BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00013236
         (1960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   244   6e-62
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   243   1e-61
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218...   242   2e-61
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   242   2e-61
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              240   1e-60

>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  244 bits (623), Expect = 6e-62
 Identities = 160/463 (34%), Positives = 231/463 (49%), Gaps = 90/463 (19%)
 Frame = +3

Query: 9    SDANAWVGTASAWNATKSQNLHS---KEPADSWGIQTKE--SDTNAWGAIADKPSEGG-- 167
            S +  W   A +   +K+++  S   K+ A+S+ +Q +E  S TN WG+        G  
Sbjct: 1525 SKSGGWEDKAWSRGTSKTEDNWSSQVKDKAESFQVQVQEVSSKTNGWGSTGGWTKNSGGD 1584

Query: 168  --SEAGWTTLESQVLPSKGPVDSWGNQTRQS----GTNAWDNSPRGQQNENFSKKPSESL 329
              SEAGW   ++ +   K   D W  +  Q      T++W +   G   ++F  K  +  
Sbjct: 1585 HQSEAGWNDGQASMDREKVS-DRWDRKATQKLESHQTSSWGSPTVGDSKDSFPSKAVDHS 1643

Query: 330  ESAGWNAIESQKKPP------------QKSSD--------------GWGNKNEVQCGQ-- 425
            +S   ++ + QK P             QKS D              GWG++ E   G   
Sbjct: 1644 DSVVNHSWDRQKSPEASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSDH 1703

Query: 426  ------SEKPSVDTPRFGGWNSLESQETSLDDP----CDSTWG----------------- 524
                  +E+ S DT    GW+S E  +   D         +WG                 
Sbjct: 1704 GFDQVTNEQKSSDTR---GWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASE 1760

Query: 525  ---KKVEETKSSSWSQMKQVNLSQDDQDRNLP-----WGRGK------------KQXXXX 644
               ++ ++  S+ +SQ+K    S   + +  P     WG  K            K+    
Sbjct: 1761 ECSRESQDDSSTQFSQLKPPETSLGWEQQKSPEVSHGWGSNKESSEQTSSHGWDKKNQGS 1820

Query: 645  XXXXXXXXDWKQR-NRPANLPGKF-DERNSRGGFTPGRSRLDQYTPEEQQIHSEVEPIIQ 818
                    +WK R NRP   PG   D+ N R  +T    RLD +T EEQ I +++EPI+Q
Sbjct: 1821 KGWGGNAGEWKNRKNRPPKSPGMSNDDANLRALYTASGQRLDMFTSEEQDILADIEPIMQ 1880

Query: 819  SLKRIMHLSGYNDGDPLSADDQSYILDNVFKYHPDKASKTGLGVDHVMISKHSSFQETRC 998
            S++++MH SGYNDGDPLSA+DQS++L +VF +HPDKA+K G G+DH M+S+HSSFQE+RC
Sbjct: 1881 SIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRC 1940

Query: 999  LYIVSTDGRKEDFSYRKCMENFVKEKYPELAESFVGKYFRKPR 1127
             Y+V+TDG KEDFSYRKC++NF+K KYP+LAE FV KYFRKPR
Sbjct: 1941 FYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKPR 1983


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  243 bits (621), Expect = 1e-61
 Identities = 160/463 (34%), Positives = 231/463 (49%), Gaps = 90/463 (19%)
 Frame = +3

Query: 9    SDANAWVGTASAWNATKSQNLHS---KEPADSWGIQTKE--SDTNAWGAIADKPSEGG-- 167
            S +  W   A +   +K+++  S   K+ A+S+ +Q +E  S TN WG+        G  
Sbjct: 1465 SKSGGWEDKAWSRGTSKTEDNWSSQVKDKAESFQVQVQEVSSKTNGWGSTGGWTKNSGGD 1524

Query: 168  --SEAGWTTLESQVLPSKGPVDSWGNQTRQS----GTNAWDNSPRGQQNENFSKKPSESL 329
              SEAGW   ++ +   K   D W  +  Q      T++W +   G   ++F  K  +  
Sbjct: 1525 HQSEAGWNDGQASMDREKVS-DRWDRKATQKLESHQTSSWGSPTVGDSKDSFPSKAVDHS 1583

Query: 330  ESAGWNAIESQKKPP------------QKSSD--------------GWGNKNEVQCGQ-- 425
            +S   ++ + QK P             QKS D              GWG++ E   G   
Sbjct: 1584 DSVVNHSWDRQKSPEASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSDH 1643

Query: 426  ------SEKPSVDTPRFGGWNSLESQETSLDDP----CDSTWG----------------- 524
                  +E+ S DT    GW+S E  +   D         +WG                 
Sbjct: 1644 GFDQVTNEQKSSDTR---GWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASE 1700

