BLASTX nr result

ID: Aconitum21_contig00015552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015552
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33876.3| unnamed protein product [Vitis vinifera]              259   5e-67
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   259   5e-67
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri...   255   7e-66
ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|2...   248   9e-64
gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]      248   9e-64

>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  259 bits (662), Expect = 5e-67
 Identities = 130/193 (67%), Positives = 149/193 (77%), Gaps = 3/193 (1%)
 Frame = +1

Query: 1   NLPWGFSIEDVKKLFGECGTVKDVEIIKAKDGRHKGFSFITMGSAEEAQAVVQKFDSYEL 180
           NLPW  S+ D+K LFGECGTV DVEIIK KDGR +G++F+TM S EEAQAVV+KFDSYEL
Sbjct: 65  NLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYEL 124

Query: 181 SGRIVRVEFAKRLKKXXXXXX---AGTPVVETRHKLYVSNLAWKARASHLREFFSAEVNP 351
           SGRI+RVEFAKR KK         AG P  ETRHKLYVSNLAWK R++HLREFFS+  NP
Sbjct: 125 SGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNP 184

Query: 352 VSARVVFDRPSGGSAGYGFVSFSTHEEAEAAISSLDGKELMGRAIRLKFSEKKVDGSESE 531
           VS RVVFD PSG S GYGF SF+T EEAEAAIS+LDGKELMGR + LKFS K +D S  E
Sbjct: 185 VSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSVKTIDESGDE 244

Query: 532 LKDDTTPDGQSKE 570
            ++    +GQ +E
Sbjct: 245 KEEGDISEGQPEE 257


>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  259 bits (662), Expect = 5e-67
 Identities = 130/193 (67%), Positives = 149/193 (77%), Gaps = 3/193 (1%)
 Frame = +1

Query: 1   NLPWGFSIEDVKKLFGECGTVKDVEIIKAKDGRHKGFSFITMGSAEEAQAVVQKFDSYEL 180
           NLPW  S+ D+K LFGECGTV DVEIIK KDGR +G++F+TM S EEAQAVV+KFDSYEL
Sbjct: 95  NLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYEL 154

Query: 181 SGRIVRVEFAKRLKKXXXXXX---AGTPVVETRHKLYVSNLAWKARASHLREFFSAEVNP 351
           SGRI+RVEFAKR KK         AG P  ETRHKLYVSNLAWK R++HLREFFS+  NP
Sbjct: 155 SGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNP 214

Query: 352 VSARVVFDRPSGGSAGYGFVSFSTHEEAEAAISSLDGKELMGRAIRLKFSEKKVDGSESE 531
           VS RVVFD PSG S GYGF SF+T EEAEAAIS+LDGKELMGR + LKFS K +D S  E
Sbjct: 215 VSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSVKTIDESGDE 274

Query: 532 LKDDTTPDGQSKE 570
            ++    +GQ +E
Sbjct: 275 KEEGDISEGQPEE 287


>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532973|gb|EEF34739.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 278

 Score =  255 bits (652), Expect = 7e-66
 Identities = 122/190 (64%), Positives = 152/190 (80%)
 Frame = +1

Query: 1   NLPWGFSIEDVKKLFGECGTVKDVEIIKAKDGRHKGFSFITMGSAEEAQAVVQKFDSYEL 180
           NLPW  S+ D+K LFG+CGTV DVEIIK K+GR +GF+F+T+ S EEAQA + K DS+E+
Sbjct: 89  NLPWSLSVVDIKNLFGQCGTVTDVEIIKQKNGRSRGFAFVTLASGEEAQAAIDKLDSHEV 148

Query: 181 SGRIVRVEFAKRLKKXXXXXXAGTPVVETRHKLYVSNLAWKARASHLREFFSAEVNPVSA 360
           SGRI+RVEFAKRLK        GT   ETRHK+YVSNLAWK R++HLREFFS   +PVS+
Sbjct: 149 SGRIIRVEFAKRLKPPSPPSPTGTSARETRHKIYVSNLAWKVRSTHLREFFSTNFSPVSS 208

