BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016078
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...   180   1e-43
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   178   5e-43
gb|AAO23092.1| putative polyprotein [Oryza sativa Japonica Group...   176   2e-42
gb|AAP94585.1| putative gag-pol precursor [Zea mays]                  175   4e-42
gb|ABB47013.1| retrotransposon protein, putative, Ty3-gypsy subc...   174   7e-42

>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score =  180 bits (456), Expect = 1e-43
 Identities = 79/178 (44%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
 Frame = -1

Query: 531  PLLRCIRPEETDKLLEEIHAGVCGGHQASRTLADRIIFTGYYWPSLRKDAEDYSKKCMAC 352
            PLL+C+  EE  K++ EIH G+CG HQA R++A ++I  G YWP++ KD E Y K C AC
Sbjct: 1601 PLLKCVTREEGMKMVVEIHEGLCGAHQAPRSVASKVIRQGIYWPTIMKDTEKYIKTCKAC 1660

Query: 351  QKFADVPRAPATMQTPVVASWPFDIWGLDLIGPFKKGRGGVTHLIVAVDYFTKWIEAKPI 172
            QKF  + +AP     P+   WPF  WG+D++GP  + +G +  +IVA++YF++WIEA+ +
Sbjct: 1661 QKFGPMTKAPPKELQPIPLVWPFYRWGIDIVGPLPRAKGDLRFVIVAIEYFSRWIEAEAV 1720

Query: 171  ASLTQETVLNFIHDNIWCRFGIPRVFVSDHGSQFKS-YFIEECENLGIQVLKSSVAYP 1
            A +T   V  F+  N+ CRFGIP+  V D+G QF+S  F + C+ L +Q+  +SV +P
Sbjct: 1721 ARITSAAVQKFVWKNVICRFGIPKEIVCDNGKQFESGKFQDMCKGLNLQINFASVGHP 1778


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  178 bits (451), Expect = 5e-43
 Identities = 79/178 (44%), Positives = 117/178 (65%), Gaps = 1/178 (0%)
 Frame = -1

Query: 531  PLLRCIRPEETDKLLEEIHAGVCGGHQASRTLADRIIFTGYYWPSLRKDAEDYSKKCMAC 352
            PLL+C+  EE  K++ EIH G+CG HQA R++A ++I  G YWP++ KD E Y K C AC
Sbjct: 1619 PLLKCVTREEGMKMVVEIHEGLCGAHQAPRSVASKVIRQGIYWPTIMKDTEKYIKTCKAC 1678

Query: 351  QKFADVPRAPATMQTPVVASWPFDIWGLDLIGPFKKGRGGVTHLIVAVDYFTKWIEAKPI 172
            QKF  + +AP     P+   WPF  WG+D++ P  + +G +  +IVA++YF++WIEA+ +
Sbjct: 1679 QKFGPMTKAPPKELQPIPPVWPFYRWGIDIVSPLPRAKGDLRFVIVAIEYFSRWIEAEAV 1738

Query: 171  ASLTQETVLNFIHDNIWCRFGIPRVFVSDHGSQFKS-YFIEECENLGIQVLKSSVAYP 1
            A +T   V  F+  NI CRFGIP+  V D+G QF+S  F + C+ L +Q+  +SV +P
Sbjct: 1739 ARITSAAVQKFVWKNIICRFGIPKEIVCDNGKQFESGKFQDMCKGLNLQINFASVGHP 1796


>gb|AAO23092.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709049|gb|ABF96844.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 658

 Score =  176 bits (447), Expect = 2e-42
 Identities = 80/179 (44%), Positives = 116/179 (64%), Gaps = 1/179 (0%)
 Frame = -1

Query: 534 KPLLRCIRPEETDKLLEEIHAGVCGGHQASRTLADRIIFTGYYWPSLRKDAEDYSKKCMA 355
           +PLLRCI   E +++  EIH G+CG HQA+RT+A ++   G YWP++ K   +  KKC +
Sbjct: 297 QPLLRCISFAEGEEMAREIHQGLCGAHQAARTVASKVFREGVYWPTVLKVCAEQIKKCES 356

