BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012199
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|2...   441   e-121
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...   436   e-120
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...   425   e-117
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...   411   e-113
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab...   400   e-109

>ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|222868352|gb|EEF05483.1|
            predicted protein [Populus trichocarpa]
          Length = 1141

 Score =  441 bits (1133), Expect = e-121
 Identities = 221/289 (76%), Positives = 254/289 (87%), Gaps = 2/289 (0%)
 Frame = +3

Query: 3    KSKTNIVIDKEKIYLQLNAFAALIPIMVVMKAMGMESDQEVVQMLGRDPRYAALLLPSIQ 182
            KSKT I+++KEK+YL LN FA  IPIMVVMKAMGMESDQEVVQM+GRDPRY+ALLLPSI+
Sbjct: 208  KSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIE 267

Query: 183  ECAAANVHTQQQALEYLEKKVTRSQFSRAS--QEGRALNILRQTFIANVVVRENNFRPKC 356
            ECA+  V+TQQQALEYLE  V RS +S +S  +E RAL ILR  FIANV VR+NNFRPKC
Sbjct: 268  ECASHGVYTQQQALEYLEAMVKRSTYSSSSTEKENRALAILRDVFIANVPVRKNNFRPKC 327

Query: 357  IYAAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQSISLLFEDLFKTTNSEIIKYADQA 536
            IY AVMLRRMMEA+LNKDAMDDKDYVGNKRLELSGQ ISLLFEDLFKT  +E+ K AD  
Sbjct: 328  IYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEVQKTADTL 387

Query: 537  IAKPTRSTKFDMSQYLKKDIITHGLERAMATGNWDIKRFRMHRKGMTQVLARLSFIATVG 716
            + K  RS++FD SQY+ +D IT+GLERA++TGNWD+KRFRM+RKG+TQVL RLS++A++G
Sbjct: 388  LVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWDVKRFRMNRKGVTQVLVRLSYMASLG 447

Query: 717  HMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALM 863
            HMT+I PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALM
Sbjct: 448  HMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALM 496


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score =  436 bits (1121), Expect = e-120
 Identities = 218/292 (74%), Positives = 255/292 (87%), Gaps = 5/292 (1%)
 Frame = +3

Query: 3    KSKTNIVIDKEKIYLQLNAFAALIPIMVVMKAMGMESDQEVVQMLGRDPRYAALLLPSIQ 182
            KSKT IV++KEKI+LQLN F + IPIM+VMKAMGMESDQEVVQM+GR+PRY+ALLLPS++
Sbjct: 209  KSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGMESDQEVVQMVGRNPRYSALLLPSME 268

Query: 183  ECAAANVHTQQQALEYLEKKVTRSQFSRAS--QEGRALNILRQTFIANVVVRENNFRPKC 356
            ECA+  ++TQQQALE+LE+KV +  F   S  +EGR + ILR TFIANV VR+NNFRPKC
Sbjct: 269  ECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEGRGMAILRDTFIANVPVRQNNFRPKC 328

Query: 357  IYAAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQSISLLFEDLFKTTNSEIIKYADQA 536
            +Y AVMLRRMM+AILNKDAMDDKDYVGNKRLELSGQ ISLLFEDLFKT  SE+ K  D  
Sbjct: 329  LYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMISEVKKTIDAI 388

Query: 537  IAKPTRSTKFDMSQYLK---KDIITHGLERAMATGNWDIKRFRMHRKGMTQVLARLSFIA 707
            +AKP+RS++FD SQ L+   +D IT GLER ++TGNWD+KRFRMHRKGM+QV+ARLS+I 
Sbjct: 389  LAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGNWDVKRFRMHRKGMSQVVARLSYIG 448

Query: 708  TVGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALM 863
            ++GHMTKI PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALM
Sbjct: 449  SLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALM 500


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score =  425 bits (1092), Expect = e-117
 Identities = 213/290 (73%), Positives = 248/290 (85%), Gaps = 3/290 (1%)
 Frame = +3

Query: 3    KSKTNIVIDKEKIYLQLNAFAA-LIPIMVVMKAMGMESDQEVVQMLGRDPRYAALLLPSI 179
            KSKT I ++ EKIYLQLN F    IPIMVV+KAMGMES QEVVQM+GRDPRY ALLLPSI
Sbjct: 229  KSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGMESIQEVVQMVGRDPRYGALLLPSI 288

Query: 180  QECAAANVHTQQQALEYLEKKVTRSQFSRA--SQEGRALNILRQTFIANVVVRENNFRPK 353
            +ECA   ++TQ+QALEYLE KV + QF+ A   +EGRAL ILR  F+ANV V +NNF PK
Sbjct: 289  EECAKEKIYTQEQALEYLETKVKKFQFASAPPEKEGRALGILRDVFLANVPVYKNNFHPK 348

