BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016081
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...   195   6e-48
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   193   2e-47
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     192   5e-47
gb|AAO23092.1| putative polyprotein [Oryza sativa Japonica Group...   191   8e-47
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group...   190   2e-46

>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score =  195 bits (495), Expect = 6e-48
 Identities = 87/197 (44%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
 Frame = +2

Query: 5    PLL*CIRPEETEKLLEEIHSGVCGGHQASRTLADRIIFTGYYWPTLRKDSETYSRSCSAC 184
            PLL C+  EE  K++ EIH G+CG HQA R++A ++I  G YWPT+ KD+E Y ++C AC
Sbjct: 1601 PLLKCVTREEGMKMVVEIHEGLCGAHQAPRSVASKVIRQGIYWPTIMKDTEKYIKTCKAC 1660

Query: 185  QKFADVPRAPATMQTPVVASWPFDIWGLDLIGPFKKGRGGVTHLIVAVDYFTKWIEAKPI 364
            QKF  + +AP     P+   WPF  WG+D++GP  + +G +  +IVA++YF++WIEA+ +
Sbjct: 1661 QKFGPMTKAPPKELQPIPLVWPFYRWGIDIVGPLPRAKGDLRFVIVAIEYFSRWIEAEAV 1720

Query: 365  ASLTQENVLNFIHDNIWCRFGIPRVFVSDHGSQFKS-YFTEECEKLGIKILKSSVAYPQG 541
            A +T   V  F+  N+ CRFGIP+  V D+G QF+S  F + C+ L ++I  +SV +PQ 
Sbjct: 1721 ARITSAAVQKFVWKNVICRFGIPKEIVCDNGKQFESGKFQDMCKGLNLQINFASVGHPQT 1780

Query: 542  NGQAEAGNKKILDILRK 592
            NG  E  N KI++ ++K
Sbjct: 1781 NGAVERANGKIMEAIKK 1797


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  193 bits (490), Expect = 2e-47
 Identities = 87/197 (44%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
 Frame = +2

Query: 5    PLL*CIRPEETEKLLEEIHSGVCGGHQASRTLADRIIFTGYYWPTLRKDSETYSRSCSAC 184
            PLL C+  EE  K++ EIH G+CG HQA R++A ++I  G YWPT+ KD+E Y ++C AC
Sbjct: 1619 PLLKCVTREEGMKMVVEIHEGLCGAHQAPRSVASKVIRQGIYWPTIMKDTEKYIKTCKAC 1678

Query: 185  QKFADVPRAPATMQTPVVASWPFDIWGLDLIGPFKKGRGGVTHLIVAVDYFTKWIEAKPI 364
            QKF  + +AP     P+   WPF  WG+D++ P  + +G +  +IVA++YF++WIEA+ +
Sbjct: 1679 QKFGPMTKAPPKELQPIPPVWPFYRWGIDIVSPLPRAKGDLRFVIVAIEYFSRWIEAEAV 1738

Query: 365  ASLTQENVLNFIHDNIWCRFGIPRVFVSDHGSQFKS-YFTEECEKLGIKILKSSVAYPQG 541
            A +T   V  F+  NI CRFGIP+  V D+G QF+S  F + C+ L ++I  +SV +PQ 
Sbjct: 1739 ARITSAAVQKFVWKNIICRFGIPKEIVCDNGKQFESGKFQDMCKGLNLQINFASVGHPQT 1798

Query: 542  NGQAEAGNKKILDILRK 592
            NG  E  N KI++ ++K
Sbjct: 1799 NGAVERANGKIMEAIKK 1815


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  192 bits (487), Expect = 5e-47
 Identities = 96/198 (48%), Positives = 126/198 (63%), Gaps = 1/198 (0%)
 Frame = +2

Query: 2    KPLL*CIRPEETEKLLEEIHSGVCGGHQASRTLADRIIFTGYYWPTLRKDSETYSRSCSA 181
            +PLL C+ P +   +L EIH G+CG H  +RTLAD+ +  GY+WPT+ +DS   ++ C  
Sbjct: 941  RPLLKCVGPADAGLILTEIHDGICGHHMGARTLADKALRAGYFWPTMLEDSRAKTKKCKN 1000

