BLASTX nr result

ID: Aconitum21_contig00016574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016574
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32617.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   150   1e-34
ref|XP_002326329.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thal...   149   3e-34
ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   148   4e-34

>emb|CBI32617.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/136 (53%), Positives = 93/136 (68%)
 Frame = -1

Query: 415 KKMHTELRLPVLALTDSTPRAFKSLLFYGTGSENMYGRSDQKLITPAIRWLGLRPTDSEM 236
           +KM TEL+LPVLAL DS P   K L  YG GS+NM       L TP I+WLG+RP+D + 
Sbjct: 329 RKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNM-SYDSANLTTPDIKWLGIRPSDLDK 387

Query: 235 LDLSRGCRLPMTKKDIKIAQDMLNQDIVKRNPFWLYELESMADQKHKVEIEALGSLGYTY 56
             +   CRLPMT++DIK  +D+L +D VK+NP W+ EL  M   K K EI+AL S G+ Y
Sbjct: 388 YSIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQY 447

Query: 55  LTNVYLPLKLQERDWL 8
           L+ VYLPLKLQ++DWL
Sbjct: 448 LSEVYLPLKLQQQDWL 463


>ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
          Length = 420

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/136 (53%), Positives = 93/136 (68%)
 Frame = -1

Query: 415 KKMHTELRLPVLALTDSTPRAFKSLLFYGTGSENMYGRSDQKLITPAIRWLGLRPTDSEM 236
           +KM TEL+LPVLAL DS P   K L  YG GS+NM       L TP I+WLG+RP+D + 
Sbjct: 286 RKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNM-SYDSANLTTPDIKWLGIRPSDLDK 344

Query: 235 LDLSRGCRLPMTKKDIKIAQDMLNQDIVKRNPFWLYELESMADQKHKVEIEALGSLGYTY 56
             +   CRLPMT++DIK  +D+L +D VK+NP W+ EL  M   K K EI+AL S G+ Y
Sbjct: 345 YSIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQY 404

Query: 55  LTNVYLPLKLQERDWL 8
           L+ VYLPLKLQ++DWL
Sbjct: 405 LSEVYLPLKLQQQDWL 420


>ref|XP_002326329.1| predicted protein [Populus trichocarpa] gi|222833522|gb|EEE71999.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score =  150 bits (378), Expect = 1e-34
 Identities = 73/136 (53%), Positives = 93/136 (68%)
 Frame = -1

Query: 415 KKMHTELRLPVLALTDSTPRAFKSLLFYGTGSENMYGRSDQKLITPAIRWLGLRPTDSEM 236
           +KM TEL+LPVLAL DS P   K L  YG GS+NM       L TP I+WLG+RP+D + 
Sbjct: 289 RKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNM-SYDSANLTTPDIKWLGIRPSDLDK 347

Query: 235 LDLSRGCRLPMTKKDIKIAQDMLNQDIVKRNPFWLYELESMADQKHKVEIEALGSLGYTY 56
             +   CRLPMT++DIK  +D+L +D VK+NP W+ EL  M   K K EI+AL S G+ Y
Sbjct: 348 YKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQY 407

Query: 55  LTNVYLPLKLQERDWL 8
           L+ VYLPLKLQ++DWL
Sbjct: 408 LSEVYLPLKLQQQDWL 423


>ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
           gi|297806215|ref|XP_002870991.1| hypothetical protein
           ARALYDRAFT_487058 [Arabidopsis lyrata subsp. lyrata]
           gi|75335684|sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA
           topoisomerase 6 subunit A; Short=AtTOP6A; AltName:
           Full=Meiotic recombination protein SPO11-3;
           Short=AtSPO11-3; AltName: Full=Protein BRASSINOSTEROID
           INSENSITIVE 5; AltName: Full=Protein ROOT HAIRLESS 2
           gi|15488539|gb|AAL01152.1|AF323679_1 putative
           topoisomerase VI subunit A [Arabidopsis thaliana]
           gi|7413557|emb|CAB86036.1| meiosis specific-like protein
           [Arabidopsis thaliana] gi|12331186|emb|CAC24689.1|
           topoisomerase 6 subunit A [Arabidopsis thaliana]
           gi|114213517|gb|ABI54341.1| At5g02820 [Arabidopsis
           thaliana] gi|297316828|gb|EFH47250.1| hypothetical
           protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
           lyrata] gi|332003139|gb|AED90522.1| DNA topoisomerase 6
           subunit A [Arabidopsis thaliana]
          Length = 427

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/136 (53%), Positives = 92/136 (67%)
 Frame = -1

Query: 415 KKMHTELRLPVLALTDSTPRAFKSLLFYGTGSENMYGRSDQKLITPAIRWLGLRPTDSEM 236
           +KM  EL+LPVLAL DS P   K L  YG GS+NM       L TP I+WLG+RP+D + 
Sbjct: 293 RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNM-SYDSANLTTPDIKWLGIRPSDLDK 351

Query: 235 LDLSRGCRLPMTKKDIKIAQDMLNQDIVKRNPFWLYELESMADQKHKVEIEALGSLGYTY 56
             +   CRLPMT++DIK  +DML +D VK+NP W+ EL  M   K K EI+AL S G+ Y
Sbjct: 352 YKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQY 411

Query: 55  LTNVYLPLKLQERDWL 8
           L+ VYLPLKLQ++DWL
Sbjct: 412 LSEVYLPLKLQQQDWL 427


>ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
          Length = 417

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/136 (52%), Positives = 93/136 (68%)
 Frame = -1

Query: 415 KKMHTELRLPVLALTDSTPRAFKSLLFYGTGSENMYGRSDQKLITPAIRWLGLRPTDSEM 236
           +KM TEL+LPVLAL DS P   K L  YG GS+NM       L TP I+WLG+RP+D + 
Sbjct: 283 RKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNM-SYDSANLTTPDIKWLGVRPSDLDK 341

Query: 235 LDLSRGCRLPMTKKDIKIAQDMLNQDIVKRNPFWLYELESMADQKHKVEIEALGSLGYTY 56
             +   CRLPMT++DIK  +D+L +D VK+NP W+ EL  M   K K EI+AL + G+ Y
Sbjct: 342 YKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSTFGFQY 401

Query: 55  LTNVYLPLKLQERDWL 8
           L+ VYLPLKLQ++DWL
Sbjct: 402 LSEVYLPLKLQQKDWL 417


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