BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012400
         (2111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...   660   0.0  
ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]     619   e-174
emb|CBI29966.3| unnamed protein product [Vitis vinifera]              619   e-174
ref|XP_002531584.1| programmed cell death protein, putative [Ric...   580   e-163
ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Ar...   572   e-160

>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score =  660 bits (1702), Expect = 0.0
 Identities = 342/647 (52%), Positives = 445/647 (68%), Gaps = 15/647 (2%)
 Frame = +1

Query: 160  FLILSLPEFNHAIGYASTADYNTQKLPHRHFVNGQSVVANIGALPGPSTAGRXXXXXXXX 339
            +L+LSLPE+N+AIGYAS +DYNTQK   + F++GQSV+A++ ALP PST GR        
Sbjct: 952  YLVLSLPEYNYAIGYASVSDYNTQKFAQKQFLHGQSVIASVMALPSPSTVGRLLLVLKSV 1011

Query: 340  XEVXXXXXXXXXXXXXXYTVGSLVEAEITDIKPLEMRLKFGFGFQGRLHITEANDDDNID 519
             E               Y VGSLV+AEIT+IKPLE+RLKFG GF GR+HITE  D++ I+
Sbjct: 1012 SEATETSSSKRAKKKSSYNVGSLVQAEITEIKPLELRLKFGIGFHGRVHITEVCDENVIE 1071

Query: 520  EPFQRFRIGQMVTARIVEKLDQSKKNRKQCQWDLSIKSAALSGSGETKQGLAVEEITFSS 699
             PF  FRIGQ V+ARIV K ++S+ N K  QW+LSIK   L+GS E +  L   E   S+
Sbjct: 1072 NPFSNFRIGQTVSARIVAKANKSENNGKNHQWELSIKPEMLTGSIEVENKLVDAEFRIST 1131

Query: 700  GKSVCGYVVAVDNEWVWLTVSRHVKAQLFLLDSSCEPSELRDFKNRFIVGKSVTGHIINF 879
            G+ V GYV  V+NEW+WLT+SRH+KAQLFLLD+SCEP+EL++F+ RF VGK+V+G++++ 
Sbjct: 1132 GQRVTGYVYKVENEWIWLTISRHIKAQLFLLDTSCEPNELQEFQKRFEVGKAVSGYVLSA 1191

Query: 880  NKEKRIVRLFLRPLS----TVSNEVGNVGEH-----------HIHEGDVIGGRITKILPG 1014
            NKEK+++R+ L   S    T+  +V N+              HIH+GD +GGRI+KILPG
Sbjct: 1192 NKEKKLLRMVLHQFSVSNGTLDGKVLNIDNQHCNPPIENLIPHIHKGDTLGGRISKILPG 1251

Query: 1015 IGGLVVQIGPHLYGKVHFTELANDWVANPLSGYDEGQFVKCKVLEISRSDNGNVHFDLSL 1194
            +GGL+VQIGPHLYGKVHFTEL + WV++PLSGY EGQFVKCKVLEI  S+ G VH DLSL
Sbjct: 1252 VGGLLVQIGPHLYGKVHFTELKDSWVSDPLSGYHEGQFVKCKVLEIGHSEKGTVHVDLSL 1311

Query: 1195 RDNKEGTQLSMAGNFQAQRIEKIEELQKDMIVQGYVKNVMSKGCFLTLSRKVDAKVLLSN 1374
              +  G       +    R+EKI+ L  DM+VQGYVKNV SKGCF+ LSRK+DA++LL+N
Sbjct: 1312 WSSLNGM------HSPNSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLSRKLDARILLAN 1365

Query: 1375 LSNGFIESPEKDFPVGKLIQGKVLSVEPMSKRVEVTLKMDSTGDAPLFDRKDFSSLHVGD 1554
            LS+G++E PE++FP+GKL+ G+VLSVEP+S+RVEVTLK  S       +  DFSS+ VGD
Sbjct: 1366 LSDGYVEKPEREFPIGKLVSGRVLSVEPLSRRVEVTLKTSSATSVQKSEVNDFSSILVGD 1425

