BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00014359
         (1625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...   627   e-177
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi...   573   e-161
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi...   569   e-160
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2...   563   e-158
ref|NP_680234.1| pentatricopeptide repeat-containing protein [Ar...   456   e-125

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial [Vitis vinifera]
            gi|297745328|emb|CBI40408.3| unnamed protein product
            [Vitis vinifera]
          Length = 765

 Score =  627 bits (1618), Expect = e-177
 Identities = 308/515 (59%), Positives = 396/515 (76%)
 Frame = +2

Query: 11   VNGREVIELVKKLGEHGVFPNGEMLTKLITRLGRSGNNGQAWELLHMAMKMDSSVVEASS 190
            V+  E++ LV K  EH VFPN   LT+LI+RL RSG   +AW++LH  MK+   V+EA+S
Sbjct: 249  VDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKL-GGVMEAAS 307

Query: 191  INSLLVGLARENDFRKMNLLLSEMKGIGVRPNGKTFGIIIHHLCKSRRVDEALHVLDNMK 370
             N+LL  L R  +F++MN LL+EMK + ++PN  TFGI+I+HLCK RRVDEAL V + M 
Sbjct: 308  CNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMN 367

Query: 371  KNEENGGANVVPDIFTYNTVIKGLCVVGRQEEGLVLVDKMKSEHGYVPNIVTYNALIDGF 550
              E NG   V PD+ TYNT+I GLC VGRQEEGL LV++M+S+   +PN VTYN LIDG+
Sbjct: 368  GGESNGFL-VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGY 426

Query: 551  CKSGEIERSWELFDQMKKDEVPPDVITLNTLVDGMCKHGRISSALEFFGDMQRKGLNGNV 730
            CK+  IE + ELFDQM KD VPP+V+TLNTLVDGMCKHGRI+ A+EFF +MQ KGL GN 
Sbjct: 427  CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA 486

Query: 731  ITYTSLISALCNVNNFDRAMNLFDEMVSSHCIPDSIVFYSLINGFSRAGRLDDACSVVSK 910
            +TYT+LI A CNVNN ++AM LFDEM+ + C PD+IV+Y+LI+G S+AG+LD A  V+SK
Sbjct: 487  VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546

Query: 911  MKSAGFFLDAVSYNVLISGFCKKKKLDKVYELMEEMAAAGIRPDEVTYNTLIATFSKSEN 1090
            MK AGF  D VS+NVLI+GFC+K KLD+ YE+++EM  AGI+PD VTYNTLI+ FSK+ +
Sbjct: 547  MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606

Query: 1091 FSSVHQWMAKMTEQGLVPTAFTYGAVIHGYCRADKLDEAVEIFTQMGASSKVPPNTVIYN 1270
            FS+ H+ M KM ++GLVPT  TYGA+IH YC    LDEA++IF  M ++SKVPPNTVIYN
Sbjct: 607  FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666

Query: 1271 ILIDSLCKAKRLQDALSLMEDMKVKGMTPNVVTYNAILKGLRDRNYLDKAFELLDTMNEQ 1450
            ILI+SLC+  ++  ALSLM+DMKVKG+ PN  T+NA+ KGL+++N+L KAFEL+D M E 
Sbjct: 667  ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726

Query: 1451 AVTPDFVTLEILTDWFSGAGETMKLKKFVQGNPIS 1555
            A  PD++T+EILT+W S  GET KLK FVQG  +S
Sbjct: 727  ACNPDYITMEILTEWLSAVGETAKLKSFVQGYEVS 761



 Score =  198 bits (504), Expect = 3e-48
 Identities = 124/416 (29%), Positives = 212/416 (50%), Gaps = 12/416 (2%)
 Frame = +2

Query: 302  IIIHHLCKSRRVDEALHVLDNMKKNEENGGANVVPDIFTYNTVIKGLC---VVGR---QE 463
            I+I  L +  RVD+ALH+LD M + +    A   P+  T + V   L     VGR   +E
Sbjct: 197  ILIDVLFRKGRVDDALHLLDEMLQPK----AEFPPNSNTGHIVFSALSKRDKVGRAVDEE 252

