BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00013306
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   480   e-133
ref|XP_002511689.1| DNA repair and recombination protein radA, p...   472   e-131
dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombinat...   457   e-126
ref|NP_566040.1| DNA repair protein RAD51-like 3 [Arabidopsis th...   457   e-126
emb|CAC14091.1| RAD51C protein [Arabidopsis thaliana]                 455   e-126

>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
            gi|296089196|emb|CBI38899.3| unnamed protein product
            [Vitis vinifera]
          Length = 346

 Score =  480 bits (1236), Expect = e-133
 Identities = 244/346 (70%), Positives = 281/346 (81%), Gaps = 2/346 (0%)
 Frame = -1

Query: 1082 MEVCNLPLSPSQRSKLVSAGYTTXXXXXXXXXSHLARDLNVSRDEASQILNTALQSNRFN 903
            ME+  LP+S SQR KL+SAGYT+         S LA+DL +S +EA +IL    Q +R +
Sbjct: 1    MELARLPISASQRGKLISAGYTSLSSLSSLSPSTLAQDLKISDNEALEILRVVSQGSRLD 60

Query: 902  P--NTNAIVAGAQTAWEMLHEEEFITRVTTSCKDLDNILGGGINCKEVTEIGGVPGIGKT 729
                ++AIV GAQTAW+MLHEEE +  +TTSC DLD+ILGGGI CKEVTEIGGVPGIGKT
Sbjct: 61   KPDGSHAIVNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKT 120

Query: 728  QLGIQLAVNVQIPVECGGLGGKVIYIDTEGSFMVERVFQIAEACIEDLLESYDFQQKDFQ 549
            QLGIQLAVNVQIPV  GGLGGK IYIDTEGSFM+ER  QIAEACIED+  + DF QKDFQ
Sbjct: 121  QLGIQLAVNVQIPVNYGGLGGKAIYIDTEGSFMLERSLQIAEACIEDMSGNSDFLQKDFQ 180

Query: 548  TCKAKMQPKTFLSNIFYFRVCSYTEQIALINYLEKFLAENRDVKILIIDSVTFHFRQDFD 369
            +C+ K QPK FL NIFYFRVCSYTEQIA+INYL+KF++E++DV ++IIDSVTFHFRQDFD
Sbjct: 181  SCQVKAQPKDFLQNIFYFRVCSYTEQIAMINYLDKFISEHKDVNVVIIDSVTFHFRQDFD 240

Query: 368  DLALRTRVLSGIALKLMKLAKNFSLAVVLLNQVTTKFTEGSFQLTLALGDSWSHACTNRV 189
            DLALRTR+LSG+ALKLMKLAK FSLAVVLLNQVTTK TEGSFQLTLALGDSWSH+CTNRV
Sbjct: 241  DLALRTRLLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRV 300

Query: 188  ILHWNGNERYAYIDKXXXXXXXXXXXAVTSKGIRDTASHCKRIRMM 51
            IL+WNG+ERYAYIDK           +VT KGIR   S CKRI++M
Sbjct: 301  ILYWNGDERYAYIDKSPSLRSASAPYSVTGKGIRTATSKCKRIKIM 346


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
            communis] gi|223548869|gb|EEF50358.1| DNA repair and
            recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score =  472 bits (1214), Expect = e-131
 Identities = 235/346 (67%), Positives = 279/346 (80%), Gaps = 2/346 (0%)
 Frame = -1

Query: 1082 MEVCNLPLSPSQRSKLVSAGYTTXXXXXXXXXSHLARDLNVSRDEASQILNTALQSNRFN 903
            MEV  LPLS SQR KL+ AGYT+         S LARDL +S  EA +IL  A +++R +
Sbjct: 1    MEVSRLPLSASQRGKLILAGYTSLSSLSSVSPSDLARDLKISDSEALEILKVASRNSRLD 60

Query: 902  --PNTNAIVAGAQTAWEMLHEEEFITRVTTSCKDLDNILGGGINCKEVTEIGGVPGIGKT 729
                 +A++ GAQ AWEMLHEE  +TR+TTSC DLDNILGGGI CKEVTEIGG+PGIGKT
Sbjct: 61   GMEGCHAVINGAQNAWEMLHEESSLTRITTSCADLDNILGGGITCKEVTEIGGLPGIGKT 120