Query: 1555 IISGRIKRIESFGLFVTIEHTNMVGLCHVSELSESDYPVENIESKFRVGERVVAKILKLD 1734
            II G IKR+ES+GLF+TI+ TNMVGLCH+SEL  SD  + NIE+K++ GERV AKILK+D
Sbjct: 1426 IIFGTIKRVESYGLFITIDDTNMVGLCHISEL--SDDHISNIETKYKAGERVAAKILKVD 1483

Query: 1735 EERRRISLGMKESYVTNDSTGSELLDQSTVGPIADNGVIDDHQIAGLQARNMFSAEDAEH 1914
            EER RISLGMK SY+   +               +NG +DD Q++     N    ++ + 
Sbjct: 1484 EERHRISLGMKNSYIKETT--------------QNNGFVDDTQLSTFLENNSREIQNLDV 1529

Query: 1915 GSVNGEYPVLTHVESRASVPPLEVTLXXXXXXXXXXAGNENQERLNE 2055
               + EYPVL+ VESRAS+ PLEV L          A  +N    NE
Sbjct: 1530 EYEDEEYPVLSQVESRASILPLEVDLDDVNHSNLDDAVGQNHIYTNE 1576



 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 36/57 (63%), Positives = 48/57 (84%)
 Frame = +3

Query: 3    LSLPEFNHAIGYASTADYNTQKLPHRHFVNGQSIVANIGALPGPSTAGRLLLLLNSL 173
            LSLPE+N+AIGYAS +DYNTQK   + F++GQS++A++ ALP PST GRLLL+L S+
Sbjct: 955  LSLPEYNYAIGYASVSDYNTQKFAQKQFLHGQSVIASVMALPSPSTVGRLLLVLKSV 1011


>ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 1885

 Score =  619 bits (1595), Expect = e-174
 Identities = 315/641 (49%), Positives = 433/641 (67%), Gaps = 9/641 (1%)
 Frame = +1

Query: 160  FLILSLPEFNHAIGYASTADYNTQKLPHRHFVNGQSVVANIGALPGPSTAGRXXXXXXXX 339
            +L+LS+PE ++ IGYAS +DYN Q+ PH+ + NGQSVVA + ALP P T+GR        
Sbjct: 953  YLVLSIPENDYTIGYASVSDYNAQRFPHKQYQNGQSVVATVMALPSPETSGRLLLLVDVV 1012

Query: 340  XEVXXXXXXXXXXXXXXYTVGSLVEAEITDIKPLEMRLKFGFGFQGRLHITEANDDDNID 519
             E               Y VG+LVEAEITDIK LE++LKFGFG  GR+HITE    + ++
Sbjct: 1013 NETSSSSKRTKKKSS--YKVGTLVEAEITDIKTLELKLKFGFGLYGRIHITEVYYGNVLE 1070

Query: 520  EPFQRFRIGQMVTARIVEKLDQSKKNRKQCQWDLSIKSAALSGSGETKQGLAVEEITFSS 699
             PF  +++GQ VTARIV K ++S  NRK  QW+LS++   ++GS +       E + F  
Sbjct: 1071 NPFSSYKVGQTVTARIVAKPNESDGNRKGSQWELSVRPEMVTGSSDIDD--VSENLEFKI 1128

Query: 700  GKSVCGYVVAVDNEWVWLTVSRHVKAQLFLLDSSCEPSELRDFKNRFIVGKSVTGHIINF 879
            G+ V GYV  V++EWVWLT+SR+V+AQL++LDS+ EPSEL DF+NR+ VG+ V+GHI++ 
Sbjct: 1129 GQCVAGYVYKVESEWVWLTISRNVRAQLYILDSATEPSELEDFQNRYHVGQPVSGHILSV 1188

Query: 880  NKEKRIVRLFLRPLSTVS---------NEVGNVGEHHIHEGDVIGGRITKILPGIGGLVV 1032
            N EK+++RL +RP ST+S         N V      ++HEGD++GGR++KILPG+GGL+V
Sbjct: 1189 NMEKKLLRLVVRPFSTLSCGTSEEPLTNVVDKDLTAYVHEGDILGGRVSKILPGVGGLLV 1248

Query: 1033 QIGPHLYGKVHFTELANDWVANPLSGYDEGQFVKCKVLEISRSDNGNVHFDLSLRDNKEG 1212
            Q+GP  YGKVHFTELA+ WV +PLSGY E QFVKC VLE+S +  G +H DLSL  +   
Sbjct: 1249 QVGPRTYGKVHFTELADTWVPDPLSGYHEEQFVKCIVLEVSHTVKGTIHVDLSLGSSNVK 1308