Query: 464  EGLVLVDKMKSEHGYVPNIVTYNALIDGFCKSGEIERSWELFDQMKKDEVPPDVITLNTL 643
            E + LV K  +EH   PN +    LI   C+SG  +R+W++   + K     +  + N L
Sbjct: 253  EIVGLVSKF-AEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNAL 311

Query: 644  VDGMCKHGRISSALEFFGDMQRKGLNGNVITYTSLISALCNVNNFDRAMNLFDEMVSSH- 820
            +  + +            +M+   +  NV+T+  LI+ LC     D A+ +F++M     
Sbjct: 312  LTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGES 371

Query: 821  ----CIPDSIVFYSLINGFSRAGRLDDACSVVSKMKSAGFFL-DAVSYNVLISGFCKKKK 985
                  PD I + +LI+G  + GR ++   +V +M+S    + + V+YN LI G+CK   
Sbjct: 372  NGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASM 431

Query: 986  LDKVYELMEEMAAAGIRPDEVTYNTLIATFSKSENFSSVHQWMAKMTEQGLVPTAFTYGA 1165
            ++   EL ++M   G+ P+ VT NTL+    K    +   ++  +M  +GL   A TY A
Sbjct: 432  IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491

Query: 1166 VIHGYCRADKLDEAVEIFTQMGASSKVPPNTVIYNILIDSLCKAKRLQDALSLMEDMKVK 1345
            +I  +C  + +++A+E+F +M   +   P+ ++Y  LI  L +A +L  A  ++  MK  
Sbjct: 492  LIRAFCNVNNIEKAMELFDEM-LEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550

Query: 1346 GMTPNVVTYNAILKGLRDRNYLDKAFELLDTMNEQAVTPDFVTLEILTDWFSGAGE 1513
            G +P++V++N ++ G   +N LD+A+E+L  M    + PD VT   L   FS  G+
Sbjct: 551  GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606



 Score =  132 bits (333), Expect = 2e-28
 Identities = 105/418 (25%), Positives = 178/418 (42%), Gaps = 51/418 (12%)
 Frame = +2

Query: 413  FTYNTVIKGLCVVGRQEEGLVLVDKMKSEHGYVPNIVTYNALIDGFCKSGEIERSWELFD 592
            FT   V +           L+ + K    H    ++     LI  F ++  ++ S+ +++
Sbjct: 124  FTLEAVFEHASREPNSHNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYN 183

Query: 593  QMKKDEVPPDVIT--LNTLVDGMCKHGRISSALEFFGDMQRK------------------ 712
            ++     P   +T   N L+D + + GR+  AL    +M +                   
Sbjct: 184  EL----CPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSAL 239

Query: 713  ----------------GLNG---------NVITYTSLISALCNVNNFDRAMNLFDEMVSS 817
                            GL           N I  T LIS LC     DRA ++   ++  
Sbjct: 240  SKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKL 299

Query: 818  HCIPDSIVFYSLINGFSRAGRLDDACSVVSKMKSAGFFLDAVSYNVLISGFCKKKKLDKV 997
              + ++    +L+    RA       +++++MK      + V++ +LI+  CK +++D+ 
Sbjct: 300  GGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEA 359

Query: 998  YELMEEMAAAG-----IRPDEVTYNTLIATFSKSENFSSVHQWMAKMTEQ-GLVPTAFTY 1159
             E+ E+M         + PD +TYNTLI    K          + +M  Q   +P   TY
Sbjct: 360  LEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTY 419

Query: 1160 GAVIHGYCRADKLDEAVEIFTQMGASSKVPPNTVIYNILIDSLCKAKRLQDALSLMEDMK 1339
              +I GYC+A  ++ A E+F QM     VPPN V  N L+D +CK  R+  A+    +M+
Sbjct: 420  NCLIDGYCKASMIEAARELFDQMNKDG-VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478

