BLASTX nr result
ID: Aconitum21_contig00016530
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00016530
(478 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera] 94 2e-29
emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera] 101 5e-29
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 130 8e-29
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] 129 3e-28
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 127 9e-28
>emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]
Length = 776
Score = 94.4 bits (233), Expect(2) = 2e-29
Identities = 47/106 (44%), Positives = 62/106 (58%)
Frame = +1
Query: 1 TEAGCSMILRDVRHVPDMRLNLISAGKLDDDGYRNIFDRGEWKLSRGSLLVAKGKKCCSL 180
T GC M+ +DVRHVP+M +LIS GK DD+GY + G++ +L
Sbjct: 422 TSIGCKMVFKDVRHVPEMCFSLISIGKFDDEGYHSHL----------------GEEKNTL 465
Query: 181 YKASMRIGGSEINATTGELSSELWHKRLGHISEKGLEILAKKNVLP 318
YK R+ E+N E S+ELWHKRL HISEKGL++L +K LP
Sbjct: 466 YKTKARLVKGEVNIVENEASTELWHKRLSHISEKGLQVLTRKKFLP 511
Score = 60.1 bits (144), Expect(2) = 2e-29
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +3
Query: 324 KGTHLEKCTSCLLGKQTRVSFKSKPSRKKEDILELVHTDVCGPMHVKSIGG 476
KGT L CT CL GKQ+RV+F PSR+K DIL+LVH DVC M ++GG
Sbjct: 513 KGTSLLPCTHCLSGKQSRVAFHKFPSRRKPDILDLVHFDVC-TMQSNTLGG 562
>emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]
Length = 761
Score = 101 bits (251), Expect(2) = 5e-29
Identities = 47/106 (44%), Positives = 67/106 (63%)
Frame = +1
Query: 1 TEAGCSMILRDVRHVPDMRLNLISAGKLDDDGYRNIFDRGEWKLSRGSLLVAKGKKCCSL 180
T C ++++ VRHVP+M +LIS KLDD+GY + +WK + GSL++A+GKK +
Sbjct: 168 TSIRCKLVMKYVRHVPEMHFSLISVRKLDDEGYHSHLGESKWKXTXGSLVLARGKKNNTF 227
Query: 181 YKASMRIGGSEINATTGELSSELWHKRLGHISEKGLEILAKKNVLP 318
YK R+ E+N E + LWHK LG ISE GL++L K +LP
Sbjct: 228 YKIEARLVKGEVNIVENEAFTXLWHKWLGXISENGLQVLVIKKLLP 273
Score = 51.6 bits (122), Expect(2) = 5e-29
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +3
Query: 306 KCVTKAKGTHLEKCTSCLLGKQTRVSFKSKPSRKKEDILELVHTDVCGPMHVKSIGG 476
K + KG + CT CL KQ+RV+F PSR+K +IL+LVH DVC M ++GG
Sbjct: 269 KKLLPVKGMXILPCTHCLSRKQSRVAFCRFPSRRKPNILDLVHIDVC-TMQSNTLGG 324
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 130 bits (328), Expect = 8e-29
Identities = 65/124 (52%), Positives = 87/124 (70%)
Frame = +1
Query: 1 TEAGCSMILRDVRHVPDMRLNLISAGKLDDDGYRNIFDRGEWKLSRGSLLVAKGKKCCSL 180
T G + L++V+H+PD+R+NLIS GKLDD+G+ NIF +WKL+RGS+++AKG K SL
Sbjct: 222 TSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFYNIFRDSQWKLTRGSMVIAKGNKSSSL 281
Query: 181 YKASMRIGGSEINATTGELSSELWHKRLGHISEKGLEILAKKNVLPKLKVHT*RNAQAAC 360
Y R+ S INA + + ELWH RLGH+SEKGL ILAKKN+L +K + + A C
Sbjct: 282 YLMQTRVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSGMKKGSLKRC-AHC 340
Query: 361 LASK 372
LA K
Sbjct: 341 LAGK 344
Score = 61.6 bits (148), Expect = 6e-08
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +3
Query: 279 KGARDTSQEKCVTKAKGTHLEKCTSCLLGKQTRVSFKSKPSRKKEDILELVHTDVCGPMH 458
KG +++ ++ K L++C CL GKQTRV+FK+ +K +L+LV++DVCGPM
Sbjct: 315 KGLMILAKKNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRYTRKPGMLDLVYSDVCGPMK 374
Query: 459 VKSIGG 476
K++GG
Sbjct: 375 TKTLGG 380
>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 129 bits (323), Expect = 3e-28
Identities = 64/124 (51%), Positives = 85/124 (68%)
Frame = +1
Query: 1 TEAGCSMILRDVRHVPDMRLNLISAGKLDDDGYRNIFDRGEWKLSRGSLLVAKGKKCCSL 180
T G + L++V+H+PD+R+NLIS GKLDD+G+ N F +WKL+RGS+ +AKG K SL
Sbjct: 206 TSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFXNTFRDSQWKLTRGSMXIAKGNKSSSL 265
Query: 181 YKASMRIGGSEINATTGELSSELWHKRLGHISEKGLEILAKKNVLPKLKVHT*RNAQAAC 360
Y R+ S INA + + ELWH RLGH+SEKGL ILAKKN+L +K + + A C
Sbjct: 266 YLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSXMKKGSLKRC-AHC 324
Query: 361 LASK 372
LA K
Sbjct: 325 LAGK 328
Score = 56.2 bits (134), Expect = 3e-06
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +3
Query: 279 KGARDTSQEKCVTKAKGTHLEKCTSCLLGKQTRVSFKSKPSRKKEDILELVHTDVCGPMH 458
KG +++ ++ K L++C CL GK TRV+FK+ +K +L+LV+ DVCGPM
Sbjct: 299 KGLMILAKKNLLSXMKKGSLKRCAHCLAGKXTRVAFKTLHHTRKPGMLDLVYFDVCGPMK 358
Query: 459 VKSIGG 476
K++ G
Sbjct: 359 TKTLXG 364
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 127 bits (319), Expect = 9e-28
Identities = 64/137 (46%), Positives = 92/137 (67%)
Frame = +1
Query: 1 TEAGCSMILRDVRHVPDMRLNLISAGKLDDDGYRNIFDRGEWKLSRGSLLVAKGKKCCSL 180
T GC+++L+DVRHVPD+R+NLIS LD DGY + F +W+L++GSL++AKG +L
Sbjct: 342 TNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTL 401
Query: 181 YKASMRIGGSEINATTGELSSELWHKRLGHISEKGLEILAKKNVLPKLKVHT*RNAQAAC 360
Y+ + I E+NA E+S +LWHKR+GH+SEKGL+ILAKK+++ K T + C
Sbjct: 402 YRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCD-YC 460
Query: 361 LASKLEFLSKVNQAERK 411
L K +S +ERK
Sbjct: 461 LFGKQHRVSFQTSSERK 477
Score = 66.2 bits (160), Expect = 3e-09
Identities = 31/66 (46%), Positives = 49/66 (74%)
Frame = +3
Query: 279 KGARDTSQEKCVTKAKGTHLEKCTSCLLGKQTRVSFKSKPSRKKEDILELVHTDVCGPMH 458
KG + +++ ++ AKGT ++ C CL GKQ RVSF++ S +K +IL+LV++DVCGPM
Sbjct: 435 KGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTS-SERKLNILDLVYSDVCGPME 493
Query: 459 VKSIGG 476
++S+GG
Sbjct: 494 IESMGG 499