Query: 1213 TQLSMAGNFQAQRIEKIEELQKDMIVQGYVKNVMSKGCFLTLSRKVDAKVLLSNLSNGFI 1392
                 A N  ++ +EKIE+L  DMIV+GY+KNV SKGCF+ LSRK+DAK+LLSNLS  ++
Sbjct: 1309 LSQDSAVNANSKCVEKIEDLHPDMIVKGYIKNVTSKGCFIMLSRKIDAKILLSNLSEQYV 1368

Query: 1393 ESPEKDFPVGKLIQGKVLSVEPMSKRVEVTLKMDSTGDAPLFDRKDFSSLHVGDIISGRI 1572
            + PEK+FPVGKL+ G+V SVEP+S RVEVTLKM +  + P  +  D S  HVGD++SGRI
Sbjct: 1369 QEPEKEFPVGKLVIGRVTSVEPLSNRVEVTLKMSTAPNIPKSEIIDLSKFHVGDVVSGRI 1428

Query: 1573 KRIESFGLFVTIEHTNMVGLCHVSELSESDYPVENIESKFRVGERVVAKILKLDEERRRI 1752
            KR+ESFGLF+ I++TNMVGLCH+SE+  SD  +ENIE+ +R GERV A+ILK+DEER RI
Sbjct: 1429 KRVESFGLFIAIDNTNMVGLCHISEI--SDNRIENIEANYRAGERVKARILKVDEERHRI 1486

Query: 1753 SLGMKESYVTNDSTGSELLDQSTVGPIADNGVIDDHQIAGLQARNMFSAEDAEHGSVNGE 1932
            SLGMK SY+       E + Q      +D  ++D  +       ++F   + +      +
Sbjct: 1487 SLGMKNSYMR-----GETVLQIPSKEESDEPIVDGMKSITSMNSSLFGTSNIDVEDEINQ 1541

Query: 1933 YPVLTHVESRASVPPLEVTLXXXXXXXXXXAGNENQERLNE 2055
            +P+L+  + RA +PPL+V L          A ++++E  NE
Sbjct: 1542 FPILSQAQERADIPPLDVALDDFDQFDANNANSQSEEHANE 1582



 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 32/55 (58%), Positives = 44/55 (80%)
 Frame = +3

Query: 3    LSLPEFNHAIGYASTADYNTQKLPHRHFVNGQSIVANIGALPGPSTAGRLLLLLN 167
            LS+PE ++ IGYAS +DYN Q+ PH+ + NGQS+VA + ALP P T+GRLLLL++
Sbjct: 956  LSIPENDYTIGYASVSDYNAQRFPHKQYQNGQSVVATVMALPSPETSGRLLLLVD 1010



 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 84/343 (24%), Positives = 151/343 (44%), Gaps = 10/343 (2%)
 Frame = +1

Query: 853  SVTGHIINFNKEKRIVRLFLRPLSTVSNEVGNVGEHHIHEGDVIGGRITKILPGIGGLVV 1032
            S++G+ I     +R+ ++ LR ++      G V E  ++E D++      +  G+ GLV 
Sbjct: 106  SLSGNGITGKLPRRVNKITLRNITPGMKLWGVVAE--VNEKDLV----VSLPGGLRGLVH 159

Query: 1033 Q---IGPHLYGKVHFTELANDWVANPLSG-YDEGQFVKCKVLEIS--RSDNGNVHFDLSL 1194
                + P    K+   E+        LSG +  GQ V C VL +   + + G+    LSL
Sbjct: 160  ASDAVDPIFDDKIEVGEIF-------LSGVFCVGQLVSCVVLRLDDDKKEKGSRKIWLSL 212

Query: 1195 RDNKEGTQLSMAGNFQAQRIEKIEELQKDMIVQGYVKNVMSKGCFLTLSRKVDAKVLLSN 1374
            R       LS+       +   ++ +Q+ M++  YVK++   G  L          L  N
Sbjct: 213  R-------LSLL-----HKNYNLDVVQEGMVLAAYVKSIEDHGYILHFGLPFFMGFLPKN 260

