + ++DL+ IIE+AQN+EVES+VLKRYG++A++IFRLLSK    +ET KISDT
Sbjct: 353  PNGVGADRTYNIDLKKIIELAQNDEVESMVLKRYGREAHRIFRLLSKSCCPLETTKISDT 412

Query: 646  AFVEKADARRLLYNLWKDDYLHMEKVGSQASAYSQYFLWKVNKRLVRENAFDEMCXXXXX 467
             F+EK +A ++LY LWKD+ LHMEK+    S  SQ+ LWKV K     +  DEM      
Sbjct: 413  TFIEKKEAAKILYKLWKDECLHMEKIVLNESRQSQFMLWKVKKDTFWRHILDEMYHAALN 472

Query: 466  XXXXXXXXXEQEREILQLPRDKRVGAQGKRHERIRKVNILMESSLMMIDDALLLFHEF 293
                         +I++L RDK VGA  +R  R+    IL+++SLM +DDAL+LFH+F
Sbjct: 473  LSI----------QIIELRRDKHVGALRERDVRLA---ILLQASLMKLDDALMLFHDF 517


>ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 518

 Score =  427 bits (1098), Expect = e-117
 Identities = 246/543 (45%), Positives = 345/543 (63%), Gaps = 11/543 (2%)
 Frame = -3

Query: 1888 MVGQYGIKLALNLIQNHFGTRVTKVCECLLRKGTLTLREIAGFTELDPNPVKNAEKIKNC 1709
            MV ++GIK  ++LI  HFG  V KVCE L   G LTL ++  +T+         ++++N 
Sbjct: 1    MVTEHGIKFGVHLITKHFGKIVAKVCEKLFSHGPLTLDQLVRYTDF------TKDQVRNS 54

Query: 1708 LLVLIQHNCVQPFSFKNQDGEEDPPK---DVHYTVNFDNIIHRMRFPKFLAIVTERLDKE 1538
            LLVL+QHNC Q F    QD ++D  +      Y V FDNIIHR+RFPKFL IV+ +LD+E
Sbjct: 55   LLVLVQHNCAQAFVSAPQDDDDDADRLRVRTQYLVLFDNIIHRLRFPKFLDIVSRKLDEE 114

Query: 1537 CAELFEGLLQHGRLTLDQCILRALSNRIEGDIAVQDAIRENFGKLVNARYVER--SPDAV 1364
            C +L  GLL+ GRLTL Q + R    + E  +  +  +RE   KL+ AR+VER  +P+ V
Sbjct: 115  CVKLLVGLLRDGRLTLKQMVDRESQGK-ENAVPTK-VVRETLCKLLTARFVERCPAPEPV 172

Query: 1363 SSPKLQGNPSTGRRGAKSAKFVE-PVTVEEQAILAAIPSE--RFLLITNSGTDVNSEDNT 1193
             S   +   +T +RGAKSAK  E P T+E++ + AA+P +  RF L  N G++V+ E N+
Sbjct: 173  VSTSFK-ETTTKKRGAKSAKIFEAPETLEQRVVDAAVPGDVIRFSLTANMGSNVDRETNS 231

Query: 1192 LAKPPTGAVGEKRKIDTLGTDEGTTAMINEKEILWRANFEEFVRHLRHKACVSSVRSRYD 1013
               P      +  K               E++ILWRANFEEF+RHLRHK  + +VR+++D
Sbjct: 232  DDVPMISVEEDVAK---------------EEQILWRANFEEFIRHLRHKVLIENVRTQHD 276

Query: 1012 DGAGTVLSAMLEATKKAEQKVKVESSVPLSTDALFEEVIKNEEGRTMTIEHVEGILTQLG 833
            DG  TVLSA+LEAT   E+KVK+++SVPLS D +  EV+K + GRTMTI+ +   L QLG
Sbjct: 277  DGTATVLSAVLEATGSVEKKVKMDNSVPLSLDTIITEVMKTDTGRTMTIDRIRASLVQLG 336

Query: 832  CDQSQIGKEDSCSVDLRNIIEIAQNEEVESLVLKRYGKDAYKIFRLLSKEDKLMETDKIS 653
            C  S I +E  C +DL+ IIE A+NEEVES+VLKRYG+DAY++FRLL+K+    +TD+I+
Sbjct: 337  CSPSMILEESYC-IDLKKIIEPARNEEVESIVLKRYGRDAYRMFRLLAKDCCFHDTDQIA 395

Query: 652  DTAFVEKADARRLLYNLWKDDYLHMEKVGSQASAYS-QYFLWKVNKRLVRENAFDEMCXX 476
             +  VEK +A +LLY LWKD+YL+MEKVG+ A A      +WKVNK L+ E   DEM   
Sbjct: 396  ASTLVEKKEASKLLYKLWKDNYLYMEKVGATAGAKQITILMWKVNKPLLWEYVLDEMYHA 455

