BLASTX nr result

ID: Aconitum21_contig00015298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015298
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]              272   2e-71
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     272   2e-71
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2...   265   3e-69
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                         265   3e-69
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]        265   4e-69

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  272 bits (696), Expect = 2e-71
 Identities = 129/146 (88%), Positives = 140/146 (95%)
 Frame = +1

Query: 4   AVLSELITKTNAQEMKWIVLIILKDLKLGVSEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 183
           +VLS LI KTNAQEMKWIV+IILKDLKLG+SEKSIFHEFHPDAEDLFNVTCDLKLVCEKL
Sbjct: 147 SVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 206

Query: 184 KDRSQRHKRQDIEIGKAVRPQLALRVSDAAAAWKKLHGKEVVVECKFDGDRIQIHKNGTE 363
           KDRSQRHKRQDIE+GKAVRPQLA+RV+DA AAWKKLHGKEVVVECKFDGDRIQIHKNG E
Sbjct: 207 KDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKKLHGKEVVVECKFDGDRIQIHKNGEE 266

Query: 364 IHFFSRNFLDHHEYRHAMSNIIKENI 441
           IHFFSRNFLDH EY++AMSNI+ +N+
Sbjct: 267 IHFFSRNFLDHPEYKYAMSNIVAQNL 292


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  272 bits (696), Expect = 2e-71
 Identities = 129/146 (88%), Positives = 140/146 (95%)
 Frame = +1

Query: 4   AVLSELITKTNAQEMKWIVLIILKDLKLGVSEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 183
           +VLS LI KTNAQEMKWIV+IILKDLKLG+SEKSIFHEFHPDAEDLFNVTCDLKLVCEKL
Sbjct: 147 SVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 206

Query: 184 KDRSQRHKRQDIEIGKAVRPQLALRVSDAAAAWKKLHGKEVVVECKFDGDRIQIHKNGTE 363
           KDRSQRHKRQDIE+GKAVRPQLA+RV+DA AAWKKLHGKEVVVECKFDGDRIQIHKNG E
Sbjct: 207 KDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKKLHGKEVVVECKFDGDRIQIHKNGEE 266

Query: 364 IHFFSRNFLDHHEYRHAMSNIIKENI 441
           IHFFSRNFLDH EY++AMSNI+ +N+
Sbjct: 267 IHFFSRNFLDHPEYKYAMSNIVAQNL 292


>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
           predicted protein [Populus trichocarpa]
          Length = 1242

 Score =  265 bits (677), Expect = 3e-69
 Identities = 123/146 (84%), Positives = 137/146 (93%)
 Frame = +1

Query: 4   AVLSELITKTNAQEMKWIVLIILKDLKLGVSEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 183
           AVL+ LI KTN QEMKWI++IILKDLKLG+SEKS+FHEFHPDAEDLFNVTCDLKLVCEKL
Sbjct: 156 AVLAALINKTNTQEMKWIIMIILKDLKLGMSEKSVFHEFHPDAEDLFNVTCDLKLVCEKL 215

Query: 184 KDRSQRHKRQDIEIGKAVRPQLALRVSDAAAAWKKLHGKEVVVECKFDGDRIQIHKNGTE 363
           +DR+QRHKRQDIE+GKAVRPQLA+RVSDA AAWKKLHGKEVVVECKFDGDRIQIHKNG E
Sbjct: 216 RDRNQRHKRQDIEVGKAVRPQLAMRVSDAHAAWKKLHGKEVVVECKFDGDRIQIHKNGAE 275

Query: 364 IHFFSRNFLDHHEYRHAMSNIIKENI 441
           +H+FSRNFLDH EY H MS+II +N+
Sbjct: 276 VHYFSRNFLDHSEYAHGMSDIIVQNV 301


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score =  265 bits (677), Expect = 3e-69
 Identities = 123/146 (84%), Positives = 137/146 (93%)
 Frame = +1

Query: 4   AVLSELITKTNAQEMKWIVLIILKDLKLGVSEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 183
           AVL+ LI KTN QEMKWI++IILKDLKLG+SEKS+FHEFHPDAEDLFNVTCDLKLVCEKL
Sbjct: 156 AVLAALINKTNTQEMKWIIMIILKDLKLGMSEKSVFHEFHPDAEDLFNVTCDLKLVCEKL 215

Query: 184 KDRSQRHKRQDIEIGKAVRPQLALRVSDAAAAWKKLHGKEVVVECKFDGDRIQIHKNGTE 363
           +DR+QRHKRQDIE+GKAVRPQLA+RVSDA AAWKKLHGKEVVVECKFDGDRIQIHKNG E
Sbjct: 216 RDRNQRHKRQDIEVGKAVRPQLAMRVSDAHAAWKKLHGKEVVVECKFDGDRIQIHKNGAE 275

Query: 364 IHFFSRNFLDHHEYRHAMSNIIKENI 441
           +H+FSRNFLDH EY H MS+II +N+
Sbjct: 276 VHYFSRNFLDHSEYAHGMSDIIVQNV 301


>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
          Length = 1171

 Score =  265 bits (676), Expect = 4e-69
 Identities = 125/147 (85%), Positives = 137/147 (93%)
 Frame = +1

Query: 1   IAVLSELITKTNAQEMKWIVLIILKDLKLGVSEKSIFHEFHPDAEDLFNVTCDLKLVCEK 180
           I VLS LI KTNAQEMKWI++IILKDLKLG+SEKSIFHEFHPDAEDLFNVTCDLKLVCEK
Sbjct: 146 ILVLSTLIQKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEK 205

Query: 181 LKDRSQRHKRQDIEIGKAVRPQLALRVSDAAAAWKKLHGKEVVVECKFDGDRIQIHKNGT 360
           L+DR+QRHKRQDIE+GKAVRPQLA RV++A  AWKKLHGK+VVVECKFDGDRIQIHKNGT
Sbjct: 206 LRDRNQRHKRQDIEVGKAVRPQLAKRVANATEAWKKLHGKDVVVECKFDGDRIQIHKNGT 265

Query: 361 EIHFFSRNFLDHHEYRHAMSNIIKENI 441
           EIHFFSRNF+DH EY HAMS II +N+
Sbjct: 266 EIHFFSRNFIDHSEYAHAMSEIIIQNV 292


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