Query: 354 CQKFADVPRAPATMQTPVVASWPFDIWGLDLIGPFKKGRGGVTHLIVAVDYFTKWIEAKP 175
           CQ+      AP     P+   WPF  WGLD+IGPF   R G   +IVA++YF++WIEA+P
Sbjct: 357 CQRHGRSQSAPHYNLQPIAPIWPFARWGLDIIGPFSVARNGYKFVIVAIEYFSRWIEAEP 416

Query: 174 IASLTQETVLNFIHDNIWCRFGIPRVFVSDHGSQFKS-YFIEECENLGIQVLKSSVAYP 1
           + ++T   V  F+  NI CRFG+P+ F++D+G QF S  F E CE L +++  +SVA+P
Sbjct: 417 LGAITSAAVQKFVWKNIICRFGVPKEFITDNGKQFDSDKFREMCEGLNLEIRFASVAHP 475


>gb|AAP94585.1| putative gag-pol precursor [Zea mays]
          Length = 1833

 Score =  175 bits (443), Expect = 4e-42
 Identities = 84/177 (47%), Positives = 114/177 (64%), Gaps = 1/177 (0%)
 Frame = -1

Query: 528  LLRCIRPEETDKLLEEIHAGVCGGHQASRTLADRIIFTGYYWPSLRKDAEDYSKKCMACQ 349
            L++CI P    +LLEE+HAG CG H ASRTL  ++  + +YWP+ + DA +  ++C ACQ
Sbjct: 1476 LMKCILPSTGKQLLEEVHAGQCGVHAASRTLVGKVFRSEFYWPTAKNDAAELVQRCEACQ 1535

Query: 348  KFADVPRAPATMQTPVVASWPFDIWGLDLIGPFKKGRGGVTHLIVAVDYFTKWIEAKPIA 169
              +     PA     +  +WPF  WGLD+IGPFKK +GG TH++VA+D FTKWIE +PIA
Sbjct: 1536 YLSKQQHMPAQQLQTIPVTWPFACWGLDMIGPFKKAQGGYTHVLVAIDKFTKWIEFQPIA 1595

Query: 168  SLTQETVLNFIHDNIWCRFGIPRVFVSDHGSQF-KSYFIEECENLGIQVLKSSVAYP 1
            SLT    + FI   I+ RFGIP   ++D GS F  S F + CE   IQ+  +SVA+P
Sbjct: 1596 SLTSAKAVEFIQSIIF-RFGIPNSIITDLGSNFTSSEFFDFCEQKSIQIKYASVAHP 1651


>gb|ABB47013.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1475

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/179 (44%), Positives = 116/179 (64%), Gaps = 1/179 (0%)
 Frame = -1

Query: 534  KPLLRCIRPEETDKLLEEIHAGVCGGHQASRTLADRIIFTGYYWPSLRKDAEDYSKKCMA 355
            +PLLRCI   E +++ +EIH G+CG HQA+RT+A ++   G YWP++ K   +  KKC +
Sbjct: 1114 QPLLRCISFAEGEEMAKEIHQGLCGAHQAARTVASKVFRQGVYWPTVLKVCAEQIKKCES 1173

Query: 354  CQKFADVPRAPATMQTPVVASWPFDIWGLDLIGPFKKGRGGVTHLIVAVDYFTKWIEAKP 175
            CQ+      AP     P+   WPF  WGLD+IGPF   R G   +IVAV+YF++WIEA+P
Sbjct: 1174 CQRHGRSQTAPHYDLQPITPIWPFARWGLDIIGPFPVARNGYKFVIVAVEYFSRWIEAEP 1233

Query: 174  IASLTQETVLNFIHDNIWCRFGIPRVFVSDHGSQFKS-YFIEECENLGIQVLKSSVAYP 1
            + ++T   V  F+  NI CRFG+P+  ++D+G QF S  F E CE L +++  +SVA+P
Sbjct: 1234 LGAITSAAVQKFVWKNIICRFGVPKEIITDNGKQFDSKKFREMCEGLNLEIRFTSVAHP 1292