BLASTX nr result

ID: Aconitum21_contig00015212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015212
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328755.1| predicted protein [Populus trichocarpa] gi|2...   132   1e-28
ref|XP_002519936.1| AP-1 complex subunit gamma-2, putative [Rici...   130   4e-28
ref|XP_002269504.2| PREDICTED: AP-4 complex subunit epsilon-like...   122   2e-25
ref|XP_002458982.1| hypothetical protein SORBIDRAFT_03g043730 [S...   120   7e-25
ref|XP_003629017.1| AP-4 complex subunit epsilon-1 [Medicago tru...   115   2e-23

>ref|XP_002328755.1| predicted protein [Populus trichocarpa] gi|222839053|gb|EEE77404.1|
            predicted protein [Populus trichocarpa]
          Length = 980

 Score =  132 bits (333), Expect = 1e-28
 Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 9/213 (4%)
 Frame = +2

Query: 2    RKSQIEVDPEKQKLAASIFXXXXXXXXXXXXXXXQKTARGKSPVVKK----SDVATTSIQ 169
            R+ Q+E+  EKQKLAAS+F                K A+  S   +K       A +S  
Sbjct: 777  RRPQVEISEEKQKLAASLFGGSSKTERRSSTG--HKVAKASSHAAEKLHTPKSTAISSAD 834

Query: 170  HPTEKASPN-TSPPPDLVDWEEPI-PSNTPLVDPFEQLEGLVAPNEVSSNIDSGTVGVSR 343
            +  EK  PN   PPPDL+D  EPI  S+ P VDPF QLEGL+   +V      GT+G ++
Sbjct: 835  NAVEK--PNLVQPPPDLLDLGEPIVTSSAPSVDPFRQLEGLLDATQVP-----GTLGGTK 887

Query: 344  PSDLLTLY-DLPTSGLTSNAPNLPQNSANEINLISSAANPANMNINGGST--HPSTLKKG 514
              D + LY + P SG ++   +      +EINL+   +N ++  ++GG+T  +PS + KG
Sbjct: 888  APDFMALYAETPASGQSAGVSHPLSLIRDEINLVPGLSNASSNTVHGGATAANPSQISKG 947

Query: 515  PSSQVALEKHAVARQVGVTPSGTNPNLFRDLLG 613
            P+ + ALEK A+ RQ+GVTPSG NPNLF+DL G
Sbjct: 948  PNVKDALEKDALVRQMGVTPSGQNPNLFKDLFG 980


>ref|XP_002519936.1| AP-1 complex subunit gamma-2, putative [Ricinus communis]
            gi|223540982|gb|EEF42540.1| AP-1 complex subunit gamma-2,
            putative [Ricinus communis]
          Length = 981

 Score =  130 bits (328), Expect = 4e-28
 Identities = 83/208 (39%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
 Frame = +2

Query: 2    RKSQIEVDPEKQKLAASIFXXXXXXXXXXXXXXXQKTARGKSPVVKKSDVATTSIQHPTE 181
            R+ Q+E+ PEKQKLAAS+F                K ARG S V K + V+ T +    E
Sbjct: 777  RRPQVEISPEKQKLAASLFGGSSKTERRTSSIG-HKVARGSSHVPKPAAVSATDVA--VE 833

Query: 182  KASPNTSPPPDLVDW-EEPIPSNTPLVDPFEQLEGLVAPNEVSSNIDSGTVGVSRPSDLL 358
            + +    PPPDL+D  E  + S+  LVDPF+QLEGL+   ++SS+ +SG    S   D++
Sbjct: 834  RKTTPVQPPPDLLDLGESTVKSSDLLVDPFKQLEGLLDQTQLSSSANSGMNSASSAPDIM 893

Query: 359  TLY-DLPTSGLTSNAPNLPQNSANEINLISSAANPANMNINGGSTHPSTLK--KGPSSQV 529
             LY D   SG + N  +   +  ++ NL+S + N        GST  S+ +  KGP+ + 
Sbjct: 894  QLYADTSASGQSGNLVSPLSSHKSDDNLVSGSTNAIANPAQSGSTVLSSTQFSKGPNLKD 953

Query: 530  ALEKHAVARQVGVTPSGTNPNLFRDLLG 613
            +LEK A+ RQ+GVTP   NPNLF+DLLG
Sbjct: 954  SLEKDALVRQMGVTPQSQNPNLFKDLLG 981


>ref|XP_002269504.2| PREDICTED: AP-4 complex subunit epsilon-like [Vitis vinifera]
          Length = 1489

 Score =  122 bits (305), Expect = 2e-25
 Identities = 81/210 (38%), Positives = 119/210 (56%), Gaps = 6/210 (2%)
 Frame = +2

Query: 2    RKSQIEVDPEKQKLAASIFXXXXXXXXXXXXXXXQKTARGKSPVVKKSD----VATTSIQ 169
            R +Q E+  EK+KLAAS+F                K AR  SP V+KS     VA+++  
Sbjct: 1292 RSAQAEISSEKKKLAASLFGGPSKTEKRPSSTS-HKVARSTSPAVEKSQGPKAVASSTTG 1350

