BLASTX nr result

ID: Aconitum21_contig00012484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012484
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520925.1| Photosystem II stability/assembly factor HCF...   278   1e-72
ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly...   277   2e-72
ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|2...   272   6e-71
ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...   272   8e-71
ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly...   270   4e-70

>ref|XP_002520925.1| Photosystem II stability/assembly factor HCF136, chloroplast
           precursor, putative [Ricinus communis]
           gi|223539891|gb|EEF41470.1| Photosystem II
           stability/assembly factor HCF136, chloroplast precursor,
           putative [Ricinus communis]
          Length = 397

 Score =  278 bits (711), Expect = 1e-72
 Identities = 133/155 (85%), Positives = 139/155 (89%)
 Frame = +2

Query: 2   FNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXXXXXX 181
           FNTVNRSPDGNYVAVSSRGNFYLTWEPGQP+WQPHNRAVARRIQNMGWRAD         
Sbjct: 243 FNTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRG 302

Query: 182 XXXXXSKGTGITEEFEEVPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWSRD 361
                SKGTGI+E+FEE+ VQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTW+RD
Sbjct: 303 GGLYLSKGTGISEDFEEISVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWTRD 362

Query: 362 KAADEIAANLYSVKFINDTKGFVLGNDGVLLRYLG 466
           KAAD IAANLYSVKFIND+KGFVLGNDGVLLRYLG
Sbjct: 363 KAADSIAANLYSVKFINDSKGFVLGNDGVLLRYLG 397


>ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Vitis vinifera]
           gi|297737938|emb|CBI27139.3| unnamed protein product
           [Vitis vinifera]
          Length = 404

 Score =  277 bits (708), Expect = 2e-72
 Identities = 131/155 (84%), Positives = 140/155 (90%)
 Frame = +2

Query: 2   FNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXXXXXX 181
           FNTVNRSPDG+YVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRAD         
Sbjct: 250 FNTVNRSPDGSYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRG 309

Query: 182 XXXXXSKGTGITEEFEEVPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWSRD 361
                SKGTGI+E+FEE+PVQSRGFGILDVGYRSK+EAWAAGGSG+LLRTTNGGKTW+RD
Sbjct: 310 GGLYLSKGTGISEDFEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVLLRTTNGGKTWTRD 369

Query: 362 KAADEIAANLYSVKFINDTKGFVLGNDGVLLRYLG 466
           KAAD IAANLYSVKFI+DTKGFVLGNDGVLLR+LG
Sbjct: 370 KAADNIAANLYSVKFIDDTKGFVLGNDGVLLRFLG 404


>ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|222853557|gb|EEE91104.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  272 bits (696), Expect = 6e-71
 Identities = 129/155 (83%), Positives = 138/155 (89%)
 Frame = +2

Query: 2   FNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXXXXXX 181
           FNTVNRSP+GNYVAVSSRGNFYLTWEPGQ +WQPHNRA+ARRIQNMGWRAD         
Sbjct: 240 FNTVNRSPNGNYVAVSSRGNFYLTWEPGQAFWQPHNRAIARRIQNMGWRADGGLWLLVRG 299

Query: 182 XXXXXSKGTGITEEFEEVPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWSRD 361
                SKGTGI+EEFEE+PVQSRGFGILDVGYRSK+EAWAAGGSG+LLRTTNGGKTW+RD
Sbjct: 300 GGLYLSKGTGISEEFEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVLLRTTNGGKTWTRD 359

Query: 362 KAADEIAANLYSVKFINDTKGFVLGNDGVLLRYLG 466
           KAAD IAANLYSVKFI+D KGFVLGNDGVLLRYLG
Sbjct: 360 KAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 394


>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic-like [Cucumis sativus]
           gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
           II stability/assembly factor HCF136, chloroplastic-like
           [Cucumis sativus]
          Length = 406

 Score =  272 bits (695), Expect = 8e-71
 Identities = 128/155 (82%), Positives = 138/155 (89%)
 Frame = +2

Query: 2   FNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXXXXXX 181
           FNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRA+ARRIQNMGWRAD         
Sbjct: 252 FNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRG 311

Query: 182 XXXXXSKGTGITEEFEEVPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWSRD 361
                SKGTGI+EEFEEVPVQSRGFGILDVGYRSK+EAWAAGGSG+LL+TTNGG++W+RD
Sbjct: 312 GGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGRSWTRD 371

Query: 362 KAADEIAANLYSVKFINDTKGFVLGNDGVLLRYLG 466
           KAAD IAANLYSVKFIND KGFVLGNDGVLL+YLG
Sbjct: 372 KAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406


>ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic-like [Glycine max]
          Length = 393

 Score =  270 bits (689), Expect = 4e-70
 Identities = 130/155 (83%), Positives = 135/155 (87%)
 Frame = +2

Query: 2   FNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXXXXXX 181
           FNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRAVARRIQNMGWRAD         
Sbjct: 239 FNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRG 298

Query: 182 XXXXXSKGTGITEEFEEVPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWSRD 361
                SKG G+TEEFEEVPVQSRGFGILDVGYRS DEAWAAGGSGILLRTTNGGK+W RD
Sbjct: 299 GGLYLSKGKGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGGKSWIRD 358

Query: 362 KAADEIAANLYSVKFINDTKGFVLGNDGVLLRYLG 466
           KAAD IAANLYSVKFI++ KGFVLGNDGVLLRYLG
Sbjct: 359 KAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393


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