BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00013251
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containi...   210   2e-52
ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containi...   184   1e-44
ref|XP_002330712.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40
ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
ref|NP_563765.1| pentatricopeptide repeat-containing protein [Ar...   164   1e-38

>ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270
           [Vitis vinifera] gi|302143379|emb|CBI21940.3| unnamed
           protein product [Vitis vinifera]
          Length = 343

 Score =  210 bits (534), Expect = 2e-52
 Identities = 114/214 (53%), Positives = 139/214 (64%), Gaps = 1/214 (0%)
 Frame = +3

Query: 3   HAKPQLRHISPFHTAPSSQTLQQSLESAIQTKSYHQIXXXXXXXXXXXXXXXXXXXXXXX 182
           H    LR IS  H+  SSQTL++S+++A+++K+Y +I                       
Sbjct: 14  HFHYSLRQISSIHSITSSQTLEESIKAAVESKTYQKIPDLLISLEETCLNPNPFSFLSTF 73

Query: 183 XXXXXXXTQTIDSILQSLIHVRPRSLPQTTYSLLLSHTLDSPNPFPLSLALLQRTLRSGC 362
                  TQ +D ILQS I +RPRS PQ  Y+ LLS TL S NP PL+LA+LQRTLRSGC
Sbjct: 74  SQNLR--TQVVDEILQSFIPLRPRSRPQIAYACLLSFTLQSANPLPLALAILQRTLRSGC 131

Query: 363 LPAKQTHLSLSSAWLLHR-QHHSVSGILSAMRSIGYRPDTGTCNYLLLSLSAVDRAEEAV 539
           +P  QTHL LSSAWL  R Q HSVS ILS M+SIGY PD GTCNYL+LSL A+D+  EAV
Sbjct: 132 IPVPQTHLLLSSAWLSRRRQSHSVSNILSEMQSIGYYPDCGTCNYLILSLCAIDQLVEAV 191

Query: 540 YVLNSMGEVGCEPDSESYGIVIGALCELRRIDEA 641
            VL SMG+VGC PD E YG VIGA+C +RR  +A
Sbjct: 192 IVLKSMGQVGCIPDLEGYGSVIGAMCAMRRTTDA 225


>ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Glycine max]
          Length = 342

 Score =  184 bits (467), Expect = 1e-44
 Identities = 104/213 (48%), Positives = 130/213 (61%), Gaps = 1/213 (0%)
 Frame = +3

Query: 9   KPQLRHISPFHTAPSSQTLQQSLESAIQTKSYHQIXXXXXXXXXXXXXXXXXXXXXXXXX 188
           +P L       +  S Q L+Q++ + ++ K+Y +I                         
Sbjct: 16  RPILNRCPLGRSVSSLQNLEQAVRAEVEAKNYIKIPELLISSDACQISNPFSFFSSFPQN 75

Query: 189 XXXXXTQTIDSILQSLIHVRPRSLPQTTYSLLLSHTLDSPNPFPLSLALLQRTLRSGCLP 368
                 Q +D +LQSLI +RPRS  Q TYS LLS+TL S +PFPL+LA+LQRTLRSGC+P
Sbjct: 76  IR---VQIVDEMLQSLIPIRPRSKAQLTYSYLLSYTLQSSHPFPLALAVLQRTLRSGCVP 132

Query: 369 AKQTHLSLSSAWL-LHRQHHSVSGILSAMRSIGYRPDTGTCNYLLLSLSAVDRAEEAVYV 545
             QTH+ LSSAWL  H   HSV+ IL  M+SIGY PD GTCNYLL SL AVD+ EEAV V
Sbjct: 133 VPQTHVLLSSAWLDQHCLSHSVANILLQMQSIGYHPDCGTCNYLLSSLCAVDQLEEAVKV 192

Query: 546 LNSMGEVGCEPDSESYGIVIGALCELRRIDEAL 644
           L  MG  GC PDS SYG VIGA+C +R+  +AL
Sbjct: 193 LRGMGGAGCIPDSSSYGAVIGAMCRVRKTAKAL 225


>ref|XP_002330712.1| predicted protein [Populus trichocarpa] gi|222872316|gb|EEF09447.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  171 bits (433), Expect = 1e-40
 Identities = 100/213 (46%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
 Frame = +3

Query: 12  PQLRHISPFHTAPSSQT-LQQSLESAIQTKSYHQIXXXXXXXXXXXXXXXXXXXXXXXXX 188
           P  + +  F T  +S T L+++L++A++ KSY +                          
Sbjct: 14  PYSKILLQFRTLSTSHTPLEETLKAAVECKSYSKFPDLFDSFKQSNNNPSPFSFLSTFPF 73

