BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015186
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...   374   e-101
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   374   e-101
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   371   e-100
ref|XP_002308586.1| predicted protein [Populus trichocarpa] gi|2...   369   e-100
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp....   369   e-99 

>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|296081598|emb|CBI20603.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  374 bits (960), Expect = e-101
 Identities = 184/293 (62%), Positives = 228/293 (77%)
 Frame = -1

Query: 1041 NEAEMSMGVKDVADLERMKTMLEVESGQVATFSRWAEAVGVDEKVLQQRLHYGWFCRDML 862
            NEAEMS GVK VA+LER++  LE E G VA+ S WAEA GVD+KVLQQ+L +GW+CRD L
Sbjct: 268  NEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDEL 327

Query: 861  LRSTHSLIVYLARNYRGLGISSEDLYQAGNVGVLKGAERFDHERGYQFSTYVQYWIRKEM 682
            LRSTHSL++Y+ARNYRG+G++ ED+ QAGN+GVL+GAERFDH +GY+FSTYVQYWIRK M
Sbjct: 328  LRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSM 387

Query: 681  SSFIEQHSREIHIPVTLSRRINQIKKARKTLYSLNGRYPDDEEIARFSSLSLTKIRFARK 502
            S+ + +H+R + IP TL+R I QI+KARK LY  +GRYPDD EIA+F+ LSL KIR A  
Sbjct: 388  STLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGN 447

Query: 501  CPRIVGSVDQKIGDDLSAKFTEFTPDTSIKSPEEIVMRKHMQKDVYELLQGLLPRESEVL 322
            C R+VGS DQ   D   A   EFTPDTSIKSPEE  M++  +KD++ LL+GL PRE ++L
Sbjct: 448  CLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQIL 507

Query: 321  FLRYGFWDGQCKSLEEIARIFRCSKEWIRKIEKSALTKLRKEETERNLNQYLN 163
             LRYGF + Q KSLEEI R F  SKEWIRK+EK+AL  LR EE  +NL  Y++
Sbjct: 508  VLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRDEEICQNLRHYVD 560


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  374 bits (960), Expect = e-101
 Identities = 184/293 (62%), Positives = 228/293 (77%)
 Frame = -1

Query: 1041 NEAEMSMGVKDVADLERMKTMLEVESGQVATFSRWAEAVGVDEKVLQQRLHYGWFCRDML 862
            NEAEMS GVK VA+LER++  LE E G VA+ S WAEA GVD+KVLQQ+L +GW+CRD L
Sbjct: 318  NEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDEL 377

Query: 861  LRSTHSLIVYLARNYRGLGISSEDLYQAGNVGVLKGAERFDHERGYQFSTYVQYWIRKEM 682
            LRSTHSL++Y+ARNYRG+G++ ED+ QAGN+GVL+GAERFDH +GY+FSTYVQYWIRK M
Sbjct: 378  LRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSM 437

Query: 681  SSFIEQHSREIHIPVTLSRRINQIKKARKTLYSLNGRYPDDEEIARFSSLSLTKIRFARK 502
            S+ + +H+R + IP TL+R I QI+KARK LY  +GRYPDD EIA+F+ LSL KIR A  
Sbjct: 438  STLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGN 497

Query: 501  CPRIVGSVDQKIGDDLSAKFTEFTPDTSIKSPEEIVMRKHMQKDVYELLQGLLPRESEVL 322
            C R+VGS DQ   D   A   EFTPDTSIKSPEE  M++  +KD++ LL+GL PRE ++L
Sbjct: 498  CLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQIL 557

Query: 321  FLRYGFWDGQCKSLEEIARIFRCSKEWIRKIEKSALTKLRKEETERNLNQYLN 163
             LRYGF + Q KSLEEI R F  SKEWIRK+EK+AL  LR EE  +NL  Y++
Sbjct: 558  VLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRDEEICQNLRHYVD 610


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 560

 Score =  371 bits (952), Expect = e-100
 Identities = 179/293 (61%), Positives = 232/293 (79%)
 Frame = -1

Query: 1041 NEAEMSMGVKDVADLERMKTMLEVESGQVATFSRWAEAVGVDEKVLQQRLHYGWFCRDML 862
            NEAEM+ G+K +ADLE+++T LE E+ +V + S WAEA G+D KVLQQ+L +GW+CRD L
Sbjct: 267  NEAEMARGIKVLADLEKIRTTLEEETERVVSLSCWAEAAGLDVKVLQQQLSFGWYCRDEL 326

Query: 861  LRSTHSLIVYLARNYRGLGISSEDLYQAGNVGVLKGAERFDHERGYQFSTYVQYWIRKEM 682
            ++ST SL++Y ARNYRG GI+ EDL QAGN+GVL+GAERFDH RGY+FSTYVQYWIRK M
Sbjct: 327  IKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSM 386

Query: 681  SSFIEQHSREIHIPVTLSRRINQIKKARKTLYSLNGRYPDDEEIARFSSLSLTKIRFARK 502
            S  + + +R I IP TLSR I QI+KARK L + NG+YPDD+EIA+++ LSL KI  A +
Sbjct: 387  SKIVSRLARGIQIPCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASR 446