Query: 475  XXXXXXXXXXXXEQEREILQLPRDK--RVGAQGKRHERIRKVNILMESSLMMIDDALLLF 302
                        E++ E+L++P+DK    G   K+++R+  V +LM SSL+ +DDAL+LF
Sbjct: 456  ALNLSLRMAFEQEKDEELLKVPKDKLREPGPLQKKYKRLLNVRLLMGSSLLKLDDALMLF 515

Query: 301  HEF 293
            H+F
Sbjct: 516  HDF 518


>ref|XP_002321920.1| predicted protein [Populus trichocarpa] gi|222868916|gb|EEF06047.1|
            predicted protein [Populus trichocarpa]
          Length = 519

 Score =  421 bits (1081), Expect = e-115
 Identities = 236/538 (43%), Positives = 344/538 (63%), Gaps = 7/538 (1%)
 Frame = -3

Query: 1885 VGQYGIKLALNLIQNHFGTRVTKVCECLLRKGTLTLREIAGFTELDPNPVKNAEKIKNCL 1706
            V QYGIK A+++I NHFG  V KVC+CLL+KG L LREI  +TEL    V+N      CL
Sbjct: 1    VSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRN------CL 54

Query: 1705 LVLIQHNCVQPFSFKNQDGEEDPPK-DVHYTVNFDNIIHRMRFPKFLAIVTERLDKECAE 1529
            LVLIQHNC+QPF  + + G  +  K    Y V FDN++HR+RF KF+AIV++  DK C +
Sbjct: 55   LVLIQHNCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVD 114

Query: 1528 LFEGLLQHGRLTLDQCILRALSNRIEGDIAVQDAIRENFGKLVNARYVERSPDA---VSS 1358
            L E LLQHGRL+ +Q           G +   +A++EN  KLV ARYVER P +   ++ 
Sbjct: 115  LIETLLQHGRLSSEQIFDGFRDRSSSGGM---EALQENMHKLVMARYVERCPISEPFLAL 171

Query: 1357 PKLQGNPSTGRRGAKSAK-FVEPVTVEEQAILAAIPSERFLLITNSGTDVNSEDNTLAKP 1181
            P  +      RRGAKSAK F+EP T+E++ ++AA+P E          ++ ++ + +   
Sbjct: 172  PSEEEAAPVRRRGAKSAKAFLEPETLEQRVLVAAVPPEGMRFSFELNPEIGADRDKVENN 231

Query: 1180 PTGAVGEKRKIDTLGTD-EGTTAMINEKEILWRANFEEFVRHLRHKACVSSVRSRYDDGA 1004
             +  +G+KRK+D L +D +G  A  +++  LWR NFEEF+R LRHK C+ +VR+R DD A
Sbjct: 232  SSSNIGDKRKLDALESDIDGGVA--DKQVALWRVNFEEFIRRLRHKICIETVRTRLDDEA 289

Query: 1003 GTVLSAMLEATKKAEQKVKVESSVPLSTDALFEEVIKNEEGRTMTIEHVEGILTQLGCDQ 824
             TV +AML+A++  E+K+K  SSVPLS ++++ EVIK+E+GR MT+++V  +L  L    
Sbjct: 290  ATVFTAMLDASRSEEKKIKTASSVPLSENSIYAEVIKSEKGRNMTLDYVISVLVGLSSSP 349

Query: 823  SQIGKED-SCSVDLRNIIEIAQNEEVESLVLKRYGKDAYKIFRLLSKEDKLMETDKISDT 647
              +   D S S+D ++ IE+AQ +  ES+V K+YGKDAY++FRLLSK  +L+ETDKISD+
Sbjct: 350  PFVRVVDNSYSIDFKHTIEVAQTD--ESIVYKKYGKDAYRMFRLLSKAGRLLETDKISDS 407

Query: 646  AFVEKADARRLLYNLWKDDYLHMEKVGSQASAYSQYFLWKVNKRLVRENAFDEMCXXXXX 467
             F+EK +   +L  +W+ DYL MEK+    +  +Q+ LWKVN   +RE   D+M      
Sbjct: 408  IFLEKKETANILSKMWQGDYLQMEKL---IAGPTQFLLWKVNMINLRERVLDDMFHAALN 464

Query: 466  XXXXXXXXXEQEREILQLPRDKRVGAQGKRHERIRKVNILMESSLMMIDDALLLFHEF 293
                     EQ++EIL L  D   G   +++E+++KV  L+ESS M +DDA+++FH+F
Sbjct: 465  LSLRVAYELEQQKEILHLGVD---GPMKEKYEKLKKVRFLLESSRMKLDDAIMIFHDF 519