Query: 354  CIYAAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQSISLLFEDLFKTTNSEIIKYADQ 533
            CIY AVM+RRMM+AIL+KDAMDDKDYVGNKRLELSGQ ISLLFEDLFKT  SE+ K  D+
Sbjct: 349  CIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDK 408

Query: 534  AIAKPTRSTKFDMSQYLKKDIITHGLERAMATGNWDIKRFRMHRKGMTQVLARLSFIATV 713
             + K +RS++FD SQ+L  +II+ GLER ++TGNWD+KRFRMHRKGM+QVLARLSFI+T+
Sbjct: 409  LLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTM 468

Query: 714  GHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALM 863
            GH+T++ PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALM
Sbjct: 469  GHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALM 518


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score =  411 bits (1057), Expect = e-113
 Identities = 204/287 (71%), Positives = 242/287 (84%)
 Frame = +3

Query: 3    KSKTNIVIDKEKIYLQLNAFAALIPIMVVMKAMGMESDQEVVQMLGRDPRYAALLLPSIQ 182
            KSKT I ++KEK+YL LN F   IPIMVV+KAMGMESDQEVVQM+GRDPRY+ALLLPSI+
Sbjct: 225  KSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMGMESDQEVVQMVGRDPRYSALLLPSIE 284

Query: 183  ECAAANVHTQQQALEYLEKKVTRSQFSRASQEGRALNILRQTFIANVVVRENNFRPKCIY 362
            ECA  +++TQQ+ALEYL+ K           E RAL ILR  F+ANV V +NNFRPKC+Y
Sbjct: 285  ECAGLSIYTQQKALEYLDGK-----------ENRALTILRDVFLANVPVHKNNFRPKCLY 333

Query: 363  AAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQSISLLFEDLFKTTNSEIIKYADQAIA 542
             AVMLRRMMEA+LNKDAMDDKDYVGNKRLELSGQ ISLLFEDLFKT  +E+ +  D  + 
Sbjct: 334  VAVMLRRMMEAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEVQRTIDTVLT 393

Query: 543  KPTRSTKFDMSQYLKKDIITHGLERAMATGNWDIKRFRMHRKGMTQVLARLSFIATVGHM 722
            K  RS++FD++QY+ +D IT+GLER ++TGN+D+KRF+MHRKGMTQVL RLS+IA++G M
Sbjct: 394  KQNRSSRFDLAQYIVRDNITNGLERTLSTGNFDVKRFKMHRKGMTQVLVRLSYIASLGMM 453

Query: 723  TKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALM 863
            T++ PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALM
Sbjct: 454  TRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALM 500


>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
            lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
            ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
          Length = 1165

 Score =  400 bits (1029), Expect = e-109
 Identities = 201/292 (68%), Positives = 244/292 (83%), Gaps = 5/292 (1%)
 Frame = +3

Query: 3    KSKTNIVIDKEKIYLQLNAFAALIPIMVVMKAMGMESDQEVVQMLGRDPRYAALLLPSIQ 182
            KSKT I ++KEKIYL L+ F   IPI++V+KAMGMESDQE+VQM+GRDPR++A LLPSI+
Sbjct: 220  KSKTVIQMEKEKIYLFLHQFVKKIPIVIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIE 279

Query: 183  ECAAANVHTQQQALEYLEKKVTRSQFSRASQ-EGRALNILRQTFIANVVVRENNFRPKCI 359
            EC +  V+TQ+QAL+YLE KV ++ +    + +GRAL ILR  F+A+V VR+NNFR KC 
Sbjct: 280  ECVSEGVNTQKQALDYLEAKVKKTSYGPPPEKDGRALYILRDLFLAHVPVRDNNFRQKCF 339

Query: 360  YAAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQSISLLFEDLFKTTNSEIIKYADQAI 539
            Y  VMLRRM+EA+LNKD+MDDKDYVGNKRLELSGQ +SLLFEDLFKT  SE IK  D  +
Sbjct: 340  YVGVMLRRMIEAMLNKDSMDDKDYVGNKRLELSGQLMSLLFEDLFKTMLSEAIKKVDAIL 399

Query: 540  AKPTRSTKFDMSQYL----KKDIITHGLERAMATGNWDIKRFRMHRKGMTQVLARLSFIA 707
            +KP+R+++FD SQYL     ++ I+ GLER ++TGN+DIKRFRMHRKGMTQVL RLSFI 
Sbjct: 400  SKPSRASRFDFSQYLTTGDSQNTISVGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIG 459

Query: 708  TVGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALM 863
            ++G +TKI PQFEKSRKVSGPR+LQPSQWGMLCPCDTPEGESCGLVKNLALM
Sbjct: 460  SLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALM 511