Query: 501  CPRIVGSVDQKIGDDLSAKFTEFTPDTSIKSPEEIVMRKHMQKDVYELLQGLLPRESEVL 322
            C R+VGS+DQKIG+ L+AK+ EF PDTS++SPEE+VMR+HM +D++ LL+ L  RE +VL
Sbjct: 447  CLRVVGSIDQKIGESLNAKYLEFLPDTSVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVL 506

Query: 321  FLRYGFWDGQCKSLEEIARIFRCSKEWIRKIEKSALTKLRKEETERNLNQYLN 163
             LR+G  D Q KSLEEI R F  SKEW+R++EK  +T+LR EET RNL  Y+N
Sbjct: 507  ILRFGLNDYQPKSLEEIGRHFHVSKEWVRRLEKRVMTRLRNEETCRNLRHYIN 559


>ref|XP_002308586.1| predicted protein [Populus trichocarpa] gi|222854562|gb|EEE92109.1|
            predicted protein [Populus trichocarpa]
          Length = 559

 Score =  369 bits (947), Expect = e-100
 Identities = 177/292 (60%), Positives = 234/292 (80%)
 Frame = -1

Query: 1041 NEAEMSMGVKDVADLERMKTMLEVESGQVATFSRWAEAVGVDEKVLQQRLHYGWFCRDML 862
            NEA+M+ GVK  +DLER++T LE E+GQV + S WAEA G+D+KVLQQ+L +GW+CRD L
Sbjct: 266  NEAKMTRGVKVASDLERIRTTLEEETGQVVSLSCWAEATGLDKKVLQQQLQFGWYCRDEL 325

Query: 861  LRSTHSLIVYLARNYRGLGISSEDLYQAGNVGVLKGAERFDHERGYQFSTYVQYWIRKEM 682
            +++THSL++Y+ARNYRG+GI+ EDL QAGN+G+L+GAERFD  RGY+FSTYVQYWIRK M
Sbjct: 326  IKNTHSLVLYIARNYRGMGIAMEDLIQAGNLGLLQGAERFDPTRGYRFSTYVQYWIRKSM 385

Query: 681  SSFIEQHSREIHIPVTLSRRINQIKKARKTLYSLNGRYPDDEEIARFSSLSLTKIRFARK 502
               +E+H+R I IP  LSR IN+I+KARK L + +GRYPDD E+A+F+ LSL KI  A+K
Sbjct: 386  LKIVERHARGIQIPYALSRSINKIQKARKALSNSHGRYPDDWEVAKFTGLSLAKIESAQK 445

Query: 501  CPRIVGSVDQKIGDDLSAKFTEFTPDTSIKSPEEIVMRKHMQKDVYELLQGLLPRESEVL 322
            C R+V S+DQKIG+   AK++EF PD SI++PEE VMR+HM++++Y+LL+GL  RE +V+
Sbjct: 446  CLRVVASLDQKIGEGHYAKYSEFIPDMSIQNPEEAVMRQHMREEIYDLLRGLDSREKQVM 505

Query: 321  FLRYGFWDGQCKSLEEIARIFRCSKEWIRKIEKSALTKLRKEETERNLNQYL 166
             LRYGF D Q KSL EI R+FR SKE +RKIEK  + KLR E   RNL++Y+
Sbjct: 506  VLRYGFKDNQPKSLAEIGRLFRVSKERVRKIEKKIMIKLRDEGIRRNLSRYM 557


>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323785|gb|EFH54206.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 568

 Score =  369 bits (946), Expect = e-99
 Identities = 177/294 (60%), Positives = 236/294 (80%), Gaps = 1/294 (0%)
 Frame = -1

Query: 1041 NEAEMSMGVKDVADLERMKTMLEVESGQVATFSRWAEAVGVDEKVLQQRLHYGWFCRDML 862
            NEAEMS GVK VAD+ER++T LE ESG+VA+ S WAEA G++EK+L + LHYGW+CRD L
Sbjct: 274  NEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYGWYCRDEL 333

Query: 861  LRSTHSLIVYLARNYRGLGISSEDLYQAGNVGVLKGAERFDHERGYQFSTYVQYWIRKEM 682
            L+ST SL+++LARNYRGLGI+ EDL QAG VGVL+GAERFDH RGY+FSTYVQYWIRK M
Sbjct: 334  LKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSM 393

Query: 681  SSFIEQHSREIHIPVTLSRRINQIKKARKTLYSLNG-RYPDDEEIARFSSLSLTKIRFAR 505
            S  + +H+R +HIP ++ R INQI+KARKTL + +G +YP DE+I++ +SLS+ KIR A 
Sbjct: 394  SMMVSRHARGVHIPSSIIRTINQIQKARKTLKTSHGIKYPADEDISKLTSLSVKKIRAAN 453

Query: 504  KCPRIVGSVDQKIGDDLSAKFTEFTPDTSIKSPEEIVMRKHMQKDVYELLQGLLPRESEV 325
            +C ++VGS+++K+GD  S KF EFTPDT+++SPEE VMR+  ++D+++LL+GL PRE +V
Sbjct: 454  QCLKVVGSIEKKVGDCFSTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQV 513

Query: 324  LFLRYGFWDGQCKSLEEIARIFRCSKEWIRKIEKSALTKLRKEETERNLNQYLN 163
            + LRYG  + + KSLEEI ++ R SKEWIRKIE+ A+ KLR +    +L  YLN
Sbjct: 514  MVLRYGLQNYRPKSLEEIGKLLRVSKEWIRKIERRAMAKLRDQPNAEDLRYYLN 567