Query: 1375 LSNGFIESPEKDFPVGKLIQGKVLSVEPMSKRVEVTLKMDSTGDAPLFDRKDFS--SLHV 1548
             S G+      +  +GKL+QG V S++ + K V ++   D+   +   D +  S   L  
Sbjct: 261  SSAGW----GGEVKIGKLLQGLVRSIDKVRKVVYLSSDPDTITKSVTKDLRGLSIDLLVP 316

Query: 1549 GDIISGRIKRIESFGLFVTI--EHTNMVGLCHVSELSESDYPVENIESKFRVGERVVAKI 1722
            G +++  +K I   G+ ++     T  V L H+  +    YP +N + K    ++VV++I
Sbjct: 317  GMLVNACVKSILENGVMLSFLTYFTGTVDLFHLQNI----YPGKNWKDKCSESQKVVSRI 372

Query: 1723 LKLDEERRRISLGMKESYVTNDSTGSELLDQSTVGPIADNGVI 1851
            L +D   R + L +    V N +  S +     +G I DN  +
Sbjct: 373  LFIDPSSRAVGLTLNPHLVQNRAPPSHV----KIGDIYDNSKV 411


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score =  619 bits (1595), Expect = e-174
 Identities = 320/607 (52%), Positives = 417/607 (68%)
 Frame = +1

Query: 235  LPHRHFVNGQSVVANIGALPGPSTAGRXXXXXXXXXEVXXXXXXXXXXXXXXYTVGSLVE 414
            +  + F++GQSV+A++ ALP PST GR         E               Y VGSLV+
Sbjct: 983  IARKQFLHGQSVIASVMALPSPSTVGRLLLVLKSVSEATETSSSKRAKKKSSYNVGSLVQ 1042

Query: 415  AEITDIKPLEMRLKFGFGFQGRLHITEANDDDNIDEPFQRFRIGQMVTARIVEKLDQSKK 594
            AEIT+IKPLE+RLKFG GF GR+HITE  D++ I+ PF  FRIGQ V+ARIV K ++S+ 
Sbjct: 1043 AEITEIKPLELRLKFGIGFHGRVHITEVCDENVIENPFSNFRIGQTVSARIVAKANKSEN 1102

Query: 595  NRKQCQWDLSIKSAALSGSGETKQGLAVEEITFSSGKSVCGYVVAVDNEWVWLTVSRHVK 774
            N K  QW+LSIK   L+GS E +  L   E   S+G+ V GYV  V+NEW+WLT+SRH+K
Sbjct: 1103 NGKNHQWELSIKPEMLTGSIEVENKLVDAEFRISTGQRVTGYVYKVENEWIWLTISRHIK 1162

Query: 775  AQLFLLDSSCEPSELRDFKNRFIVGKSVTGHIINFNKEKRIVRLFLRPLSTVSNEVGNVG 954
            AQLFLLD+SCEP+EL++F+ RF VGK+V+G++++ NKEK+++R+ L   S +        
Sbjct: 1163 AQLFLLDTSCEPNELQEFQKRFEVGKAVSGYVLSANKEKKLLRMVLHQFSNLI------- 1215

Query: 955  EHHIHEGDVIGGRITKILPGIGGLVVQIGPHLYGKVHFTELANDWVANPLSGYDEGQFVK 1134
              HIH+GD +GGRI+KILPG+GGL+VQIGPHLYGKVHFTEL + WV++PLSGY EGQFVK
Sbjct: 1216 -PHIHKGDTLGGRISKILPGVGGLLVQIGPHLYGKVHFTELKDSWVSDPLSGYHEGQFVK 1274

Query: 1135 CKVLEISRSDNGNVHFDLSLRDNKEGTQLSMAGNFQAQRIEKIEELQKDMIVQGYVKNVM 1314
            CKVLEI  S+ G VH DLSL  +  G       +    R+EKI+ L  DM+VQGYVKNV 
Sbjct: 1275 CKVLEIGHSEKGTVHVDLSLWSSLNGM------HSPNSRVEKIDNLHSDMLVQGYVKNVT 1328

Query: 1315 SKGCFLTLSRKVDAKVLLSNLSNGFIESPEKDFPVGKLIQGKVLSVEPMSKRVEVTLKMD 1494
            SKGCF+ LSRK+DA++LL+NLS+G++E PE++FP+GKL+ G+VLSVEP+S+RVEVTLK  
Sbjct: 1329 SKGCFILLSRKLDARILLANLSDGYVEKPEREFPIGKLVSGRVLSVEPLSRRVEVTLKTS 1388