Query: 728  QLGIQLAVNVQIPVECGGLGGKVIYIDTEGSFMVERVFQIAEACIEDLLESYDFQQKDFQ 549
            QLGIQLAVNVQIP  CGGLGGK +YIDTEGSFMVERV Q+AEA +ED+LE   F ++D Q
Sbjct: 121  QLGIQLAVNVQIPPYCGGLGGKAVYIDTEGSFMVERVLQVAEASVEDMLEYSRFLRRDLQ 180

Query: 548  TCKAKMQPKTFLSNIFYFRVCSYTEQIALINYLEKFLAENRDVKILIIDSVTFHFRQDFD 369
            TC+   Q K  L NI+YFRVCSYTEQ+AL+NYLEKF++E+RDVK++IIDS+TFHFRQDFD
Sbjct: 181  TCQVATQSKDILENIYYFRVCSYTEQVALVNYLEKFISEHRDVKVVIIDSITFHFRQDFD 240

Query: 368  DLALRTRVLSGIALKLMKLAKNFSLAVVLLNQVTTKFTEGSFQLTLALGDSWSHACTNRV 189
            DLALRTRVLSG+ALKLMK+AK+FSLAVVLLNQVTTK TEGSFQL LALG+SWSH+CTNR+
Sbjct: 241  DLALRTRVLSGMALKLMKIAKSFSLAVVLLNQVTTKHTEGSFQLGLALGESWSHSCTNRI 300

Query: 188  ILHWNGNERYAYIDKXXXXXXXXXXXAVTSKGIRDTASHCKRIRMM 51
            IL+WN NERYAYIDK           +VT  GIR+++S+CKR++MM
Sbjct: 301  ILYWNSNERYAYIDKSPSLKSATAPYSVTRGGIRNSSSNCKRVKMM 346


>dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombination factor
            [Arabidopsis thaliana]
          Length = 342

 Score =  457 bits (1175), Expect = e-126
 Identities = 227/344 (65%), Positives = 274/344 (79%)
 Frame = -1

Query: 1082 MEVCNLPLSPSQRSKLVSAGYTTXXXXXXXXXSHLARDLNVSRDEASQILNTALQSNRFN 903
            ME   LPLSPS R KL+SAGYT          S LARD N++ +EA +IL  A QS    
Sbjct: 1    MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQS--CC 58

Query: 902  PNTNAIVAGAQTAWEMLHEEEFITRVTTSCKDLDNILGGGINCKEVTEIGGVPGIGKTQL 723
              + +++ GA+ AW+MLHEEE + R+TTSC DLDNILGGGI+C++VTEIGGVPGIGKTQ+
Sbjct: 59   NGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQI 118

Query: 722  GIQLAVNVQIPVECGGLGGKVIYIDTEGSFMVERVFQIAEACIEDLLESYDFQQKDFQTC 543
            GIQL+VNVQIP ECGGLGGK IYIDTEGSFMVER  QIAEAC+ED+ E   +  K FQ  
Sbjct: 119  GIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQAN 178

Query: 542  KAKMQPKTFLSNIFYFRVCSYTEQIALINYLEKFLAENRDVKILIIDSVTFHFRQDFDDL 363
            + +M+P+  L NIFYFRVCSYTEQIAL+N+LEKF++EN+DVK++I+DS+TFHFRQD+DDL
Sbjct: 179  QVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYDDL 238

Query: 362  ALRTRVLSGIALKLMKLAKNFSLAVVLLNQVTTKFTEGSFQLTLALGDSWSHACTNRVIL 183
            A RTRVLS +ALK MKLAK FSLAVVLLNQVTTKF+EGSFQL LALGDSWSH+CTNRVIL
Sbjct: 239  AQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVIL 298

Query: 182  HWNGNERYAYIDKXXXXXXXXXXXAVTSKGIRDTASHCKRIRMM 51
            +WNG+ERYAYIDK            VTS+G+R+++S  KR++MM
Sbjct: 299  YWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 342


>ref|NP_566040.1| DNA repair protein RAD51-like 3 [Arabidopsis thaliana]
            gi|55583940|sp|Q8GXF0.2|RA51C_ARATH RecName: Full=DNA
            repair protein RAD51 homolog 3; AltName: Full=DNA
            repair-recombination protein RAD51C; Short=AtRAD51C
            gi|11064475|emb|CAC14294.1| Rad51C protein [Arabidopsis
            thaliana] gi|15425731|dbj|BAB64343.1| AtRAD51Calpha
            [Arabidopsis thaliana] gi|20196911|gb|AAB82635.2|
            putative RAD51C-like DNA repair protein [Arabidopsis
            thaliana] gi|330255439|gb|AEC10533.1| DNA repair protein
            RAD51-like 3 [Arabidopsis thaliana]
          Length = 363

