BLASTX nr result

ID: Aconitum21_contig00016055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016055
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, ...    89   5e-16
sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, ...    89   5e-16
emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]           89   5e-16
emb|CBI34907.3| unnamed protein product [Vitis vinifera]               88   1e-15
ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloro...    88   1e-15

>sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|248303|gb|AAB21989.1|
           ribosomal protein L12 [Nicotiana sylvestris]
          Length = 186

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = +3

Query: 459 KTEFDVVIEEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE 599
           KTEFDVVI+EVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE
Sbjct: 116 KTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE 162



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
 Frame = +2

Query: 140 PKQTLQFPLQNPNFPHKRSPLLPPISAV-ASEKVETIGKQLSELTLLEARSLVDWLQDEL 316
           PK+TL+FP++ P   ++R+  L P++AV A EKV  +G ++S LTL +A+ LV++LQD+L
Sbjct: 28  PKKTLEFPIRTPKLQNRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDKL 87

Query: 317 GVTA 328
           GVTA
Sbjct: 88  GVTA 91


>sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|20018|emb|CAA44214.1|
           ribosomal protein L12-1 [Nicotiana tabacum]
          Length = 186

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = +3

Query: 459 KTEFDVVIEEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE 599
           KTEFDVVI+EVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE
Sbjct: 116 KTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE 162



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = +2

Query: 140 PKQTLQFPLQNPNFPHKRSPLLPPISAV-ASEKVETIGKQLSELTLLEARSLVDWLQDEL 316
           PK+ L+FP++ P   H+R+  L P++AV A EKV  +G ++S LTL +A+ LV++LQD+L
Sbjct: 28  PKKALEFPIRTPKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDKL 87

Query: 317 GVTA 328
           GVTA
Sbjct: 88  GVTA 91


>emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]
          Length = 191

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = +3

Query: 459 KTEFDVVIEEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE 599
           KTEFDVVI+EVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE
Sbjct: 116 KTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE 162



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = +2

Query: 140 PKQTLQFPLQNPNFPHKRSPLLPPISAV-ASEKVETIGKQLSELTLLEARSLVDWLQDEL 316
           PK+ L+FP++ P   H+R+  L P++AV A EKV  +G ++S LTL +A+ LV++LQD+L
Sbjct: 28  PKKALEFPIRTPKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDKL 87

Query: 317 GVTA 328
           GVTA
Sbjct: 88  GVTA 91


>emb|CBI34907.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +3

Query: 459 KTEFDVVIEEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE 599
           KTEFDV+IE+VPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE
Sbjct: 74  KTEFDVMIEDVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE 120


>ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloroplastic [Vitis
           vinifera]
          Length = 184

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +3

Query: 459 KTEFDVVIEEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE 599
           KTEFDV+IE+VPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE
Sbjct: 114 KTEFDVMIEDVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKE 160



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
 Frame = +2

Query: 143 KQTLQFPLQNPNFPHKRSPLLPPISAVAS-EKVETIGKQLSELTLLEARSLVDWLQDELG 319
           KQTL FP +NP   H R+  + PISAVA+ EK+E IG +LS LTL EAR LVDWLQD+LG
Sbjct: 28  KQTLDFPFRNPKIIH-RATFVRPISAVAAPEKIEKIGTELSNLTLEEARILVDWLQDKLG 86

Query: 320 VTA 328
           V+A
Sbjct: 87  VSA 89


Top