Query: 525  ---KKVEETKSSSWSQMKQVNLSQDDQDRNLP-----WGRGK------------KQXXXX 644
               ++ ++  S+ +SQ+K    S   + +  P     WG  K            K+    
Sbjct: 1701 ECSRESQDDSSTQFSQLKPPETSLGWEQQKSPEVSHGWGSHKESSEQTSSHGWDKKNQGS 1760

Query: 645  XXXXXXXXDWKQR-NRPANLPGKF-DERNSRGGFTPGRSRLDQYTPEEQQIHSEVEPIIQ 818
                    +WK R NRP   PG   D+ N R  +T    RLD +T EEQ I +++EPI+Q
Sbjct: 1761 KGWGGNAGEWKNRKNRPPKSPGMSNDDANLRALYTASGQRLDMFTSEEQDILADIEPIMQ 1820

Query: 819  SLKRIMHLSGYNDGDPLSADDQSYILDNVFKYHPDKASKTGLGVDHVMISKHSSFQETRC 998
            S++++MH SGYNDGDPLSA+DQS++L +VF +HPDKA+K G G+DH M+S+HSSFQE+RC
Sbjct: 1821 SIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRC 1880

Query: 999  LYIVSTDGRKEDFSYRKCMENFVKEKYPELAESFVGKYFRKPR 1127
             Y+V+TDG KEDFSYRKC++NF+K KYP+LAE FV KYFRKPR
Sbjct: 1881 FYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKPR 1923


>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1| Protein
            DCL [Medicago truncatula]
          Length = 481

 Score =  242 bits (618), Expect = 2e-61
 Identities = 145/402 (36%), Positives = 207/402 (51%), Gaps = 34/402 (8%)
 Frame = +3

Query: 30   GTASAWNATKSQNLHSKEPA---DSWGIQT---------KESD-TNAWGAIADKPSEGGS 170
            G   AW ++K + +H  E     DSW  Q          K+S  ++AWGA   K ++  S
Sbjct: 38   GGWKAWGSSKPE-VHEGESTKVQDSWNSQKWKAAEDVSQKDSQKSSAWGATKPKSNDNRS 96

Query: 171  EAGWTTLESQVLPSKGPVDSWGNQTRQSGTNAWDNSPRGQQNENFSKKP--------SES 326
              G    E  V+P              S +NAW+  P   ++   +K P        ++S
Sbjct: 97   SWGQKKDEIHVMPEDS-----------SRSNAWEQKPENVKDSWVAKVPVANSSWGKAKS 145

Query: 327  LESAGWNAIESQK----KPPQKSSDGWGNKNEVQCGQSEKPSVDTPRFGGWNSLESQETS 494
             E+  W++         KP  + ++ W +KNE      +  S ++  +   N   S    
Sbjct: 146  PENRPWDSKNEPNNSFGKPNSQENEPWDSKNESDSSWGKPKSQESQPWDSKNESNSSWGK 205

Query: 495  LDDPCDSTWGKKVEETK---SSSWSQMKQVNLSQDDQDRNLPWGRG------KKQXXXXX 647
                 +  W  K E  +   S  W    QV  +  + D++  WG+       K +     
Sbjct: 206  PKSQENHPWDSKNESNQTAGSRGWDS--QVASANSESDKSFQWGKQGRDSFKKNRFEGSQ 263

Query: 648  XXXXXXXDWKQRNRPANLPGKFDERNSRGGFTPGRSRLDQYTPEEQQIHSEVEPIIQSLK 827
                   DWK R+RP   PG+               R + YTPEEQ I  ++EPI+QS++
Sbjct: 264  SGGPNAGDWKNRSRPVRPPGQ---------------RFELYTPEEQDIMKDIEPIVQSIR 308

Query: 828  RIMHLSGYNDGDPLSADDQSYILDNVFKYHPDKASKTGLGVDHVMISKHSSFQETRCLYI 1007
            RIM L GYNDGDPL+ +DQ Y+L+NVF++HPDK +K G+GVDHVM+SKHS+FQ++RCLY+
Sbjct: 309  RIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYV 368

Query: 1008 VSTDGRKEDFSYRKCMENFVKEKYPELAESFVGKYFRKPRGR 1133
            V  DG+KEDFSYRKC+EN V++KYPE AESF GKYFRKP+ R
Sbjct: 369  VLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPR 410


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  242 bits (618), Expect = 2e-61
 Identities = 145/402 (36%), Positives = 207/402 (51%), Gaps = 34/402 (8%)
 Frame = +3

Query: 30   GTASAWNATKSQNLHSKEPA---DSWGIQT---------KESD-TNAWGAIADKPSEGGS 170
            G   AW ++K + +H  E     DSW  Q          K+S  ++AWGA   K ++  S
Sbjct: 1589 GGWKAWGSSKPE-VHEGESTKVQDSWNSQKWKAGEDVSQKDSQKSSAWGATKPKSNDNRS 1647

Query: 171  EAGWTTLESQVLPSKGPVDSWGNQTRQSGTNAWDNSPRGQQNENFSKKP--------SES 326
              G    E  V+P              S +NAW+  P   ++   +K P        ++S
Sbjct: 1648 SWGQKKDEIHVMPEDS-----------SRSNAWEQKPENVKDSWVAKVPVANSSWGKAKS 1696