Query: 1495 STGDAPLFDRKDFSSLHVGDIISGRIKRIESFGLFVTIEHTNMVGLCHVSELSESDYPVE 1674
            S       +  DFSS+ VGDII G IKR+ES+GLF+TI+ TNMVGLCH+SEL  SD  + 
Sbjct: 1389 SATSVQKSEVNDFSSILVGDIIFGTIKRVESYGLFITIDDTNMVGLCHISEL--SDDHIS 1446

Query: 1675 NIESKFRVGERVVAKILKLDEERRRISLGMKESYVTNDSTGSELLDQSTVGPIADNGVID 1854
            NIE+K++ GERV AKILK+DEER RISLGMK SY+   +               +NG +D
Sbjct: 1447 NIETKYKAGERVAAKILKVDEERHRISLGMKNSYIKETT--------------QNNGFVD 1492

Query: 1855 DHQIAGLQARNMFSAEDAEHGSVNGEYPVLTHVESRASVPPLEVTLXXXXXXXXXXAGNE 2034
            D Q++     N    ++ +    + EYPVL+ VESRAS+ PLEV L          A  +
Sbjct: 1493 DTQLSTFLENNSREIQNLDVEYEDEEYPVLSQVESRASILPLEVDLDDVNHSNLDDAVGQ 1552

Query: 2035 NQERLNE 2055
            N    NE
Sbjct: 1553 NHIYTNE 1559


>ref|XP_002531584.1| programmed cell death protein, putative [Ricinus communis]
            gi|223528780|gb|EEF30787.1| programmed cell death
            protein, putative [Ricinus communis]
          Length = 1330

 Score =  580 bits (1494), Expect = e-163
 Identities = 321/655 (49%), Positives = 428/655 (65%), Gaps = 25/655 (3%)
 Frame = +1

Query: 166  ILSLPEFNHAIGYASTADYNTQKLPHRHFVNGQSVVANIGALPGPSTAGRXXXXXXXXXE 345
            +LS+PE N+ IGYAS +DYN QKLP + F+NGQSVVA + ALP  STAGR         E
Sbjct: 412  VLSIPEHNYIIGYASVSDYNIQKLPQKQFLNGQSVVATVMALPSSSTAGRLLLLLKSISE 471

Query: 346  VXXXXXXXXXXXXXXYTVGSLVEAEITDIKPLEMRLKFGFGFQGRLHITEANDDDNIDEP 525
            +              Y +GSLV+AE+                         NDD  +++P
Sbjct: 472  ITETSSTKKAKKKSSYKIGSLVQAEV-------------------------NDDCFLEDP 506

Query: 526  FQRFRIGQMVTARIVEKLDQSKKNRKQCQWDLSIKSAALSGSGETKQGLAVEEITFSSGK 705
            F  F+IGQ VTARIV K  ++ KN+    W+LSIK   L+   E++  L  +E  FSSG 
Sbjct: 507  FTSFKIGQTVTARIVAKTSKADKNQ---LWELSIKPKVLTDFWESEDKLMSKEFEFSSGH 563

Query: 706  SVCGYVVAVDNEWVWLTVSRHVKAQLFLLDSSCEPSELRDFKNRFIVGKSVTGHIINFNK 885
             + GYV  VD+EW WLT+SRH+KAQLF+LDS+CEPSEL++F+ RF VGK+V+G+++++NK
Sbjct: 564  RITGYVYKVDSEWAWLTISRHLKAQLFILDSACEPSELQEFQKRFFVGKAVSGYVLSYNK 623

Query: 886  EKRIVRLFLRPLSTVS---------------NEV-GNVGEHHIHEGDVIGGRITKILPGI 1017
            EK ++RL  RPL  VS               NEV  +    +I EGD++GG+I+KIL G+
Sbjct: 624  EKTLLRLVQRPLCAVSCIHVNGEALNKNDAQNEVRRDNAAAYIQEGDIVGGKISKILSGV 683

