BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00013259
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   281   7e-74
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   252   4e-65
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   252   4e-65
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   252   6e-65
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     247   1e-63

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  281 bits (720), Expect = 7e-74
 Identities = 129/193 (66%), Positives = 160/193 (82%)
 Frame = -1

Query: 679  YPMKHKDEVLDIFLKWKTLVETRMDRKIKTLRSDNGGEYTSDPFKKVCAQYGILRHYTVR 500
            + MK+K++VL+IFLKWK  VE +  RKIK LR+DNGGEY SDPF KVC   GI+RH+T+R
Sbjct: 506  FTMKNKNDVLEIFLKWKDEVENQTGRKIKVLRTDNGGEYKSDPFLKVCQDCGIIRHFTIR 565

Query: 499  HTPQQNGVAERMNRTLLEKVRCMLSNSGLGKVFWAEAITYASHIINRLPSSALGGKTPME 320
             TPQQNGV+ERMN+ L+EKVRCMLSN+ LG+ FWAEA+TYA H++NRLPSSA+ GKTP+E
Sbjct: 566  KTPQQNGVSERMNKILVEKVRCMLSNAELGRKFWAEAVTYAQHLVNRLPSSAIDGKTPLE 625

Query: 319  VWRGAPISDYNRFHVFGCSAFYHVKENKLDPRARKAIFIGFEGGVKGYKLWDPELKKAIV 140
            VW G P +DY+  HVFG  A+YHV E+KLDPRA+KA+F+GF  GVKGY+LW  E KK I+
Sbjct: 626  VWSGKPATDYDSLHVFGSIAYYHVIESKLDPRAKKALFMGFSPGVKGYRLWCLEAKKTII 685

Query: 139  SRDVTFDETSMWK 101
            SRDVTFDE++M K
Sbjct: 686  SRDVTFDESAMLK 698


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  252 bits (644), Expect = 4e-65
 Identities = 120/228 (52%), Positives = 161/228 (70%)
 Frame = -1

Query: 700  YSRRVWVYPMKHKDEVLDIFLKWKTLVETRMDRKIKTLRSDNGGEYTSDPFKKVCAQYGI 521
            YSR+VW Y +KHK +  D+F +WKT+VE + +RK+K LR+DNG E+ S  FK  C   GI
Sbjct: 728  YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGI 787

Query: 520  LRHYTVRHTPQQNGVAERMNRTLLEKVRCMLSNSGLGKVFWAEAITYASHIINRLPSSAL 341
            +RHYTV HTPQQNGVAERMNRT++ K RC+LSN+GL K FWAEA++ A ++INR PS A+
Sbjct: 788  VRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAI 847

Query: 340  GGKTPMEVWRGAPISDYNRFHVFGCSAFYHVKENKLDPRARKAIFIGFEGGVKGYKLWDP 161
              KTP+EVW G+P ++Y+   VFGC+A+ HV   KL+PRA K IF+G+  GVKGYKLW P
Sbjct: 848  DKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCP 906

Query: 160  ELKKAIVSRDVTFDETSMWKGSTSSREVLQPVEITRVLTDAPLDNGGA 17
            E KK ++SR+V F E+ M     S+   ++  E   V  +  + +G A
Sbjct: 907  ETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHA 954


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
            gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
            Japonica Group]
          Length = 1601

 Score =  252 bits (644), Expect = 4e-65
 Identities = 120/228 (52%), Positives = 161/228 (70%)
 Frame = -1

Query: 700  YSRRVWVYPMKHKDEVLDIFLKWKTLVETRMDRKIKTLRSDNGGEYTSDPFKKVCAQYGI 521
            YSR+VW Y +KHK +  D+F +WKT+VE + +RK+K LR+DNG E+ S  FK  C   GI
Sbjct: 521  YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGI 580