Query: 1340 VKGMTPNVVTYNAILKGLRDRNYLDKAFELLDTMNEQAVTPDFVTLEILTDWFSGAGE 1513
             KG+  N VTY A+++   + N ++KA EL D M E   +PD +    L    S AG+
Sbjct: 479  GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGK 536


>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Cucumis sativus]
            gi|449475521|ref|XP_004154479.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  573 bits (1478), Expect = e-161
 Identities = 285/509 (55%), Positives = 372/509 (73%), Gaps = 2/509 (0%)
 Frame = +2

Query: 23   EVIELVKKLGEHGVFPNGEMLTKLITRLGRSGNNGQAWELLHMAMKMDSSVVEASSINSL 202
            E+  LV K G+H +FP+   LT+LI++L RSGN   AW +L   M ++  + +A+  N+L
Sbjct: 100  EIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNG-LKDAAPCNAL 158

Query: 203  LVGLARENDFRKMNLLLSEMKGIGVRPNGKTFGIIIHHLCKSRRVDEALHVLDNMKKNEE 382
            L GL +  +F KMNLL+ +MK + ++P   TFGI+I+HLCK RR+D+AL V + MK  +E
Sbjct: 159  LTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKE 218

Query: 383  NGGANVVPDIFTYNTVIKGLCVVGRQEEGLVLVDKMKSEHGYVPNIVTYNALIDGFCKSG 562
                 V PD   YNT+I GLC VGRQEE L L+ KM+S+    P   T+N LI+G+C+SG
Sbjct: 219  ETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQ-CAPTTATFNCLINGYCRSG 277

Query: 563  EIERSWELFDQMKKDEVPPDVITLNTLVDGMCKHGRISSALEFFGDMQRKGLNGNVITYT 742
            EIE + +LF++M+  ++ P+VITLNTLVDGMCKH RIS+A+EFF  MQ+KGL GN +TYT
Sbjct: 278  EIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYT 337

Query: 743  SLISALCNVNNFDRAMNLFDEMVSSHCIPDSIVFYSLINGFSRAGRLDDACSVVSKMKSA 922
              I+A CNVNN ++AM   DEM    C PD++V+Y+LI G ++AGRLDDA SVVSK+K A
Sbjct: 338  VFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEA 397

Query: 923  GFFLDAVSYNVLISGFCKKKKLDKVYELMEEMAAAGIRPDEVTYNTLIATFSKSENFSSV 1102
            GF LD V YNVLIS FCKK KLD+  E + EM  AG++PD VTYNTLI+ FSK  NF   
Sbjct: 398  GFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLA 457

Query: 1103 HQWMAKMT-EQGLVPTAFTYGAVIHGYCRADKLDEAVEIFTQM-GASSKVPPNTVIYNIL 1276
            H++M KMT E+GL PT FTYGA+IH YC  + +DEA++IF +M   +SKVPPNTVIYNIL
Sbjct: 458  HKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNIL 517

Query: 1277 IDSLCKAKRLQDALSLMEDMKVKGMTPNVVTYNAILKGLRDRNYLDKAFELLDTMNEQAV 1456
            IDSLCK  ++  ALSL++DMK +G+ PN  TYN+I K LRD+N+LDKAF+L+D M EQA 
Sbjct: 518  IDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQAC 577

Query: 1457 TPDFVTLEILTDWFSGAGETMKLKKFVQG 1543
             PD++T+EILT+W S  GE  KLKKF QG
Sbjct: 578  NPDYITMEILTEWLSAVGEITKLKKFTQG 606



 Score =  131 bits (330), Expect = 4e-28
 Identities = 82/293 (27%), Positives = 137/293 (46%), Gaps = 17/293 (5%)
 Frame = +2

Query: 665  GRISSALEFFGDMQRKGLNGNVITYTSLISALCNVNNFDRAMNLFDEMVSSHCIPDS--- 835
            G +  AL  F  +     N NV     +I+ L      D AMN+ DEM+    +P+S   
Sbjct: 20   GMVDEALAAFSTLDSHAKNTNV--RNEIINLLLKSGRVDNAMNVLDEML----LPESEFR 73