Query: 189 XXXXXTQTIDSILQSLIHVRPRSLPQTTYSLLLSHTLDSPNPFPLSLALLQRTLRSGCLP 368
                TQ ID I+QSLI +RPR      YS LLS+TL + N F LSLA++Q TLRSGCLP
Sbjct: 74  NLR--TQVIDEIIQSLIPIRPRFRNFIVYSSLLSYTLQNSNLFSLSLAIIQCTLRSGCLP 131

Query: 369 AKQTHLSLSSAWL-LHRQHHSVSGILSAMRSIGYRPDTGTCNYLLLSLSAVDRAEEAVYV 545
             QTH+SLSSAWL   R+  SV  IL  M+SIGY PD G CNY++LSL  VD+  EAV V
Sbjct: 132 VPQTHVSLSSAWLDRRREGQSVGDILMEMKSIGYNPDCGLCNYIVLSLCNVDQLIEAVKV 191

Query: 546 LNSMGEVGCEPDSESYGIVIGALCELRRIDEAL 644
           L  M +VGC PD ESYGIVIGA+C +R+ D+A+
Sbjct: 192 LKGMKQVGCFPDWESYGIVIGAMCRVRKCDDAI 224


>ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Cucumis sativus]
           gi|449483078|ref|XP_004156487.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g06270-like [Cucumis sativus]
          Length = 343

 Score =  167 bits (424), Expect = 1e-39
 Identities = 95/210 (45%), Positives = 123/210 (58%), Gaps = 1/210 (0%)
 Frame = +3

Query: 18  LRHISPFHTAPSSQTLQQSLESAIQTKSYHQIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 197
           L   S  H+   SQTLQ S+++A+++KSY ++                            
Sbjct: 19  LGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPLNLR 78

Query: 198 XXTQTIDSILQSLIHVRPRSLPQTTYSLLLSHTLDSPNPFPLSLALLQRTLRSGCLPAKQ 377
             TQ +D ILQSLI +RPRS  Q  +  LL +TL SP+PFPLSL +LQR L SGC+P+ Q
Sbjct: 79  --TQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQ 136

Query: 378 THLSLSSAWLLHR-QHHSVSGILSAMRSIGYRPDTGTCNYLLLSLSAVDRAEEAVYVLNS 554
           TH  LSSAWL  R Q  SV+ IL  M+SIGY+PD+  CNYL+ SL ++    EA  VL  
Sbjct: 137 THFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKG 196

Query: 555 MGEVGCEPDSESYGIVIGALCELRRIDEAL 644
           MG  GC PD ESYG +I A   +RR D+A+
Sbjct: 197 MGGAGCIPDLESYGTLIHAATAVRRTDKAV 226


>ref|NP_563765.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75264068|sp|Q9LNC0.1|PPR16_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g06270 gi|8844132|gb|AAF80224.1|AC025290_13 Contains
           similarity to an unknown protein F23N19.4 gi|6630464
           from Arabidopsis thaliana gb|AC007190 and contains
           multiple PPR PF|01535 repeats. EST gb|T44174 comes from
           this gene [Arabidopsis thaliana]
           gi|17529194|gb|AAL38823.1| unknown protein [Arabidopsis
           thaliana] gi|20465473|gb|AAM20196.1| unknown protein
           [Arabidopsis thaliana] gi|21536601|gb|AAM60933.1|
           unknown [Arabidopsis thaliana]
           gi|332189849|gb|AEE27970.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 343

 Score =  164 bits (416), Expect = 1e-38
 Identities = 90/204 (44%), Positives = 122/204 (59%), Gaps = 1/204 (0%)
 Frame = +3

Query: 36  FHTAPSSQTLQQSLESAIQTKSYHQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQTI 215
           F +  S + ++++++ A++TK Y +I                               + I
Sbjct: 25  FRSISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTLFSFLSAFQRHHRI--RVI 82

Query: 216 DSILQSLIHVRPRSLPQTTYSLLLSHTLDSPNPFPLSLALLQRTLRSGCLPAKQTHLSLS 395
           D ILQS + VRPRSLP+  YS LL++ L S +P PLS A+LQRTLRSGCLP  QTHL LS
Sbjct: 83  DEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLS 142

Query: 396 SAWLLHRQ-HHSVSGILSAMRSIGYRPDTGTCNYLLLSLSAVDRAEEAVYVLNSMGEVGC 572
            AWL  R+   SV+ I++ M+ IGY PDTGTCNYL+ SL AVD+ +EA+ V+  M   GC
Sbjct: 143 DAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGC 202

Query: 573 EPDSESYGIVIGALCELRRIDEAL 644
            PD ESYG VI +LC  R+  + +
Sbjct: 203 IPDVESYGAVINSLCLARKTTDVV 226