Query: 182  CQKFADVPRAPATMQTPVVASWPFDIWGLDLIGPFKKGRGGVTHLIVAVDYFTKWIEAKP 361
            CQ  A V  AP+    PV++  PF  WG+DL+GPF    GG  +LIVAVDYFTKW+EA  
Sbjct: 1001 CQMHAPVIHAPSRDLQPVLSPLPFAQWGMDLLGPFPTASGGRKYLIVAVDYFTKWVEAVA 1060

Query: 362  IASLTQENVLNFIHDNIWCRFGIPRVFVSDHGSQFKSYFTEE-CEKLGIKILKSSVAYPQ 538
            + + T   V   I +NI  RFG+P+V V DHG +F S       E+LGIK   SSV +PQ
Sbjct: 1061 VPAKTTAAVRKVIWENIITRFGLPQVMVFDHGREFWSDMVMNWLEELGIKFAYSSVCHPQ 1120

Query: 539  GNGQAEAGNKKILDILRK 592
             NGQAEA NK IL+ L+K
Sbjct: 1121 SNGQAEAANKTILNGLKK 1138


>gb|AAO23092.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709049|gb|ABF96844.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 658

 Score =  191 bits (485), Expect = 8e-47
 Identities = 91/198 (45%), Positives = 126/198 (63%), Gaps = 1/198 (0%)
 Frame = +2

Query: 2   KPLL*CIRPEETEKLLEEIHSGVCGGHQASRTLADRIIFTGYYWPTLRKDSETYSRSCSA 181
           +PLL CI   E E++  EIH G+CG HQA+RT+A ++   G YWPT+ K      + C +
Sbjct: 297 QPLLRCISFAEGEEMAREIHQGLCGAHQAARTVASKVFREGVYWPTVLKVCAEQIKKCES 356

Query: 182 CQKFADVPRAPATMQTPVVASWPFDIWGLDLIGPFKKGRGGVTHLIVAVDYFTKWIEAKP 361
           CQ+      AP     P+   WPF  WGLD+IGPF   R G   +IVA++YF++WIEA+P
Sbjct: 357 CQRHGRSQSAPHYNLQPIAPIWPFARWGLDIIGPFSVARNGYKFVIVAIEYFSRWIEAEP 416

Query: 362 IASLTQENVLNFIHDNIWCRFGIPRVFVSDHGSQFKS-YFTEECEKLGIKILKSSVAYPQ 538
           + ++T   V  F+  NI CRFG+P+ F++D+G QF S  F E CE L ++I  +SVA+PQ
Sbjct: 417 LGAITSAAVQKFVWKNIICRFGVPKEFITDNGKQFDSDKFREMCEGLNLEIRFASVAHPQ 476

Query: 539 GNGQAEAGNKKILDILRK 592
            NG AE  N KIL+ L+K
Sbjct: 477 SNGAAERTNGKILEALKK 494


>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1459

 Score =  190 bits (482), Expect = 2e-46
 Identities = 85/197 (43%), Positives = 129/197 (65%), Gaps = 1/197 (0%)
 Frame = +2

Query: 5    PLL*CIRPEETEKLLEEIHSGVCGGHQASRTLADRIIFTGYYWPTLRKDSETYSRSCSAC 184
            PLL C+  EE  +++ EIH G+CG HQA R++A ++I  G YWPT+ KD+E Y ++C AC
Sbjct: 1098 PLLKCVTKEEGMQMVVEIHEGICGAHQAPRSVASKVIRQGIYWPTIMKDTEQYIKTCRAC 1157

Query: 185  QKFADVPRAPATMQTPVVASWPFDIWGLDLIGPFKKGRGGVTHLIVAVDYFTKWIEAKPI 364
            QK     +AP     P+   WPF  WG+D++GP  + +G +  +IVA++YF++WIEA+ +
Sbjct: 1158 QKVGSSSKAPPKELQPIPPVWPFYRWGIDIVGPLPRAKGDLRFVIVAIEYFSRWIEAEAV 1217

Query: 365  ASLTQENVLNFIHDNIWCRFGIPRVFVSDHGSQFKS-YFTEECEKLGIKILKSSVAYPQG 541
            A +T   +  F+  NI CRFGIP+  V D+G QF+S  F + C+ L +KI  +SV +PQ 
Sbjct: 1218 ARITSAAMQKFVWKNIICRFGIPKEIVCDNGKQFESEKFKDLCQGLHLKINFASVGHPQT 1277

Query: 542  NGQAEAGNKKILDILRK 592
            NG  E  N K+++ ++K
Sbjct: 1278 NGAVERANGKVVEAIKK 1294