Query: 520  LRHYTVRHTPQQNGVAERMNRTLLEKVRCMLSNSGLGKVFWAEAITYASHIINRLPSSAL 341
            +RHYTV HTPQQNGVAERMNRT++ K RC+LSN+GL K FWAEA++ A ++INR PS A+
Sbjct: 581  VRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAI 640

Query: 340  GGKTPMEVWRGAPISDYNRFHVFGCSAFYHVKENKLDPRARKAIFIGFEGGVKGYKLWDP 161
              KTP+EVW G+P ++Y+   VFGC+A+ HV   KL+PRA K IF+G+  GVKGYKLW P
Sbjct: 641  DKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCP 699

Query: 160  ELKKAIVSRDVTFDETSMWKGSTSSREVLQPVEITRVLTDAPLDNGGA 17
            E KK ++SR+V F E+ M     S+   ++  E   V  +  + +G A
Sbjct: 700  ETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHA 747


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
            gi|20087076|gb|AAM10749.1|AC112514_2 Putative
            retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  252 bits (643), Expect = 6e-65
 Identities = 122/234 (52%), Positives = 165/234 (70%), Gaps = 1/234 (0%)
 Frame = -1

Query: 700  YSRRVWVYPMKHKDEVLDIFLKWKTLVETRMDRKIKTLRSDNGGEYTSDPFKKVCAQYGI 521
            YSR+VW Y +KHK +  D+F +WKT+VE + +RK+K LR+DNG ++ S  FK  C   GI
Sbjct: 482  YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGI 541

Query: 520  LRHYTVRHTPQQNGVAERMNRTLLEKVRCMLSNSGLGKVFWAEAITYASHIINRLPSSAL 341
            +RHYTV HTPQQNGVAERMNRT++ K RCMLSN+GL K FWAEA++ A ++INR PS A+
Sbjct: 542  VRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAI 601

Query: 340  GGKTPMEVWRGAPISDYNRFHVFGCSAFYHVKENKLDPRARKAIFIGFEGGVKGYKLWDP 161
              KTP++VW G+P ++Y+   VFGC A+ HV  +KL+PRA K IF+G+  GVKGYKLW P
Sbjct: 602  DKKTPIKVWSGSP-ANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCP 660

Query: 160  ELKKAIVSRDVTFDETSMWKGSTSSREVLQPVEITRVLTDAPLDNGGA-NRENV 2
            E KK ++SR+V F E+ M     S+   ++  E   V  +  + +G A  +ENV
Sbjct: 661  ETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENV 714


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  247 bits (631), Expect = 1e-63
 Identities = 119/228 (52%), Positives = 158/228 (69%)
 Frame = -1

Query: 700  YSRRVWVYPMKHKDEVLDIFLKWKTLVETRMDRKIKTLRSDNGGEYTSDPFKKVCAQYGI 521
            YSR+VW Y +KHK +  D+F +WKT+VE + +RK+K LR+DNG E  S  FK  C   GI
Sbjct: 430  YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGI 489

Query: 520  LRHYTVRHTPQQNGVAERMNRTLLEKVRCMLSNSGLGKVFWAEAITYASHIINRLPSSAL 341
            +RHYTV HTPQQNGVAERMNRT++ K RCMLSN+ L K FWAEA++ A ++INR PS A+
Sbjct: 490  VRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAI 549

Query: 340  GGKTPMEVWRGAPISDYNRFHVFGCSAFYHVKENKLDPRARKAIFIGFEGGVKGYKLWDP 161
              KTP+EVW G+P ++Y+   VFGC+A+ HV   KL+PR  K IF+G+  GVKGYKLW P
Sbjct: 550  DKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCP 608

Query: 160  ELKKAIVSRDVTFDETSMWKGSTSSREVLQPVEITRVLTDAPLDNGGA 17
            E KK ++SR+V F E+ M     S+   ++  E   V  +  + +G A
Sbjct: 609  ETKKVVISRNVVFHESIMLHDKPSTNVPVESQEKVSVQVEHLISSGHA 656