BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00013035
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...    71   1e-10
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...    56   3e-06
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...    55   8e-06

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/73 (52%), Positives = 49/73 (67%)
 Frame = +3

Query: 6    DDTNQINEEGHNGEENPQDLLAAAGLXXXXXXXXXXXGPSSALNRRRRAWSESDEDEPSD 185
            + TNQ+N +  +GE++ QDLLAAAGL           GPSS  NRR+RAWSESDEDEP D
Sbjct: 995  ESTNQMNNQDDDGEDDAQDLLAAAGLEDSDAEDDMA-GPSSG-NRRKRAWSESDEDEPQD 1052

Query: 186  GKLDSGPNKDNVA 224
             + +S P ++N A
Sbjct: 1053 QRPESSPVRENSA 1065


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/74 (48%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
 Frame = +3

Query: 3    EDDTN--------QINEEGHNGEENPQDLLAAAGLXXXXXXXXXXXGPSSALNRRRRAWS 158
            +DD N        Q+N++  N EEN QD+LAAAGL            PSSA  RR+RAWS
Sbjct: 984  DDDANVNFREPGYQMNDQDDNAEENAQDVLAAAGL-EDSDADDDAAAPSSA-GRRKRAWS 1041

Query: 159  ESDEDEPSDGKLDS 200
            ESDEDE S+ K  S
Sbjct: 1042 ESDEDEISERKPQS 1055


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
            gi|223544778|gb|EEF46294.1| tpr repeat nuclear
            phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/70 (48%), Positives = 41/70 (58%)
 Frame = +3

Query: 15   NQINEEGHNGEENPQDLLAAAGLXXXXXXXXXXXGPSSALNRRRRAWSESDEDEPSDGKL 194
            N+++ +  + EEN QDLLAAAGL            PSS   RRRRA SESD+DE  D KL
Sbjct: 974  NRLDNQDEDAEENAQDLLAAAGLEDSDAEDA---APSSTA-RRRRALSESDDDEVLDSKL 1029

Query: 195  DSGPNKDNVA 224
             S P + N A
Sbjct: 1030 QSSPVRGNSA 1039