Query: 1018 GGLVVQIGPHLYGKVHFTELANDWVANPLSGYDEGQFVKCKVLEISRSDNGNVHFDLSLR 1197
            GG++VQIGPH++GKVH+TEL   WV NPL GY EGQFVKCKVLEISRSD G  H DLSLR
Sbjct: 684  GGVLVQIGPHVHGKVHYTELQESWVPNPLDGYREGQFVKCKVLEISRSDKGTTHIDLSLR 743

Query: 1198 DNKEGTQLSMAGNFQA---QRIEKIEELQKDMIVQGYVKNVMSKGCFLTLSRKVDAKVLL 1368
             + +G     +        QR+EKI++LQ + +VQGYVKNV  KGCF+ LSRK+DAK+LL
Sbjct: 744  FSLDGMLSQNSSELSKNADQRVEKIDDLQPNTVVQGYVKNVAPKGCFIFLSRKIDAKILL 803

Query: 1369 SNLSNGFIESPEKDFPVGKLIQGKVLSVEPMSKRVEVTLKMD--STGDAPLFDRKDFSSL 1542
            SNLS+ F+ SPE++FP+GKL+ G+VLSVEP+SKRVEVTLK +  STG + L    D S L
Sbjct: 804  SNLSDEFVVSPEEEFPIGKLVTGRVLSVEPLSKRVEVTLKKNAKSTGKSEL---NDLSRL 860

Query: 1543 HVGDIISGRIKRIESFGLFVTIEHTNMVGLCHVSELSESDYPVENIESKFRVGERVVAKI 1722
            +VGD  SGRIKR+E +GLF+ I+HTN+VGLCHVSEL  SD  V+++E+K+R GE+V A+I
Sbjct: 861  NVGDTASGRIKRVEPYGLFIAIDHTNLVGLCHVSEL--SDDHVDSVETKYRAGEKVTARI 918

Query: 1723 LKLDEERRRISLGMKESYVTNDSTGSELLDQSTVGPIADNGVIDDHQIAGLQARNMFSAE 1902
            LK+D ERRRISLG+K     ND+      ++S+   I++NG  DD       ++  +S+ 
Sbjct: 919  LKVDVERRRISLGIKNLDNGNDTDILPSQEESS-DAISENGTTDDG-----DSKPHYSSS 972

Query: 1903 DAEHG----SVNGEYPVLTHVESRASVPPLEVTLXXXXXXXXXXAGNENQERLNE 2055
             A  G    S N E+ VL H ESRAS+PPL VTL            ++ QE++++
Sbjct: 973  PAIEGMDIESENEEHAVLAHAESRASIPPLNVTLDDVEHSDVDDTISQTQEQIDK 1027



 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = +3

Query: 3   LSLPEFNHAIGYASTADYNTQKLPHRHFVNGQSIVANIGALPGPSTAGRLLLLLNSL 173
           LS+PE N+ IGYAS +DYN QKLP + F+NGQS+VA + ALP  STAGRLLLLL S+
Sbjct: 413 LSIPEHNYIIGYASVSDYNIQKLPQKQFLNGQSVVATVMALPSSSTAGRLLLLLKSI 469


>ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Arabidopsis lyrata subsp.
            lyrata] gi|297330716|gb|EFH61135.1| S1 RNA-binding
            domain-containing protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1843

 Score =  572 bits (1473), Expect = e-160
 Identities = 311/659 (47%), Positives = 418/659 (63%), Gaps = 30/659 (4%)
 Frame = +1

Query: 163  LILSLPEFNHAIGYASTADYNTQKLPHRHFVNGQSVVANIGALPGPSTAGRXXXXXXXXX 342
            L+LS+PE  + +GYAS +DYNTQKLP + F  GQSVVA++ A+  P T+GR         
Sbjct: 891  LVLSIPEHGYTVGYASLSDYNTQKLPVKQFSTGQSVVASVEAVQNPLTSGRLLLLLDSVS 950

Query: 343  EVXXXXXXXXXXXXXXYTVGSLVEAEITDIKPLEMRLKFGFGFQGRLHITEANDDDNIDE 522
                              VGS+V AEIT+IKP E+R+ FG  F+GR+HITE ND    DE
Sbjct: 951  GTSETSRSKRAKKKSSCEVGSVVHAEITEIKPFELRVNFGNSFRGRIHITEVNDASTSDE 1010