Query: 327  LESAGWNAIESQK----KPPQKSSDGWGNKNEVQCGQSEKPSVDTPRFGGWNSLESQETS 494
             E+  W++         KP  + ++ W +KNE      +  S ++  +   N   S    
Sbjct: 1697 PENRPWDSKNEPNNSFGKPNSQENEPWDSKNESDSSWGKPKSQESQPWDSKNESNSSWGK 1756

Query: 495  LDDPCDSTWGKKVEETK---SSSWSQMKQVNLSQDDQDRNLPWGRG------KKQXXXXX 647
                 +  W  K E  +   S  W    QV  +  + D++  WG+       K +     
Sbjct: 1757 PKSQENHPWDSKNESNQTAGSRGWDS--QVASANSESDKSFQWGKQGRDSFKKNRFEGSQ 1814

Query: 648  XXXXXXXDWKQRNRPANLPGKFDERNSRGGFTPGRSRLDQYTPEEQQIHSEVEPIIQSLK 827
                   DWK R+RP   PG+               R + YTPEEQ I  ++EPI+QS++
Sbjct: 1815 SGGPNAGDWKNRSRPVRPPGQ---------------RFELYTPEEQDIMKDIEPIVQSIR 1859

Query: 828  RIMHLSGYNDGDPLSADDQSYILDNVFKYHPDKASKTGLGVDHVMISKHSSFQETRCLYI 1007
            RIM L GYNDGDPL+ +DQ Y+L+NVF++HPDK +K G+GVDHVM+SKHS+FQ++RCLY+
Sbjct: 1860 RIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYV 1919

Query: 1008 VSTDGRKEDFSYRKCMENFVKEKYPELAESFVGKYFRKPRGR 1133
            V  DG+KEDFSYRKC+EN V++KYPE AESF GKYFRKP+ R
Sbjct: 1920 VLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPR 1961


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  240 bits (612), Expect = 1e-60
 Identities = 163/446 (36%), Positives = 218/446 (48%), Gaps = 67/446 (15%)
 Frame = +3

Query: 6    ESDANAWVGTASAWNATKSQNL-----HSKEPADS-----------------WGIQTKES 119
            ES  +A       W   K+QN      H   P  S                 WG +  E+
Sbjct: 1421 ESSRSAGWDDKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWGKKIDEA 1480

Query: 120  DTNAWGAIADKPSEGGSEAGW-----TTLESQVLPSKGPVDS----WGNQTRQSGTNAWD 272
            D   W     KP        +        E     + G + S    W     Q      D
Sbjct: 1481 DKTGWNKNDGKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTGDWKKNELQMEVVQHD 1540

Query: 273  NSPRGQQN--ENFSKKP-SESLESAGWNAI--------------ESQKKPPQKSSDGWGN 401
             SP  + +   N  + P +++  S GW++               E Q+ P  KS   W +
Sbjct: 1541 ESPVNEHSWDANLPEDPLAQATTSVGWDSSTGKDWTKRKLQSPSEQQRDPAIKS---WSS 1597

Query: 402  KNEVQCGQSEKPSV----DTPRFGGWNSLESQE-------TSLDDPCDST--WGKKVEET 542
             + V   QS +P+     D+P   GWN +E Q           +D  +S+  WG   E+ 
Sbjct: 1598 SHNVMKEQSNQPASTHGWDSPGAKGWNDVEEQSQWNQRGSAVKNDQSESSHGWGPSNEQN 1657

Query: 543  KSSSWSQMKQVNLSQD-DQDRNLPWGR--GKK-QXXXXXXXXXXXXDWK-QRNRPANLPG 707
            +  S       N     + +    WG+  GKK +            +WK ++NRP    G
Sbjct: 1658 QLPSSQGWGSPNAGAGHESETQSQWGQPSGKKSRPEGSRGWGSNNTEWKNKKNRPNKPQG 1717

Query: 708  KFDERNSRGG-FTPGRSRLDQYTPEEQQIHSEVEPIIQSLKRIMHLSGYNDGDPLSADDQ 884
              ++  S GG FT  R R+D +T EEQ I  +VEPI+QS++RIMH +GYNDGDPLSADDQ
Sbjct: 1718 PLNDDYSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQ 1777

Query: 885  SYILDNVFKYHPDKASKTGLGVDHVMISKHSSFQETRCLYIVSTDGRKEDFSYRKCMENF 1064
            SYILD VF  HPDKA K G G+D+VM+S+HSSF E+RC Y+VSTDG KEDFSYRKC+ENF
Sbjct: 1778 SYILDKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENF 1837

Query: 1065 VKEKYPELAESFVGKYFRKPRGRGGN 1142
            +KEKYP+ AE+F+GKYFR+PR  GGN
Sbjct: 1838 IKEKYPDNAETFIGKYFRRPRA-GGN 1862