BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00015149
         (1381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   531   e-148
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   521   e-145
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   509   e-142
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   509   e-142
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-...   505   e-140

>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  531 bits (1368), Expect = e-148
 Identities = 279/379 (73%), Positives = 308/379 (81%), Gaps = 8/379 (2%)
 Frame = -3

Query: 1370 EKANKEKSYDVVRSNKKKVKRLGLSKRIAMXXXXXXXXXXXXXXXXXXR--------LVR 1215
            +KA KE S +VVR + KK KRL L KRIA+                  +        LVR
Sbjct: 140  DKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVASIQKKRDSKNEDENIDVLVR 199

Query: 1214 EYSSSTDVVSMDWKKMKIPPVLPSSEHTWLFKLMQPMKALLQVKDDMRKSLGREVTDGEL 1035
            EYS+STD+VS+DWKKMKIPPVLP SEH WLFKLMQPMK LL+VKD+++K LGRE TDGEL
Sbjct: 200  EYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPTDGEL 259

Query: 1034 AAATNMNVPQLRKQMEVGRAARNKLIKHNLRLVLFVINKYFQEFATGPRFQDLCQEGAKG 855
            A A +M+  Q+R+ MEVG+AARNKLIKHNLRLVLFVINKYFQEFA GP+FQDLCQ G KG
Sbjct: 260  AEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGVKG 319

Query: 854  LITAIDRFEPKRRFRLSTYGLFWIRHAIMRSMTTSSFTRVSFGLESVRVEIQRAKLNLMF 675
            LITAIDRFEPKR FRLSTYGLFWIRHAIMRSMT SSFTRVSFGLESVRVEIQRAKL L+F
Sbjct: 320  LITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLELLF 379

Query: 674  DLGREPTEDEIIEKVGITRERYREVMRASKPVISLHARHAVTQEEFISGITDVDGVGGDK 495
             L R PTE+EIIEKVGI+ ERY EVMRASK V+SLHARHA TQEE+I+GITDV+GVGGD+
Sbjct: 380  KLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHATTQEEYINGITDVEGVGGDR 439

Query: 494  KRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVK 315
             RQ A            LKPKESLV+RQRYGLDGKGDRTLGEIAGNL+ISREMVRKHEVK
Sbjct: 440  GRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEVK 499

Query: 314  ALMKLKHPARVDYLRRYIF 258
            ALMKLKHPARVDYLR+YIF
Sbjct: 500  ALMKLKHPARVDYLRQYIF 518


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  521 bits (1341), Expect = e-145
 Identities = 268/381 (70%), Positives = 307/381 (80%), Gaps = 8/381 (2%)
 Frame = -3

Query: 1379 KGKEKANKEKSYDVVRSNKKKVKRLGLSKRIAMXXXXXXXXXXXXXXXXXXR-------- 1224
            +G EKA    S  +VR+  KK KRL L KRIA+                  +        
Sbjct: 122  EGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKKKDSKDDNEKIEE 181

Query: 1223 LVREYSSSTDVVSMDWKKMKIPPVLPSSEHTWLFKLMQPMKALLQVKDDMRKSLGREVTD 1044
            LVR YS+ST++VS+DW+KMKIPPVLPS+EH WLFKLMQPMK LL VK D++K+LGR+ TD
Sbjct: 182  LVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVKADLQKNLGRDPTD 241

Query: 1043 GELAAATNMNVPQLRKQMEVGRAARNKLIKHNLRLVLFVINKYFQEFATGPRFQDLCQEG 864
            GELA ATNMNV ++RKQ+EVGRAARNKLIKHNLRLV+FV+NKYFQ+FA GPRFQDLCQ G
Sbjct: 242  GELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDFANGPRFQDLCQAG 301

Query: 863  AKGLITAIDRFEPKRRFRLSTYGLFWIRHAIMRSMTTSSFTRVSFGLESVRVEIQRAKLN 684
             KGLITAIDRFEP+RRF+LSTY LFWIRHAI+RSMT SSFT+VSFGLESVR EIQ+AKL 
Sbjct: 302  VKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGLESVRTEIQKAKLE 361

Query: 683  LMFDLGREPTEDEIIEKVGITRERYREVMRASKPVISLHARHAVTQEEFISGITDVDGVG 504
            L+ +L R PTE+EIIE+VGI+ ERY EV+RA+KP +SLHARHAVTQEEFI+GITD+D  G
Sbjct: 362  LLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQEEFINGITDID--G 419

Query: 503  GDKKRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 324
            GD +RQPA            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+
Sbjct: 420  GDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKY 479

Query: 323  EVKALMKLKHPARVDYLRRYI 261
            EVKALMKLKHPARVDYLRRY+
Sbjct: 480  EVKALMKLKHPARVDYLRRYV 500


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  509 bits (1312), Expect = e-142
 Identities = 265/386 (68%), Positives = 309/386 (80%), Gaps = 13/386 (3%)
 Frame = -3

Query: 1379 KGKEKANKEKSYDVVRSNKKKVKRLGLSKRIAMXXXXXXXXXXXXXXXXXXR-------- 1224
            + K+ AN+     +VR+  K++KRL L KRIA+                  +        
Sbjct: 129  RSKKSANRPGD-GIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQKDTKNEADEIDD 187

Query: 1223 -----LVREYSSSTDVVSMDWKKMKIPPVLPSSEHTWLFKLMQPMKALLQVKDDMRKSLG 1059
                 LVR+YS+STD+VS+DWKKMKIPPVLPSSEHT LFKL+QPMKAL++V+++++K LG
Sbjct: 188  DEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLG 247