Query: 836  -------IVFYSLINGFSRAGRL--DDACSVVSKMKSAGFFLDAVSYNVLISGFCKKKKL 988
                   IVF +L+      GR+  D+   +VSK      F D ++   LIS  C+    
Sbjct: 74   PNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNT 133

Query: 989  DKVYELMEEMAAAGIRPDEVTYNTLIATFSKSENFSSVHQWMAKMTEQGLVPTAFTYGAV 1168
            +  + +++ +       D    N L+    K+  F  ++  M KM +  + PT  T+G +
Sbjct: 134  NLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGIL 193

Query: 1169 IHGYCRADKLDEAVEIFTQMGASSK-----VPPNTVIYNILIDSLCKAKRLQDALSLMED 1333
            I+  C+  ++D+A+E+F +M    +     V P+T++YN LID LCK  R ++AL LM  
Sbjct: 194  INHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGK 253

Query: 1334 MKVKGMTPNVVTYNAILKGLRDRNYLDKAFELLDTMNEQAVTPDFVTLEILTD 1492
            M+     P   T+N ++ G      ++ A +L + M    + P+ +TL  L D
Sbjct: 254  MRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVD 306


>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Glycine max]
          Length = 746

 Score =  569 bits (1466), Expect = e-160
 Identities = 279/507 (55%), Positives = 374/507 (73%)
 Frame = +2

Query: 23   EVIELVKKLGEHGVFPNGEMLTKLITRLGRSGNNGQAWELLHMAMKMDSSVVEASSINSL 202
            EV+ LV KLGE GVFP+G  LT+L+ +L     NG AWE+LH  M++  +V +A+S N+L
Sbjct: 229  EVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAV-DAASCNAL 287

Query: 203  LVGLARENDFRKMNLLLSEMKGIGVRPNGKTFGIIIHHLCKSRRVDEALHVLDNMKKNEE 382
            L  L R  D ++MN LL+EM+   +RP+  TFGI+++HLCK+RR+DEAL V D ++    
Sbjct: 288  LTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGG 347

Query: 383  NGGANVVPDIFTYNTVIKGLCVVGRQEEGLVLVDKMKSEHGYVPNIVTYNALIDGFCKSG 562
            +    V PD+  +NT+I GLC VG++E+GL L+++MK  +   PN VTYN LIDGF K+G
Sbjct: 348  SNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAG 407

Query: 563  EIERSWELFDQMKKDEVPPDVITLNTLVDGMCKHGRISSALEFFGDMQRKGLNGNVITYT 742
              +R+ ELF QM ++ V P+VITLNTLVDG+CKHGR+  A+EFF +M+ KGL GN  TYT
Sbjct: 408  NFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYT 467

Query: 743  SLISALCNVNNFDRAMNLFDEMVSSHCIPDSIVFYSLINGFSRAGRLDDACSVVSKMKSA 922
            +LISA C VNN +RAM  F+EM+SS C PD++V+YSLI+G   AGR++DA  VVSK+K A
Sbjct: 468  ALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLA 527

Query: 923  GFFLDAVSYNVLISGFCKKKKLDKVYELMEEMAAAGIRPDEVTYNTLIATFSKSENFSSV 1102
            GF LD   YNVLISGFCKKKKL++VYEL+ EM   G++PD +TYNTLI+   K+ +F++ 
Sbjct: 528  GFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATA 587

Query: 1103 HQWMAKMTEQGLVPTAFTYGAVIHGYCRADKLDEAVEIFTQMGASSKVPPNTVIYNILID 1282
             + M KM ++GL P+  TYGA+IH YC    +DE ++IF +M ++SKVPPNTVIYNILID
Sbjct: 588  SKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILID 647

