BLASTX nr result

ID: Aconitum21_contig00013103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00013103
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]              103   5e-20
ref|XP_002316220.1| high mobility group family [Populus trichoca...   103   5e-20
ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 i...   101   2e-19
ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 i...   101   2e-19
ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-l...    98   2e-18

>gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]
          Length = 165

 Score =  103 bits (257), Expect = 5e-20
 Identities = 60/109 (55%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
 Frame = -1

Query: 798 PVDDKV-GKRKAVSKAPKSNXXXXXXXXXXXXXXXXXXXXPSAFFVFLEEFRKTYKLEHP 622
           PV+D+  GKRKAV KA +S+                    PSAFFVFLEEFRK YK EHP
Sbjct: 20  PVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHP 79

Query: 621 NNKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXKVEYEKLMTTYNKKQ 475
           N KAVSAVGKAGGEKWKSL+              K++YEKLMT YNKKQ
Sbjct: 80  NVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128


>ref|XP_002316220.1| high mobility group family [Populus trichocarpa]
           gi|222865260|gb|EEF02391.1| high mobility group family
           [Populus trichocarpa]
          Length = 176

 Score =  103 bits (257), Expect = 5e-20
 Identities = 61/109 (55%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = -1

Query: 798 PVDD-KVGKRKAVSKAPKSNXXXXXXXXXXXXXXXXXXXXPSAFFVFLEEFRKTYKLEHP 622
           PV+D K+GKRKA  KA +S+                    PSAFFVFLEEFRK YK EHP
Sbjct: 20  PVEDRKIGKRKAALKANESSKKRVKKEKITKKDPNKPKRPPSAFFVFLEEFRKVYKQEHP 79

Query: 621 NNKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXKVEYEKLMTTYNKKQ 475
           N KAVSAVGKAGGEKWKSLS              K +YEKLMT YNKKQ
Sbjct: 80  NVKAVSAVGKAGGEKWKSLSAAEKAPYEAKAAKRKSDYEKLMTAYNKKQ 128


>ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 isoform 2 [Vitis
           vinifera]
          Length = 156

 Score =  101 bits (251), Expect = 2e-19
 Identities = 60/109 (55%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
 Frame = -1

Query: 798 PVDDK-VGKRKAVSKAPKSNXXXXXXXXXXXXXXXXXXXXPSAFFVFLEEFRKTYKLEHP 622
           PV+D+ +GKRKA  KA KS                     PSAFFVFLEEFRK YK EHP
Sbjct: 20  PVEDRRLGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHP 79

Query: 621 NNKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXKVEYEKLMTTYNKKQ 475
           N KAVSAVGKAGGEKWKSLS              K +YEKLM  YNKKQ
Sbjct: 80  NVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEKLMAAYNKKQ 128


>ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 isoform 1 [Vitis
           vinifera] gi|147854340|emb|CAN83423.1| hypothetical
           protein VITISV_023376 [Vitis vinifera]
          Length = 166

 Score =  101 bits (251), Expect = 2e-19
 Identities = 60/109 (55%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
 Frame = -1

Query: 798 PVDDK-VGKRKAVSKAPKSNXXXXXXXXXXXXXXXXXXXXPSAFFVFLEEFRKTYKLEHP 622
           PV+D+ +GKRKA  KA KS                     PSAFFVFLEEFRK YK EHP
Sbjct: 20  PVEDRRLGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHP 79

Query: 621 NNKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXKVEYEKLMTTYNKKQ 475
           N KAVSAVGKAGGEKWKSLS              K +YEKLM  YNKKQ
Sbjct: 80  NVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEKLMAAYNKKQ 128


>ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
           gi|147815135|emb|CAN74566.1| hypothetical protein
           VITISV_023651 [Vitis vinifera]
           gi|297740214|emb|CBI30396.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 56/106 (52%), Positives = 62/106 (58%)
 Frame = -1

Query: 792 DDKVGKRKAVSKAPKSNXXXXXXXXXXXXXXXXXXXXPSAFFVFLEEFRKTYKLEHPNNK 613
           D K+GKRKA  KA KS+                    PSAFFVFLEEFRK +K E+PN K
Sbjct: 23  DRKIGKRKAAVKAEKSSKRATTKDKKAKKDPNKPKRPPSAFFVFLEEFRKVFKKENPNVK 82

Query: 612 AVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXKVEYEKLMTTYNKKQ 475
           AVSAVGKAGGE+WKSLS              K EYEK+M  YNKKQ
Sbjct: 83  AVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEKIMNAYNKKQ 128


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