Query: 1058 REVTDGELAAATNMNVPQLRKQMEVGRAARNKLIKHNLRLVLFVINKYFQEFATGPRFQD 879
            RE T+GELA ATNMNV Q+R+Q+EVGRAARNKLIKHNLRLVLFVINKYF++FA+GP+FQD
Sbjct: 248  REPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQD 307

Query: 878  LCQEGAKGLITAIDRFEPKRRFRLSTYGLFWIRHAIMRSMTTSSFTRVSFGLESVRVEIQ 699
            LCQ G KGLITAIDRFEPKR+FRLSTY LFWIRHAI+RSMT SSFTRVSFGL+SVRVEIQ
Sbjct: 308  LCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQ 367

Query: 698  RAKLNLMFDLGREPTEDEIIEKVGITRERYREVMRASKPVISLHARHAVTQEEFISGITD 519
            RAKL L+ +L R PTE EI  KVGI++ERY EVMRA+KPV SLH+RH+ T EE I+GITD
Sbjct: 368  RAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITD 427

Query: 518  VDGVGGDKKRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE 339
            V+G GGD +RQPA            LKPKESLVIRQRYGLDGKG+RTLGEIAGNLNISRE
Sbjct: 428  VEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISRE 487

Query: 338  MVRKHEVKALMKLKHPARVDYLRRYI 261
            MVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 488  MVRKHEVKALMKLKHPARVDYLRRYL 513


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  509 bits (1311), Expect = e-142
 Identities = 266/387 (68%), Positives = 309/387 (79%), Gaps = 14/387 (3%)
 Frame = -3

Query: 1379 KGKEKANKEKSYDVVRSNKKKVKRLGLSKRIAMXXXXXXXXXXXXXXXXXXR-------- 1224
            + K+ AN+     +VR+  K++KRL L KRIA+                  R        
Sbjct: 129  RSKKSANRPGD-GIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKAVPSLRKQKETKNE 187

Query: 1223 ------LVREYSSSTDVVSMDWKKMKIPPVLPSSEHTWLFKLMQPMKALLQVKDDMRKSL 1062
                  LVR+YS+STD+VS+DWKKMKIPPVLPSSEHT LFKL+QPMKAL++V+++++K L
Sbjct: 188  DDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGL 247

Query: 1061 GREVTDGELAAATNMNVPQLRKQMEVGRAARNKLIKHNLRLVLFVINKYFQEFATGPRFQ 882
            GRE T+GELA ATNMNV Q+R+Q+EVGRAARNKLIKHNLRLVLFVINKYF++FA+GP+FQ
Sbjct: 248  GREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQ 307

Query: 881  DLCQEGAKGLITAIDRFEPKRRFRLSTYGLFWIRHAIMRSMTTSSFTRVSFGLESVRVEI 702
            DLCQ G KGLITAIDRFEPKR+FRLSTY LFWIRHAI+RSMT SSFTRVSFGL+SVRVEI
Sbjct: 308  DLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI 367

Query: 701  QRAKLNLMFDLGREPTEDEIIEKVGITRERYREVMRASKPVISLHARHAVTQEEFISGIT 522
            QRAKL L+ +L R PTE EI  KVGI++ERY EVMRA+KPV SLH+RH+ T EE I+GIT
Sbjct: 368  QRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGIT 427

Query: 521  DVDGVGGDKKRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISR 342
            DV+G GGD +RQPA            LKPKESLVIRQRYGLDGKG+RTLGEIAGNLNISR
Sbjct: 428  DVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISR 487

Query: 341  EMVRKHEVKALMKLKHPARVDYLRRYI 261
            EMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 488  EMVRKHEVKALMKLKHPARVDYLRRYL 514


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 512

 Score =  505 bits (1300), Expect = e-140
 Identities = 259/381 (67%), Positives = 302/381 (79%), Gaps = 8/381 (2%)
 Frame = -3

Query: 1379 KGKEKANKEKSYDVVRSNKKKVKRLGLSKRIAMXXXXXXXXXXXXXXXXXXR-------- 1224
            K  E+ +     +VVR+  KK KRL L KRIA+                  +        
Sbjct: 132  KVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKNRVQNIDV 191

Query: 1223 LVREYSSSTDVVSMDWKKMKIPPVLPSSEHTWLFKLMQPMKALLQVKDDMRKSLGREVTD 1044
            L+R+YS+STD+VSMDWKKMKIPPVLPSSEH WLFKLMQPMKALLQ K+D+ K + +E+T 
Sbjct: 192  LIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDL-KEVDKEITG 250

Query: 1043 GELAAATNMNVPQLRKQMEVGRAARNKLIKHNLRLVLFVINKYFQEFATGPRFQDLCQEG 864
            GELA ATNM++ Q+RK +EVGRAARNKLIKHNLRLVLFVINKYFQ+FA+GPRFQDLCQ G
Sbjct: 251  GELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAG 310

Query: 863  AKGLITAIDRFEPKRRFRLSTYGLFWIRHAIMRSMTTSSFTRVSFGLESVRVEIQRAKLN 684
             KGLITAIDRFEPKRR +LSTY LFWIRH+I+RS+T SSFTRV FGLE VRV+IQR KL 
Sbjct: 311  VKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLK 370

Query: 683  LMFDLGREPTEDEIIEKVGITRERYREVMRASKPVISLHARHAVTQEEFISGITDVDGVG 504
            L F+L R PTE+E++E++GI+ ERY EVM+ASKP++SLH+RH  TQEE+I+GITDVDGV 
Sbjct: 371  LTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGITDVDGVN 430

Query: 503  GDKKRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 324
            GD +RQ A            LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE+VRKH
Sbjct: 431  GDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREIVRKH 490

Query: 323  EVKALMKLKHPARVDYLRRYI 261
            EVKALMKLKHPAR+DYLRRY+
Sbjct: 491  EVKALMKLKHPARLDYLRRYV 511