Query: 1283 SLCKAKRLQDALSLMEDMKVKGMTPNVVTYNAILKGLRDRNYLDKAFELLDTMNEQAVTP 1462
            +LC+   +  A+SLMEDMKVK + PN  TYNAILKG+RD+  L KAFEL+D M E+A  P
Sbjct: 648  ALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRP 707

Query: 1463 DFVTLEILTDWFSGAGETMKLKKFVQG 1543
            D++T+E+LT+W S  GE  KLK FV+G
Sbjct: 708  DYITMEVLTEWLSAVGEIEKLKHFVEG 734



 Score =  177 bits (448), Expect = 9e-42
 Identities = 116/419 (27%), Positives = 201/419 (47%), Gaps = 7/419 (1%)
 Frame = +2

Query: 305  IIHHLCKSRRVDEALHVLDNMKKNEENGGANVVPDIFTYNTVIKGLCVVGRQEEGLVLVD 484
            ++  L KS R  +ALHVLD M   + N G +V  +I     V  G      +  GLV   
Sbjct: 180  LLRVLLKSGRAGDALHVLDEMP--QANSGFSVTGEIVFGELVRSGRSFPDGEVVGLV--- 234

Query: 485  KMKSEHGYVPNIVTYNALIDGFCKSGEIERSWELFDQMKKDEVPPDVITLNTLVDGMCKH 664
                E G  P+      L+   C   +   +WE+   + +     D  + N L+  + + 
Sbjct: 235  AKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRG 294

Query: 665  GRISSALEFFGDMQRKGLNGNVITYTSLISALCNVNNFDRAMNLFDEM---VSSHCI--- 826
              I    E   +M+++ +  +V+T+  L++ LC     D A+ +FD +     S+ +   
Sbjct: 295  RDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVE 354

Query: 827  PDSIVFYSLINGFSRAGRLDDACSVVSKMKSAGFFL-DAVSYNVLISGFCKKKKLDKVYE 1003
            PD ++F +LI+G  + G+ +D  S++ +MK       + V+YN LI GF K    D+ +E
Sbjct: 355  PDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHE 414

Query: 1004 LMEEMAAAGIRPDEVTYNTLIATFSKSENFSSVHQWMAKMTEQGLVPTAFTYGAVIHGYC 1183
            L  +M   G++P+ +T NTL+    K        ++  +M  +GL   A TY A+I  +C
Sbjct: 415  LFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFC 474

Query: 1184 RADKLDEAVEIFTQMGASSKVPPNTVIYNILIDSLCKAKRLQDALSLMEDMKVKGMTPNV 1363
              + ++ A++ F +M  SS   P+ V+Y  LI  LC A R+ DA  ++  +K+ G + + 
Sbjct: 475  GVNNINRAMQCFEEM-LSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDR 533

Query: 1364 VTYNAILKGLRDRNYLDKAFELLDTMNEQAVTPDFVTLEILTDWFSGAGETMKLKKFVQ 1540
              YN ++ G   +  L++ +ELL  M E  V PD +T   L  +    G+     K ++
Sbjct: 534  SCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVME 592


>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
            predicted protein [Populus trichocarpa]
          Length = 775

 Score =  563 bits (1451), Expect = e-158
 Identities = 274/520 (52%), Positives = 382/520 (73%), Gaps = 2/520 (0%)
 Frame = +2

Query: 2    DQLVNGREVIELVKKLGEHGVFPNGEMLTKLITRLGRSGNNGQAWELLHMAMKMDSSVVE 181
            ++L++  E++ LV K GEHGV  +   + +LITRL R+    + W+L    +K+  +V+E
Sbjct: 246  EELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKL-GAVLE 304

Query: 182  ASSINSLLVGLARENDFRKMNLLLSEMKGIGVRPNGKTFGIIIHHLCKSRRVDEALHVLD 361
            +++ NSLL GLARE +F +MN L+ +M  + ++PN  TFGI+I+H+CK RRVD+AL VL+
Sbjct: 305  SAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLE 364