Query: 523  PFQRFRIGQMVTARIVEKLDQSKKNRKQCQWDLSIKSAALSGSGETKQGLAVEEITFSSG 702
            PF +FR+GQ ++AR+V K   +   + Q  W+LS+K A L  S E       E++ F +G
Sbjct: 1011 PFAKFRVGQSMSARVVSKPCHTDIKKSQL-WELSVKPAMLRDSSELNDIQESEQLEFVAG 1069

Query: 703  KSVCGYVVAVDNEWVWLTVSRHVKAQLFLLDSSCEPSELRDFKNRFIVGKSVTGHIINFN 882
            + V GYV  VD EWVWL +SR+V A++F+LD++CE  EL +F+  F +GK+V+G+++ +N
Sbjct: 1070 QCVNGYVYKVDKEWVWLAISRNVTARIFILDTACEAHELEEFERHFPIGKAVSGYVLTYN 1129

Query: 883  KEKRIVRLFLRPLSTVSNEVGNVGEHH----------------IHEGDVIGGRITKILPG 1014
            KEKR +RL  RPL  +   + N G                   IHEGD++GGRI+KILPG
Sbjct: 1130 KEKRTLRLVQRPLLDIHKSIANGGGSKTDKLDISIPGDDGTLFIHEGDILGGRISKILPG 1189

Query: 1015 IGGLVVQIGPHLYGKVHFTELANDWVANPLSGYDEGQFVKCKVLEISRSDNGNVHFDLSL 1194
            +GGL VQIGP+++G+VHFTE+ + WV NPL G+ EGQFVKCKVLEIS S  G    +LSL
Sbjct: 1190 VGGLRVQIGPYVFGRVHFTEINDLWVPNPLDGFREGQFVKCKVLEISSSSKGTWQIELSL 1249

Query: 1195 RDNKEGTQLSMAGNFQ---------AQRIEKIEELQKDMIVQGYVKNVMSKGCFLTLSRK 1347
            R + +G  +S A +            +R E+ E+L  DM VQGYVKN MSKGCF+ LSRK
Sbjct: 1250 RTSLDG--MSSADHISEDLNNNDNVCKRFERFEDLSLDMGVQGYVKNTMSKGCFIILSRK 1307

Query: 1348 VDAKVLLSNLSNGFIESPEKDFPVGKLIQGKVLSVEPMSKRVEVTLKMDSTGDAPLFDRK 1527
            V+AKV LSNL + F++ PEK+FPVGKL+ G+VL+VEP+SKR+EVTLK  + G  P  +  
Sbjct: 1308 VEAKVKLSNLCDTFVKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGQPKSESY 1367

Query: 1528 DFSSLHVGDIISGRIKRIESFGLFVTIEHTNMVGLCHVSELSESDYPVENIESKFRVGER 1707
            D   LHVGD+ISGRIKR+E +GLF+ I+   MVGLCH+++L  SD  +EN++++++ GE 
Sbjct: 1368 DMKKLHVGDMISGRIKRVEPYGLFIDIDQIGMVGLCHITQL--SDDRIENVQARYKAGES 1425

Query: 1708 VVAKILKLDEERRRISLGMKESYVTNDSTGSELLDQSTVGPIADN-----GVIDDHQIAG 1872
            V AKILKLDEE+RRISLGMK SY+ N   G ++  Q      AD        I+D     
Sbjct: 1426 VSAKILKLDEEKRRISLGMKSSYLMN---GDDVKAQPPSEEKADETSMECDPINDPNTEV 1482

Query: 1873 LQARNMFSAEDAEHGSVNGEYPVLTHVESRASVPPLEVTLXXXXXXXXXXAGNENQERL 2049
            L A   F  ++   G  +G   VL  V+SRAS+PPLEV L            N+NQE+L
Sbjct: 1483 LAAVGDFGFQETSGGRHSGASLVLAQVDSRASIPPLEVDLDDIEEMDFD--NNQNQEKL 1539



 Score = 72.0 bits (175), Expect = 6e-10
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = +3

Query: 3    LSLPEFNHAIGYASTADYNTQKLPHRHFVNGQSIVANIGALPGPSTAGRLLLLLNSL 173
            LS+PE  + +GYAS +DYNTQKLP + F  GQS+VA++ A+  P T+GRLLLLL+S+
Sbjct: 893  LSIPEHGYTVGYASLSDYNTQKLPVKQFSTGQSVVASVEAVQNPLTSGRLLLLLDSV 949