Query: 170  HPTEKASPNTSPPPDLVDWEEP-IPSNTPLVDPFEQLEGLVAPNEVSSNIDSGTVGVSRP 346
              +EKA+P    PPDL+D  EP + S+   VDPF+QLEGL+ P + +S  + G V  ++ 
Sbjct: 1351 VVSEKAAP-LQQPPDLLDLGEPTVTSSASSVDPFKQLEGLLDPTQATSAANHGAVDNTKA 1409

Query: 347  SDLLTLY-DLPTSGLTSNAPNLPQNSANEINLISSAANPANMNINGGSTHPSTLKKGPSS 523
            +D++++Y + P SG +S   N    +A + NLI   +          +T+ +   KGP+ 
Sbjct: 1410 ADIMSMYSEFPPSGQSSVIANPFTTNAGDANLIPGLS----------TTNKTGHAKGPNP 1459

Query: 524  QVALEKHAVARQVGVTPSGTNPNLFRDLLG 613
            + ALEK A+ RQ+GVTP   NPNLF+DLLG
Sbjct: 1460 RDALEKDALVRQMGVTPMSQNPNLFKDLLG 1489


>ref|XP_002458982.1| hypothetical protein SORBIDRAFT_03g043730 [Sorghum bicolor]
            gi|241930957|gb|EES04102.1| hypothetical protein
            SORBIDRAFT_03g043730 [Sorghum bicolor]
          Length = 969

 Score =  120 bits (300), Expect = 7e-25
 Identities = 86/214 (40%), Positives = 118/214 (55%), Gaps = 10/214 (4%)
 Frame = +2

Query: 2    RKSQIEVDPEKQKLAASIFXXXXXXXXXXXXXXXQKTARGKSPVVKKSDVATTSIQ-HPT 178
            R+   EV  EKQ+LAAS+F               +KTA+  SP  +K  VATT++   P 
Sbjct: 779  RQQGTEVSAEKQRLAASLFGSAAAKADRKAQAS-RKTAKD-SPSTEK--VATTNVTAQPV 834

Query: 179  EKASPNTSPPPDLVDW-EEPIPSNTPLVDPFEQLEGLVAPNEVSSNIDSGT--VGVSRPS 349
            ++     +PPPDL+D  +EP+ SN PL DPF QLEGL+ P   +  + SGT   G S+  
Sbjct: 835  KEQVIPAAPPPDLLDLGDEPVSSNPPLADPFSQLEGLLGPASAAPVL-SGTPATGASKAP 893

Query: 350  DLLTLY--DLPTSGLTSNAPNLPQNSANEINLISSAANPANMNINGGSTHPSTL----KK 511
            DL++++  D+PT                   + S + +P   ++N  S+H        KK
Sbjct: 894  DLMSIFSDDVPTG------------------VASGSTDPTLGDVNSTSSHKGATAVASKK 935

Query: 512  GPSSQVALEKHAVARQVGVTPSGTNPNLFRDLLG 613
            GPS Q AL+K A ARQVGVTP+G NPNLF+DLLG
Sbjct: 936  GPSLQDALQKDATARQVGVTPTGNNPNLFKDLLG 969


>ref|XP_003629017.1| AP-4 complex subunit epsilon-1 [Medicago truncatula]
            gi|355523039|gb|AET03493.1| AP-4 complex subunit
            epsilon-1 [Medicago truncatula]
          Length = 1018

 Score =  115 bits (287), Expect = 2e-23
 Identities = 80/211 (37%), Positives = 112/211 (53%), Gaps = 7/211 (3%)
 Frame = +2

Query: 2    RKSQIEVDPEKQKLAASIFXXXXXXXXXXXXXXXQKTARGKSPVVKKSDVATTSIQHPTE 181
            RK Q E+DPEKQKLAAS+F                K  +  +    +S  +  +I  P +
Sbjct: 816  RKQQNEIDPEKQKLAASLFGGSTKPERRTSTS--SKVPKANAGAADRSQDSKAAIV-PNK 872

Query: 182  KASPNTS---PPPDLVDWEEP-IPSNTPLVDPFEQLEGLVAPNEVSSNIDSGTVGVSRPS 349
             +  N++   PP DL+D  EP +    P VDPF QLEGL+ P+ +SS +      V+   
Sbjct: 873  ASGDNSNQQPPPQDLLDLGEPNVTVAPPTVDPFMQLEGLLDPS-ISSTVSHSDSAVTNAP 931

Query: 350  DLLTLYDLPTSGLTSNAPNLPQNSANEINLISSAANPANMNINGGSTHPSTLK---KGPS 520
            D++ LY   TSG  S    +P       +L+S  +N A +    G T PS +    KG +
Sbjct: 932  DIMGLYSGATSGEQSGGGYIPAGG----DLLSGLSNAAAVRGTTGETIPSPVSQSVKGAN 987

Query: 521  SQVALEKHAVARQVGVTPSGTNPNLFRDLLG 613
            ++ +LEK A  RQ+GVTP+G NPNLFRDLLG
Sbjct: 988  AKDSLEKDAKVRQMGVTPTGQNPNLFRDLLG 1018


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