Query: 362  NMKKNEENGG--ANVVPDIFTYNTVIKGLCVVGRQEEGLVLVDKMKSEHGYVPNIVTYNA 535
             M   +E+GG   +V PD+  YNT+I GLC VGRQ+EGL L+++M+S+ G  P+ +TYN 
Sbjct: 365  KMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNC 424

Query: 536  LIDGFCKSGEIERSWELFDQMKKDEVPPDVITLNTLVDGMCKHGRISSALEFFGDMQRKG 715
            LIDGFCK+GEIE+  ELFD+M K+ V P+V+T+NTLV GMC+ GR+SSA+ FF + QR+G
Sbjct: 425  LIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRG 484

Query: 716  LNGNVITYTSLISALCNVNNFDRAMNLFDEMVSSHCIPDSIVFYSLINGFSRAGRLDDAC 895
            + G+ +TYT+LI+A CNVNNF++AM LF+EM+ S C PD+IV+Y+LI+GFS+AGR+ DA 
Sbjct: 485  MKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADAS 544

Query: 896  SVVSKMKSAGFFLDAVSYNVLISGFCKKKKLDKVYELMEEMAAAGIRPDEVTYNTLIATF 1075
             V++++K  G   D V YN LI GFC+  K  +V+E+++EM  AG++PD +TYNTLIA  
Sbjct: 545  FVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYA 604

Query: 1076 SKSENFSSVHQWMAKMTEQGLVPTAFTYGAVIHGYCRADKLDEAVEIFTQMGASSKVPPN 1255
            SK+ +     + M KM + G+VPT  TYGAVI+ YC     +EA+EIF  M A+SKVPPN
Sbjct: 605  SKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPN 664

Query: 1256 TVIYNILIDSLCKAKRLQDALSLMEDMKVKGMTPNVVTYNAILKGLRDRNYLDKAFELLD 1435
            TVIYNILI+SLCK  +++ A+SLMEDMK+ G+TPN  TYNAI KGLRD   L+K FE +D
Sbjct: 665  TVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMD 724

Query: 1436 TMNEQAVTPDFVTLEILTDWFSGAGETMKLKKFVQGNPIS 1555
             M E A  PD++T+EILT+W S  GE  +LKKFV G  +S
Sbjct: 725  RMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCEVS 764


>ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g28460 gi|9502149|gb|AAF88002.1| contains similarity
            to Pfam family PF01535 (Domain of unknown function),
            score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
            gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120
            [Arabidopsis thaliana] gi|27363272|gb|AAO11555.1|
            At5g28460/F21B23_120 [Arabidopsis thaliana]
            gi|332006418|gb|AED93801.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 766

 Score =  456 bits (1172), Expect = e-125
 Identities = 229/518 (44%), Positives = 343/518 (66%)
 Frame = +2

Query: 2    DQLVNGREVIELVKKLGEHGVFPNGEMLTKLITRLGRSGNNGQAWELLHMAMKMDSSVVE 181
            ++L+   ++I L+ +   HGV PN   LT+ I+ L ++     AW++L   MK + + +E
Sbjct: 235  ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMK-NKTPLE 293

Query: 182  ASSINSLLVGLARENDFRKMNLLLSEMKGIGVRPNGKTFGIIIHHLCKSRRVDEALHVLD 361
            A   N+LL  L R  D  +MN L+ +M  + +RP+  T GI+I+ LCKSRRVDEAL V +
Sbjct: 294  APPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353

Query: 362  NMKKNEENGGANVVPDIFTYNTVIKGLCVVGRQEEGLVLVDKMKSEHGYVPNIVTYNALI 541
             M+    + G  +  D   +NT+I GLC VGR +E   L+ +MK E   VPN VTYN LI
Sbjct: 354  QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLI 413

Query: 542  DGFCKSGEIERSWELFDQMKKDEVPPDVITLNTLVDGMCKHGRISSALEFFGDMQRKGLN 721
            DG+C++G++E + E+  +MK+DE+ P+V+T+NT+V GMC+H  ++ A+ FF DM+++G+ 
Sbjct: 414  DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473

