BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012336
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   169   2e-40
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   159   3e-37
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   159   3e-37
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...   158   4e-37
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...   156   2e-36

>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  169 bits (429), Expect = 2e-40
 Identities = 84/173 (48%), Positives = 111/173 (64%)
 Frame = +1

Query: 1   VIGVGKQQGGVYWLRTIGSEVRASSARSPAYSKAAALWHRRLGHPSSSALSSITELNLNK 180
           +IG G+++ GVY+   + +  R   A S  ++ +  LWHRRLGHPS+S L S+ E N + 
Sbjct: 467 LIGAGEEREGVYYFTGVLAP-RVHKASSD-FAISGDLWHRRLGHPSTSVLLSLPECNRSS 524

Query: 181 SCLDTLPPCDSCHLAKQTRLSFPISSNKAADLFDLVHCDVWGPYSTPSLAKNSYFLTIVD 360
              D +  CD+C  +KQTR  FPIS+NK  + F L+H DVWGPY TPS     YFLT+VD
Sbjct: 525 QGFDKIDSCDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGPYRTPSTTGAVYFLTLVD 584

Query: 361 DFSRAVWVYFFSAKSEVAHLFKKFCTFVATQFRKQVRRVRADNRTEFLPLRPY 519
           D+SR+VW Y  S+K+EV+ L K FC     QF KQV+  R DN TEF+ L PY
Sbjct: 585 DYSRSVWTYLMSSKTEVSQLIKNFCAMSERQFGKQVKAFRTDNGTEFMCLTPY 637


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  159 bits (401), Expect = 3e-37
 Identities = 83/173 (47%), Positives = 105/173 (60%)
 Frame = +1

Query: 1   VIGVGKQQGGVYWLRTIGSEVRASSARSPAYSKAAALWHRRLGHPSSSALSSITELNLNK 180
           +IG G+++ GVY+L    ++   ++      +   ALWH+RLGHPS S LSS+  L    
Sbjct: 480 LIGTGEERDGVYYL----TDAATTTVHKVDVTTDHALWHQRLGHPSFSVLSSLP-LFSGS 534

Query: 181 SCLDTLPPCDSCHLAKQTRLSFPISSNKAADLFDLVHCDVWGPYSTPSLAKNSYFLTIVD 360
           SC  +   CD C  AKQTR  FP SSNK+ D F L+HCDVWGPY  PS     YFLTIVD
Sbjct: 535 SCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVD 594

Query: 361 DFSRAVWVYFFSAKSEVAHLFKKFCTFVATQFRKQVRRVRADNRTEFLPLRPY 519
           DFSR+VW Y   AKSEV  +   F  +   QF K V+ +R+DN TEF+ L  Y
Sbjct: 595 DFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSY 647


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  159 bits (401), Expect = 3e-37
 Identities = 83/173 (47%), Positives = 105/173 (60%)
 Frame = +1

Query: 1   VIGVGKQQGGVYWLRTIGSEVRASSARSPAYSKAAALWHRRLGHPSSSALSSITELNLNK 180
           +IG G+++ GVY+L    ++   ++      +   ALWH+RLGHPS S LSS+  L    
Sbjct: 480 LIGTGEERDGVYYL----TDAATTTVHKVDITTDHALWHQRLGHPSFSVLSSLP-LFSGS 534

Query: 181 SCLDTLPPCDSCHLAKQTRLSFPISSNKAADLFDLVHCDVWGPYSTPSLAKNSYFLTIVD 360
           SC  +   CD C  AKQTR  FP SSNK+ D F L+HCDVWGPY  PS     YFLTIVD
Sbjct: 535 SCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVD 594

Query: 361 DFSRAVWVYFFSAKSEVAHLFKKFCTFVATQFRKQVRRVRADNRTEFLPLRPY 519
           DFSR+VW Y   AKSEV  +   F  +   QF K V+ +R+DN TEF+ L  Y
Sbjct: 595 DFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSY 647


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score =  158 bits (400), Expect = 4e-37
 Identities = 82/173 (47%), Positives = 107/173 (61%)
 Frame = +1

Query: 1   VIGVGKQQGGVYWLRTIGSEVRASSARSPAYSKAAALWHRRLGHPSSSALSSITELNLNK 180
           +IG G+++ GVY+L    ++V  +   +   S   ALWH+RLGHPS S LSS+  L  + 
Sbjct: 58  LIGSGEERDGVYYL----TDVATAKIHTAKVSSDQALWHQRLGHPSFSVLSSLPVLTSSS 113

Query: 181 SCLDTLPPCDSCHLAKQTRLSFPISSNKAADLFDLVHCDVWGPYSTPSLAKNSYFLTIVD 360
             + +   CD C  AKQTR  FP+S+NK+ + F L+HCDVWGPY  PS     YFLTIVD
Sbjct: 114 LSVGSRS-CDVCFRAKQTREVFPVSTNKSIECFSLIHCDVWGPYRVPSSCGAVYFLTIVD 172

Query: 361 DFSRAVWVYFFSAKSEVAHLFKKFCTFVATQFRKQVRRVRADNRTEFLPLRPY 519
           DFSRAVW Y   AKSEV  +   F  +   QF K V+ +R+DN TEF+ L  Y
Sbjct: 173 DFSRAVWTYLLLAKSEVRTVLTNFLVYTEKQFGKSVKVLRSDNGTEFMCLASY 225


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score =  156 bits (394), Expect = 2e-36
 Identities = 88/175 (50%), Positives = 107/175 (61%), Gaps = 2/175 (1%)
 Frame = +1

Query: 1   VIGVGKQQGGVYWLRTIGSEVRASSARSPAYSKAAALWHRRLGHPSSSALSSIT-ELNLN 177
           +IGVG +  GVY L+   +EV A+SA    +    ALWH RLGHPSS  LSS+   L   
Sbjct: 479 LIGVGTESNGVYHLQR--AEVVATSANVVKWKTNKALWHMRLGHPSSKVLSSVLPSLEDF 536

Query: 178 KSCLDTLPP-CDSCHLAKQTRLSFPISSNKAADLFDLVHCDVWGPYSTPSLAKNSYFLTI 354
            SC   L   CD C  AKQTR SF  S NKA + F  +H DVWGPY   S     YFLTI
Sbjct: 537 DSCSSDLKTICDVCVRAKQTRASFSESFNKAEECFSFIHYDVWGPYKHASSCGAHYFLTI 596

Query: 355 VDDFSRAVWVYFFSAKSEVAHLFKKFCTFVATQFRKQVRRVRADNRTEFLPLRPY 519
           VDD SRAVW++   AKSEVA L ++F    + QF KQV+ VR++N TEF+ L+ Y
Sbjct: 597 VDDHSRAVWIHLMLAKSEVASLLQQFIAMASRQFNKQVKTVRSNNGTEFMSLKSY 651