BLASTX nr result
ID: Aconitum21_contig00012268
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00012268
(1075 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 278 2e-72
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 278 2e-72
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 268 1e-69
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 268 1e-69
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 257 3e-66
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA1-like [Cucumis sativus]
Length = 1652
Score = 278 bits (711), Expect = 2e-72
Identities = 157/329 (47%), Positives = 203/329 (61%), Gaps = 29/329 (8%)
Frame = -2
Query: 1074 DETEDLDTDTQKRKRQHTDEMEYEDGNQ---NTEGEASGFESEIDRVETEDENNSDEDQA 904
D EDL +D +K+K Q DEM+YED ++ N + ++GFESE+D+ + + N+D +
Sbjct: 1323 DVAEDLGSDXEKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEAEITNNDMIEI 1382
Query: 903 VN---AEDESGLGXXXXXXXXXXXXXXXXXXXXSGISIAPKETDRAIFLNFEGNVLEVNF 733
V +E++ + + KETDR+IF+ + N EV+F
Sbjct: 1383 VKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSELVRKETDRSIFVEAKENHFEVHF 1442
Query: 732 KLTNEPHILLSQIXXXXXXXXXXXXXXKIDGCKVYT----------------------KQ 619
K TNEPH LLSQI KI C+ T ++
Sbjct: 1443 KFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEK 1502
Query: 618 NKPPKINTSGVDLLALWGMQDDLDVNKIKSNDIHAILQTYGVEAARATIVKQLNKVFQTH 439
K P + TSGVD LW MQD+LDV I SNDIHA+LQTYGVEAARATI++++ +F ++
Sbjct: 1503 EKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSY 1562
Query: 438 GISTNFRHLSLIADFMTHSGKYRPMSR-HGMSDTISPFSKMTFETASTFIVNAAYHGEVD 262
GIS N RHLSL+AD+MTHSG YRPMSR G+SD+ISPFS+MTFETA FIV AA HGEVD
Sbjct: 1563 GISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVD 1622
Query: 261 NLESPSARICLGLPVKMGTGCFDLMQKVQ 175
NLE+PS+RICLGLPVKMGTG FDLMQK++
Sbjct: 1623 NLETPSSRICLGLPVKMGTGSFDLMQKIE 1651
>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
sativus]
Length = 1650
Score = 278 bits (710), Expect = 2e-72
Identities = 157/329 (47%), Positives = 203/329 (61%), Gaps = 29/329 (8%)
Frame = -2
Query: 1074 DETEDLDTDTQKRKRQHTDEMEYEDGNQ---NTEGEASGFESEIDRVETEDENNSDEDQA 904
D EDL +D +K+K Q DEM+YED ++ N + ++GFESE+D+ + + N+D +
Sbjct: 1321 DVAEDLGSDMKKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEAEITNNDMIEI 1380
Query: 903 VN---AEDESGLGXXXXXXXXXXXXXXXXXXXXSGISIAPKETDRAIFLNFEGNVLEVNF 733
V +E++ + + KETDR+IF+ + N EV+F
Sbjct: 1381 VKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSELVRKETDRSIFVEAKENHFEVHF 1440
Query: 732 KLTNEPHILLSQIXXXXXXXXXXXXXXKIDGCKVYT----------------------KQ 619
K TNEPH LLSQI KI C+ T ++
Sbjct: 1441 KFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEK 1500
Query: 618 NKPPKINTSGVDLLALWGMQDDLDVNKIKSNDIHAILQTYGVEAARATIVKQLNKVFQTH 439
K P + TSGVD LW MQD+LDV I SNDIHA+LQTYGVEAARATI++++ +F ++
Sbjct: 1501 EKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSY 1560
Query: 438 GISTNFRHLSLIADFMTHSGKYRPMSR-HGMSDTISPFSKMTFETASTFIVNAAYHGEVD 262
GIS N RHLSL+AD+MTHSG YRPMSR G+SD+ISPFS+MTFETA FIV AA HGEVD
Sbjct: 1561 GISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVD 1620
Query: 261 NLESPSARICLGLPVKMGTGCFDLMQKVQ 175
NLE+PS+RICLGLPVKMGTG FDLMQK++
Sbjct: 1621 NLETPSSRICLGLPVKMGTGSFDLMQKIE 1649
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 268 bits (686), Expect = 1e-69
Identities = 152/322 (47%), Positives = 193/322 (59%), Gaps = 25/322 (7%)
Frame = -2
Query: 1065 EDLDTDTQKRKRQHTDEMEYEDGN-QNTEGEAS-GFESEIDRVETEDENNSDEDQAVNAE 892
EDL D QKRK+Q +DEM+Y D + EGE S G EID VE E E +++E+ ++
Sbjct: 1347 EDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGISDP 1406