Query: 722  GNVITYTSLISALCNVNNFDRAMNLFDEMVSSHCIPDSIVFYSLINGFSRAGRLDDACSV 901
            GNV+TY +LI A C+V+N ++AM  +++M+ + C PD+ ++Y+LI+G  +  R  DA  V
Sbjct: 474  GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533

Query: 902  VSKMKSAGFFLDAVSYNVLISGFCKKKKLDKVYELMEEMAAAGIRPDEVTYNTLIATFSK 1081
            V K+K  GF LD ++YN+LI  FC K   +KVYE++ +M   G +PD +TYNTLI+ F K
Sbjct: 534  VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593

Query: 1082 SENFSSVHQWMAKMTEQGLVPTAFTYGAVIHGYCRADKLDEAVEIFTQMGASSKVPPNTV 1261
             ++F SV + M +M E GL PT  TYGAVI  YC   +LDEA+++F  MG  SKV PNTV
Sbjct: 594  HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653

Query: 1262 IYNILIDSLCKAKRLQDALSLMEDMKVKGMTPNVVTYNAILKGLRDRNYLDKAFELLDTM 1441
            IYNILI++  K      ALSL E+MK+K + PNV TYNA+ K L ++   +   +L+D M
Sbjct: 654  IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713

Query: 1442 NEQAVTPDFVTLEILTDWFSGAGETMKLKKFVQGNPIS 1555
             EQ+  P+ +T+EIL +  SG+ E +KL+KF+QG  ++
Sbjct: 714  VEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVA 751



 Score =  174 bits (442), Expect = 5e-41
 Identities = 116/453 (25%), Positives = 194/453 (42%), Gaps = 43/453 (9%)
 Frame = +2

Query: 284  NGKTFGIIIHHLCKSRRVDEALHVLDNMKKNEENGGAN-VVPDIFTYNTVIKGLCVVGRQ 460
            N +   +++  L ++  VD+A  VLD M + E     N +  DI  +    + L      
Sbjct: 184  NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLT---- 239

Query: 461  EEGLVLVDKMKSEHGYVPNIVTYNALIDGFCKSGEIERSWELFDQMKKDEVP-------- 616
            EE ++ +    S HG  PN V     I   CK+     +W++   + K++ P        
Sbjct: 240  EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299

Query: 617  ---------------------------PDVITLNTLVDGMCKHGRISSALEFFGDMQRKG 715
                                       PDV+TL  L++ +CK  R+  ALE F  M+ K 
Sbjct: 300  LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359

Query: 716  L-NGNVIT-----YTSLISALCNVNNFDRAMNLFDEM-VSSHCIPDSIVFYSLINGFSRA 874
              +GNVI      + +LI  LC V     A  L   M +   C+P+++ +  LI+G+ RA
Sbjct: 360  TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419

Query: 875  GRLDDACSVVSKMKSAGFFLDAVSYNVLISGFCKKKKLDKVYELMEEMAAAGIRPDEVTY 1054
            G+L+ A  VVS+MK      + V+ N ++ G C+   L+       +M   G++ + VTY
Sbjct: 420  GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479

Query: 1055 NTLIATFSKSENFSSVHQWMAKMTEQGLVPTAFTYGAVIHGYCRADKLDEAVEIFTQMGA 1234
             TLI       N      W  KM E G  P A  Y A+I G C+  +  +A+ +  ++  
Sbjct: 480  MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL-K 538

Query: 1235 SSKVPPNTVIYNILIDSLCKAKRLQDALSLMEDMKVKGMTPNVVTYNAILKGLRDRNYLD 1414
                  + + YN+LI   C     +    ++ DM+ +G  P+ +TYN ++         +
Sbjct: 539  EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598

Query: 1415 KAFELLDTMNEQAVTPDFVTLEILTDWFSGAGE 1513
                +++ M E  + P   T   + D +   GE
Sbjct: 599  SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631