BLASTX nr result

ID: Aconitum21_contig00016428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016428
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521085.1| DNA binding protein, putative [Ricinus commu...    60   5e-07
ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Popu...    60   7e-07
ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...    57   4e-06

>ref|XP_002521085.1| DNA binding protein, putative [Ricinus communis]
            gi|223539654|gb|EEF41236.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2009

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 42/126 (33%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
 Frame = +3

Query: 15   QSQPTVHRIPQQNCPVNSDSSLQSPVDQNQVDQEPPTNTFHMAT-------------LXX 155
            Q+QPTV R+ QQN  +NSD   +S  DQ   +++P  +   M T                
Sbjct: 1810 QAQPTVQRMLQQNRQLNSDLQTKSQTDQGHKEKQPLNSVPQMGTSTTTSVSQACNDSANV 1869

Query: 156  XXXXXXXXXTHWKAQEPLSGLSTPNAASHMA--GNSSLPSSLGSEPVTLPNQGPIQRQSS 329
                     + WK  EP    +  N+AS +   G+  L +S GSEPV+  NQ   QRQ S
Sbjct: 1870 VPVVTSSVASQWKPLEPSCDSAMTNSASQVGSIGSPPLTNSAGSEPVSSVNQALGQRQLS 1929

Query: 330  GGMPIH 347
            GG+  H
Sbjct: 1930 GGLTQH 1935


>ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Populus trichocarpa]
            gi|222844768|gb|EEE82315.1| hypothetical protein
            POPTRDRAFT_756271 [Populus trichocarpa]
          Length = 2006

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 16/130 (12%)
 Frame = +3

Query: 12   SQSQPTVHRIPQQNCPVNSDSSLQSPVDQNQVDQEPPTNTFHMATLXXXXXXXXXXXT-- 185
            SQ QPTV R+ QQ+  +NSD   +   DQ   DQ+   N     T            T  
Sbjct: 1804 SQPQPTVQRMLQQSRLLNSDLPTKPQTDQGHADQQTSNNISQTGTSTSTGMPLACNDTSN 1863

Query: 186  -----------HWKAQEPL---SGLSTPNAASHMAGNSSLPSSLGSEPVTLPNQGPIQRQ 323
                        WK+ EP    SG++   +     G+  L S+ GSE V   +QG + RQ
Sbjct: 1864 VAPVVSSVSEMQWKSSEPSLHDSGMADTASKVGPIGSPPLTSAAGSEQVVPVSQGSVHRQ 1923

Query: 324  SSGGMPIHTY 353
             SGG+P+H +
Sbjct: 1924 LSGGLPLHCH 1933


>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
 Frame = +3

Query: 18   SQPTVHRIPQQNCPVNSDSSLQSPVDQNQVDQEPPTNTFHMAT-------LXXXXXXXXX 176
            +QP V R+ Q N   NSD + +S  DQ + D +P  NT  M+T       +         
Sbjct: 1828 TQPHVQRMLQPNRQANSDRASKSQTDQARADPQPVNNTSQMSTTAVSQAGMESSTMVSTA 1887

Query: 177  XXTHWKAQEPL------SGLSTPNAASHMAGNSSLPSSLGSEPVTLPNQGPIQRQSSGGM 338
              + WKA E        SG++ P       G+ S+ SS G E V     GP+QRQ SG +
Sbjct: 1888 SASQWKAPESYKESLYDSGITNPATQVGSIGSPSMTSSAGGESVP-SISGPVQRQLSGNL 1946

Query: 339  P 341
            P
Sbjct: 1947 P 1947


Top