 Score =  457 bits (1175), Expect = e-126
 Identities = 227/344 (65%), Positives = 274/344 (79%)
 Frame = -1

Query: 1082 MEVCNLPLSPSQRSKLVSAGYTTXXXXXXXXXSHLARDLNVSRDEASQILNTALQSNRFN 903
            ME   LPLSPS R KL+SAGYT          S LARD N++ +EA +IL  A QS    
Sbjct: 22   MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQS--CC 79

Query: 902  PNTNAIVAGAQTAWEMLHEEEFITRVTTSCKDLDNILGGGINCKEVTEIGGVPGIGKTQL 723
              + +++ GA+ AW+MLHEEE + R+TTSC DLDNILGGGI+C++VTEIGGVPGIGKTQ+
Sbjct: 80   NGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQI 139

Query: 722  GIQLAVNVQIPVECGGLGGKVIYIDTEGSFMVERVFQIAEACIEDLLESYDFQQKDFQTC 543
            GIQL+VNVQIP ECGGLGGK IYIDTEGSFMVER  QIAEAC+ED+ E   +  K FQ  
Sbjct: 140  GIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQAN 199

Query: 542  KAKMQPKTFLSNIFYFRVCSYTEQIALINYLEKFLAENRDVKILIIDSVTFHFRQDFDDL 363
            + +M+P+  L NIFYFRVCSYTEQIAL+N+LEKF++EN+DVK++I+DS+TFHFRQD+DDL
Sbjct: 200  QVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYDDL 259

Query: 362  ALRTRVLSGIALKLMKLAKNFSLAVVLLNQVTTKFTEGSFQLTLALGDSWSHACTNRVIL 183
            A RTRVLS +ALK MKLAK FSLAVVLLNQVTTKF+EGSFQL LALGDSWSH+CTNRVIL
Sbjct: 260  AQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVIL 319

Query: 182  HWNGNERYAYIDKXXXXXXXXXXXAVTSKGIRDTASHCKRIRMM 51
            +WNG+ERYAYIDK            VTS+G+R+++S  KR++MM
Sbjct: 320  YWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 363


>emb|CAC14091.1| RAD51C protein [Arabidopsis thaliana]
          Length = 363

 Score =  455 bits (1171), Expect = e-126
 Identities = 226/344 (65%), Positives = 274/344 (79%)
 Frame = -1

Query: 1082 MEVCNLPLSPSQRSKLVSAGYTTXXXXXXXXXSHLARDLNVSRDEASQILNTALQSNRFN 903
            ME   LPLSPS R KL+SAGYT          S LARD N++ +EA +IL  A QS    
Sbjct: 22   MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQS--CC 79

Query: 902  PNTNAIVAGAQTAWEMLHEEEFITRVTTSCKDLDNILGGGINCKEVTEIGGVPGIGKTQL 723
              + +++ GA+ AW+MLHEEE + R+TTSC DLDNILGGGI+C++VTEIGGVPGIGKTQ+
Sbjct: 80   NGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQI 139

Query: 722  GIQLAVNVQIPVECGGLGGKVIYIDTEGSFMVERVFQIAEACIEDLLESYDFQQKDFQTC 543
            GIQL+VNVQIP ECGGLGGK IYIDTEGSFMV+R  QIAEAC+ED+ E   +  K FQ  
Sbjct: 140  GIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVKRALQIAEACVEDMEEYTGYMHKHFQAN 199

Query: 542  KAKMQPKTFLSNIFYFRVCSYTEQIALINYLEKFLAENRDVKILIIDSVTFHFRQDFDDL 363
            + +M+P+  L NIFYFRVCSYTEQIAL+N+LEKF++EN+DVK++I+DS+TFHFRQD+DDL
Sbjct: 200  QVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYDDL 259

Query: 362  ALRTRVLSGIALKLMKLAKNFSLAVVLLNQVTTKFTEGSFQLTLALGDSWSHACTNRVIL 183
            A RTRVLS +ALK MKLAK FSLAVVLLNQVTTKF+EGSFQL LALGDSWSH+CTNRVIL
Sbjct: 260  AQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVIL 319

Query: 182  HWNGNERYAYIDKXXXXXXXXXXXAVTSKGIRDTASHCKRIRMM 51
            +WNG+ERYAYIDK            VTS+G+R+++S  KR++MM
Sbjct: 320  YWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 363