BLASTX nr result

ID: Aconitum21_contig00015361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015361
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containin...    92   3e-17
emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]    92   3e-17
ref|XP_002514184.1| hypothetical protein RCOM_1048570 [Ricinus c...    86   4e-15
gb|ABK92961.1| unknown [Populus trichocarpa]                           75   4e-12
ref|XP_002309525.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12

>ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis
           vinifera]
          Length = 379

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 6/132 (4%)
 Frame = +3

Query: 3   SYDGSPLRHALDSYYTKGS----PTSTLFTXXXXXXXXXXXXXXXAQMLSRSVGANSVND 170
           SYDGSPLR A D Y +KGS    PTSTL +               +   + S   NS+++
Sbjct: 208 SYDGSPLRLAFDPYLSKGSFISSPTSTLISPPVSPPSDSPPMSPNSPSFTGSF--NSMSE 265

Query: 171 LVLASLRHLQLNK--LASTSRGVQLGSGFLSPRAVSSLRPAFASLPNTPTQTTSRSGFSK 344
           LV AS+R+LQ+ K  ++  S GVQ+GSGF SPR  S+LRP F SLP+TPT+T +RSG   
Sbjct: 266 LV-ASMRNLQVGKAKMSPQSWGVQMGSGFGSPRG-STLRPGFCSLPSTPTRTPARSGLGG 323

Query: 345 LNFWDTAECVEE 380
           L+ WD   C EE
Sbjct: 324 LDVWDKT-CEEE 334


>emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]
          Length = 426

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 6/132 (4%)
 Frame = +3

Query: 3   SYDGSPLRHALDSYYTKGS----PTSTLFTXXXXXXXXXXXXXXXAQMLSRSVGANSVND 170
           SYDGSPLR A D Y +KGS    PTSTL +               +   + S   NS+++
Sbjct: 255 SYDGSPLRLAFDPYLSKGSFISSPTSTLISPPVSPPSDSPPMSPNSPSFTGSF--NSMSE 312

Query: 171 LVLASLRHLQLNK--LASTSRGVQLGSGFLSPRAVSSLRPAFASLPNTPTQTTSRSGFSK 344
           LV AS+R+LQ+ K  ++  S GVQ+GSGF SPR  S+LRP F SLP+TPT+T +RSG   
Sbjct: 313 LV-ASMRNLQVGKAKMSPQSWGVQMGSGFGSPRG-STLRPGFCSLPSTPTRTPARSGLGG 370

Query: 345 LNFWDTAECVEE 380
           L+ WD   C EE
Sbjct: 371 LDVWDKT-CEEE 381


>ref|XP_002514184.1| hypothetical protein RCOM_1048570 [Ricinus communis]
           gi|223546640|gb|EEF48138.1| hypothetical protein
           RCOM_1048570 [Ricinus communis]
          Length = 259

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 60/131 (45%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
 Frame = +3

Query: 3   SYDGSPLRHALDSYY-TKGSP-TSTLFTXXXXXXXXXXXXXXXAQMLSRSVGANSVNDLV 176
           SYDGSPLR A+++    K  P  S+  +               + MLSRSVG+NS+N++V
Sbjct: 82  SYDGSPLRQAMEAAACVKVLPFLSSPSSISPPPTPPAADSPPMSPMLSRSVGSNSINEMV 141

Query: 177 LASLRHLQLNKLAS--TSRGVQLG-SGFLSPRAVSSLRPAFASLPNTPTQTTSRSGFSKL 347
            ASLR+LQL K+ S  +S  VQ+G SGF SPR+ S LRP F SLP TPT   +RSG    
Sbjct: 142 -ASLRNLQLGKMRSLPSSWNVQVGGSGFGSPRSGSVLRPGFCSLPTTPTSAPTRSGLGYR 200

Query: 348 NFWDTAECVEE 380
           + WD  + +EE
Sbjct: 201 DMWD--DVIEE 209


>gb|ABK92961.1| unknown [Populus trichocarpa]
          Length = 384

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 57/136 (41%), Positives = 73/136 (53%), Gaps = 13/136 (9%)
 Frame = +3

Query: 12  GSPLRHALDSYYTKG-----SPTSTLFTXXXXXXXXXXXXXXXAQMLSRSVGANSVNDL- 173
           GS + H LDSY TK      SPTS L +               +  +    G+ S N + 
Sbjct: 202 GSLVMHPLDSYLTKAGSFVSSPTSILTSPPVSPPSDSPPMSPVSPQVIGGSGSGSFNSMS 261

Query: 174 -VLASLRHLQLNKLASTSR----GVQLGSGFLSPRAVSSLRPAFASLPNTPTQT-TSRSG 335
            +LAS+R LQL K+   S     GVQ GS F SPR  SSLRP F SLP+TPT+T  +RSG
Sbjct: 262 ELLASMRGLQLGKMKIGSPVGSWGVQSGSRFGSPRG-SSLRPGFCSLPSTPTRTMVTRSG 320

Query: 336 FSKLNFW-DTAECVEE 380
             +L+ W D++ C EE
Sbjct: 321 LGQLDIWGDSSTCEEE 336


>ref|XP_002309525.1| predicted protein [Populus trichocarpa] gi|222855501|gb|EEE93048.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 58/139 (41%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
 Frame = +3

Query: 6   YD-GSPLRHALDSYYTKG-----SPTSTLFTXXXXXXXXXXXXXXXAQMLSRSVGANSVN 167
           YD GSP+ H  DSY TK      SPTS L +               +  +    G  S+N
Sbjct: 205 YDFGSPVIHPFDSYMTKAGIFVSSPTSILTSPPVSPPSDSPPMSPGSPQVIGGSGPGSLN 264

Query: 168 DL--VLASLRHLQLNKLASTSR----GVQLGSGFLSPRAVSSLRPAFASLPNTPTQT-TS 326
            +  +LAS+R LQ+ K    S     GVQ G  F SPR  SSLRP F SLP+TPT+T  S
Sbjct: 265 SMSALLASMRGLQVGKAKMGSPVGSWGVQSGFRFGSPRG-SSLRPGFCSLPSTPTRTMAS 323

Query: 327 RSGFSKLNFWDTAECVEEE 383
           RSG S+L+ W      EEE
Sbjct: 324 RSGLSQLDIWGDGVTCEEE 342


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