BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016138
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li...   128   6e-28
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-li...   117   7e-25
gb|ACU18895.1| unknown [Glycine max]                                  117   7e-25
ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago t...   117   1e-24
emb|CBI32318.3| unnamed protein product [Vitis vinifera]              115   4e-24

>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
          Length = 330

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/98 (63%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
 Frame = -3

Query: 405 FIWVGEHVEVRDAMVEDQEKKQDQQNN-ASTRDLMGIEEQEKTYTPIETRQIICRIANAI 229
           FIWVGEHVE +  ++EDQ  K +Q N  +S+   M +EEQE+TYT +ETRQ ICRIANA+
Sbjct: 214 FIWVGEHVEAKGILIEDQTDKAEQLNTKSSSSTFMSLEEQERTYTSLETRQNICRIANAV 273

Query: 228 RVLSSLGFNLTVELILDTVEVSISLNLDIHEMLGAEFY 115
           RVL++LGF++TVE+I +TV +S SLNLDIHEMLG+EFY
Sbjct: 274 RVLANLGFSVTVEVIKETVNLSSSLNLDIHEMLGSEFY 311


>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-like [Glycine max]
          Length = 327

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/96 (56%), Positives = 75/96 (78%)
 Frame = -3

Query: 405 FIWVGEHVEVRDAMVEDQEKKQDQQNNASTRDLMGIEEQEKTYTPIETRQIICRIANAIR 226
           FIWVGEHVE +D M+EDQ  + D Q     ++ + +EEQEK YT +ETR+ I R ANA+R
Sbjct: 213 FIWVGEHVEAKDDMIEDQVSQSDSQVLFPNKNCVSLEEQEKNYTILETRKYISRAANAVR 272

Query: 225 VLSSLGFNLTVELILDTVEVSISLNLDIHEMLGAEF 118
           VLS+LGFN+T+E+I   +++S+S+NLDIH+MLG+EF
Sbjct: 273 VLSTLGFNITLEIIKGIIDLSLSMNLDIHDMLGSEF 308


>gb|ACU18895.1| unknown [Glycine max]
          Length = 199

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/96 (56%), Positives = 75/96 (78%)
 Frame = -3

Query: 405 FIWVGEHVEVRDAMVEDQEKKQDQQNNASTRDLMGIEEQEKTYTPIETRQIICRIANAIR 226
           FIWVGEHVE +D M+EDQ  + D Q     ++ + +EEQEK YT +ETR+ I R ANA+R
Sbjct: 85  FIWVGEHVEAKDDMIEDQVSQSDSQVLFPNKNCVSLEEQEKNYTILETRKYISRAANAVR 144

Query: 225 VLSSLGFNLTVELILDTVEVSISLNLDIHEMLGAEF 118
           VLS+LGFN+T+E+I   +++S+S+NLDIH+MLG+EF
Sbjct: 145 VLSTLGFNITLEIIKGIIDLSLSMNLDIHDMLGSEF 180


>ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago truncatula]
           gi|217074186|gb|ACJ85453.1| unknown [Medicago
           truncatula] gi|355510788|gb|AES91930.1| Exosome complex
           exonuclease RRP4 [Medicago truncatula]
           gi|388516977|gb|AFK46550.1| unknown [Medicago
           truncatula]
          Length = 327

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/96 (58%), Positives = 73/96 (76%)
 Frame = -3

Query: 405 FIWVGEHVEVRDAMVEDQEKKQDQQNNASTRDLMGIEEQEKTYTPIETRQIICRIANAIR 226
           FIWVGEHVEVRD MVEDQ  + D Q     ++ + +EEQEK YT +ETR+ ICR ANA+R
Sbjct: 213 FIWVGEHVEVRDDMVEDQVNQSDPQVLTPNKNSVSLEEQEKKYTALETRKYICRAANAVR 272

Query: 225 VLSSLGFNLTVELILDTVEVSISLNLDIHEMLGAEF 118
            LS+LGF +T E+I   +++S+S NLDIH+MLG+EF
Sbjct: 273 GLSTLGFIITSEIIKGVIDLSLSANLDIHDMLGSEF 308


>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/97 (58%), Positives = 74/97 (76%)
 Frame = -3

Query: 405 FIWVGEHVEVRDAMVEDQEKKQDQQNNASTRDLMGIEEQEKTYTPIETRQIICRIANAIR 226
           FIWVGEHVE +  ++EDQ  K +Q N  S++         +TYT +ETRQ ICRIANA+R
Sbjct: 214 FIWVGEHVEAKGILIEDQTDKAEQLNTKSSK---------RTYTSLETRQNICRIANAVR 264

Query: 225 VLSSLGFNLTVELILDTVEVSISLNLDIHEMLGAEFY 115
           VL++LGF++TVE+I +TV +S SLNLDIHEMLG+EFY
Sbjct: 265 VLANLGFSVTVEVIKETVNLSSSLNLDIHEMLGSEFY 301