Query: 361 RVVFDRPSGGSAGYGFVSFSTHEEAEAAISSLDGKELMGRAIRLKFSEKKVDGSESELKD 540
           RVVFD P+G S+GYGFVSF+T EEAEAAIS+LDGKELMGR +RLKFS++K D SESE ++
Sbjct: 209 RVVFDSPTGRSSGYGFVSFATREEAEAAISALDGKELMGRPLRLKFSDRKTDESESENQE 268

Query: 541 DTTPDGQSKE 570
           +   + QS++
Sbjct: 269 EENVEDQSEQ 278



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/80 (35%), Positives = 47/80 (58%)
 Frame = +1

Query: 268 RHKLYVSNLAWKARASHLREFFSAEVNPVSARVVFDRPSGGSAGYGFVSFSTHEEAEAAI 447
           + KLYV NL W      ++  F  +   V+   +  + +G S G+ FV+ ++ EEA+AAI
Sbjct: 82  KRKLYVFNLPWSLSVVDIKNLF-GQCGTVTDVEIIKQKNGRSRGFAFVTLASGEEAQAAI 140

Query: 448 SSLDGKELMGRAIRLKFSEK 507
             LD  E+ GR IR++F+++
Sbjct: 141 DKLDSHEVSGRIIRVEFAKR 160


>ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|222833851|gb|EEE72328.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  248 bits (634), Expect = 9e-64
 Identities = 124/194 (63%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
 Frame = +1

Query: 1   NLPWGFSIEDVKKLFGECGTVKDVEIIKAKDGRHKGFSFITMGSAEEAQAVVQKFDSYEL 180
           NLPW FS+ D+K LFG+CGTV DVEIIK K+GR +GF+F+TM + EEAQA + KF+S E+
Sbjct: 100 NLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEV 159

Query: 181 SGRIVRVEFAKRLKKXXXXXXAGTPVV----ETRHKLYVSNLAWKARASHLREFFSAEVN 348
           SGRI+RVEFAKRL++       GTP      ETRHKLY+SNLAWK R SHLREFFS   N
Sbjct: 160 SGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCN 219

Query: 349 PVSARVVFDRPSGGSAGYGFVSFSTHEEAEAAISSLDGKELMGRAIRLKFSEKKVDGSES 528
           PVS+RVVFD P+G S+GYGFVSF+T EEA AAIS+  GKELMGR IRLKFSE K D S +
Sbjct: 220 PVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIRLKFSEDKADESGT 279

Query: 529 ELKDDTTPDGQSKE 570
           E K++ T + Q +E
Sbjct: 280 EKKEEETSEVQLEE 293


>gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 294

 Score =  248 bits (634), Expect = 9e-64
 Identities = 124/194 (63%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
 Frame = +1

Query: 1   NLPWGFSIEDVKKLFGECGTVKDVEIIKAKDGRHKGFSFITMGSAEEAQAVVQKFDSYEL 180
           NLPW FS+ D+K LFG+CGTV DVEIIK K+GR +GF+F+TM + EEAQA + KF+S E+
Sbjct: 100 NLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEV 159

Query: 181 SGRIVRVEFAKRLKKXXXXXXAGTPVV----ETRHKLYVSNLAWKARASHLREFFSAEVN 348
           SGRI+RVEFAKRL++       GTP      ETRHKLY+SNLAWK R SHLREFFS   N
Sbjct: 160 SGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCN 219

Query: 349 PVSARVVFDRPSGGSAGYGFVSFSTHEEAEAAISSLDGKELMGRAIRLKFSEKKVDGSES 528
           PVS+RVVFD P+G S+GYGFVSF+T EEA AAIS+  GKELMGR IRLKFSE K D S +
Sbjct: 220 PVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIRLKFSEDKADESGT 279

Query: 529 ELKDDTTPDGQSKE 570
           E K++ T + Q +E
Sbjct: 280 EKKEEETSEVQLEE 293


Top