Query: 891 DESGLGXXXXXXXXXXXXXXXXXXXXSGISIAPKETDRAIFLNFEGNVLEVNFKLTNEPH 712
+ K+ DRAI + +G EV+F+ TNEPH
Sbjct: 1407 KDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPH 1466
Query: 711 ILLSQIXXXXXXXXXXXXXXKIDGCKVYT----------------------KQNKPPKIN 598
ILL+QI KID C+V ++ K P +
Sbjct: 1467 ILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPALQ 1526
Query: 597 TSGVDLLALWGMQDDLDVNKIKSNDIHAILQTYGVEAARATIVKQLNKVFQTHGISTNFR 418
T+GVD A W MQD+LDV + SN++HA+L T+GVEAARATI+K++ VF +G+ N R
Sbjct: 1527 TAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIR 1586
Query: 417 HLSLIADFMTHSGKYRPMSRH-GMSDTISPFSKMTFETASTFIVNAAYHGEVDNLESPSA 241
HLSLIADFMTHSG YRPM+RH G+++++SPFSKMTFETAS FIV AA HG DNLES SA
Sbjct: 1587 HLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASA 1646
Query: 240 RICLGLPVKMGTGCFDLMQKVQ 175
RICLGLPVKMGTGCFDLMQK++
Sbjct: 1647 RICLGLPVKMGTGCFDLMQKIE 1668
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 268 bits (686), Expect = 1e-69
Identities = 152/322 (47%), Positives = 193/322 (59%), Gaps = 25/322 (7%)
Frame = -2
Query: 1065 EDLDTDTQKRKRQHTDEMEYEDGN-QNTEGEAS-GFESEIDRVETEDENNSDEDQAVNAE 892
EDL D QKRK+Q +DEM+Y D + EGE S G EID VE E E +++E+ ++
Sbjct: 1418 EDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGISDP 1477
Query: 891 DESGLGXXXXXXXXXXXXXXXXXXXXSGISIAPKETDRAIFLNFEGNVLEVNFKLTNEPH 712
+ K+ DRAI + +G EV+F+ TNEPH
Sbjct: 1478 KDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPH 1537
Query: 711 ILLSQIXXXXXXXXXXXXXXKIDGCKVYT----------------------KQNKPPKIN 598
ILL+QI KID C+V ++ K P +
Sbjct: 1538 ILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPALQ 1597
Query: 597 TSGVDLLALWGMQDDLDVNKIKSNDIHAILQTYGVEAARATIVKQLNKVFQTHGISTNFR 418
T+GVD A W MQD+LDV + SN++HA+L T+GVEAARATI+K++ VF +G+ N R
Sbjct: 1598 TAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIR 1657
Query: 417 HLSLIADFMTHSGKYRPMSRH-GMSDTISPFSKMTFETASTFIVNAAYHGEVDNLESPSA 241
HLSLIADFMTHSG YRPM+RH G+++++SPFSKMTFETAS FIV AA HG DNLES SA
Sbjct: 1658 HLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASA 1717
Query: 240 RICLGLPVKMGTGCFDLMQKVQ 175
RICLGLPVKMGTGCFDLMQK++
Sbjct: 1718 RICLGLPVKMGTGCFDLMQKIE 1739
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 257 bits (657), Expect = 3e-66
Identities = 157/341 (46%), Positives = 206/341 (60%), Gaps = 41/341 (12%)
Frame = -2
Query: 1074 DETEDLDTDTQKRKRQHTDEMEYEDGNQN--TEGEA------SGFESEIDRVETEDENNS 919
+ +DL D QKRK Q TDEM+Y+DG + EGE+ SGFESEID+ + E E ++
Sbjct: 1345 ERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEESGFESEIDQGDNETEISN 1404
Query: 918 D---EDQAVN-------AEDESGLGXXXXXXXXXXXXXXXXXXXXSGISIAPKETDRAIF 769
D +++A ++ +S S K+ DRAIF
Sbjct: 1405 DVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIF 1464
Query: 768 LNFEGNVLEVNFKLTNEPHILLSQIXXXXXXXXXXXXXXKIDGCKV----------YTK- 622
+ EV+FK TNEPHILL++I KI+ C+V Y K
Sbjct: 1465 VEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKESQVIYYGKD 1524
Query: 621 -----------QNKPPKINTSGVDLLALWGMQDDLDVNKIKSNDIHAILQTYGVEAARAT 475
+ K P ++ +GVD W MQD LDV I SN+IHA+L+TYGVEAAR T
Sbjct: 1525 PKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARET 1584
Query: 474 IVKQLNKVFQTHGISTNFRHLSLIADFMTHSGKYRPMSR-HGMSDTISPFSKMTFETAST 298
I++++N VF+++GI+ + RHLSLIADFMTH+G YRPMSR G++++ISPFSKM+FETAS
Sbjct: 1585 IIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASK 1644
Query: 297 FIVNAAYHGEVDNLESPSARICLGLPVKMGTGCFDLMQKVQ 175
FIV AA HGE+DNLE+PSARICLGLPVKMGTG FDLMQK++
Sbjct: 1645 FIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKLE 1685