BLASTX nr result

ID: Aconitum21_contig00012186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012186
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis...   106   2e-21
gb|ACF74274.1| GroES-like protein [Arachis hypogaea]                  105   3e-21
gb|AFK40252.1| unknown [Lotus japonicus]                              105   5e-21
gb|AAM77651.1|AF522274_1 cp10-like protein [Gossypium hirsutum]       104   8e-21
ref|NP_197572.1| chaperonin 20 [Arabidopsis thaliana] gi|3068793...   103   2e-20

>ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis]
           gi|223544718|gb|EEF46234.1| groes chaperonin, putative
           [Ricinus communis]
          Length = 253

 Score =  106 bits (265), Expect = 2e-21
 Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
 Frame = +2

Query: 80  MAAVQVSGSGIS-TPXXXXXXXXXXXXTARFSSLAISTNNKRSFRGLVVKAATVVAPKYT 256
           MA  Q++ S +S +             T +F+SL     ++RSFR LVVKAATVVAPKYT
Sbjct: 1   MATAQLTASSVSLSARNLTSFEGLRPSTVKFASLKAGGLSQRSFRSLVVKAATVVAPKYT 60

Query: 257 SIKPLGDRVLVKIKTAEEKSTGGILLPTTAQSKPQGG 367
           SIKPLGDRVL+KIK AEEK+ GGILLPT+AQ+KPQGG
Sbjct: 61  SIKPLGDRVLLKIKVAEEKTDGGILLPTSAQTKPQGG 97


>gb|ACF74274.1| GroES-like protein [Arachis hypogaea]
          Length = 202

 Score =  105 bits (263), Expect = 3e-21
 Identities = 58/96 (60%), Positives = 68/96 (70%)
 Frame = +2

Query: 80  MAAVQVSGSGISTPXXXXXXXXXXXXTARFSSLAISTNNKRSFRGLVVKAATVVAPKYTS 259
           MA  Q++ S IS+                 S + I T  +RSFRGLVVKAATVVAPKYT+
Sbjct: 1   MATAQLTASSISSRNVSSFEGLRPSAVQFPSVVRIGTLTQRSFRGLVVKAATVVAPKYTA 60

Query: 260 IKPLGDRVLVKIKTAEEKSTGGILLPTTAQSKPQGG 367
           I+PLGDRVLVKIK AEEK+ GGILLP+TAQ+KPQGG
Sbjct: 61  IRPLGDRVLVKIKEAEEKTDGGILLPSTAQTKPQGG 96


>gb|AFK40252.1| unknown [Lotus japonicus]
          Length = 252

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/96 (59%), Positives = 67/96 (69%)
 Frame = +2

Query: 80  MAAVQVSGSGISTPXXXXXXXXXXXXTARFSSLAISTNNKRSFRGLVVKAATVVAPKYTS 259
           MA  Q++ S IST                   + I+   +RSFRGL+VKAATVVAPK+T+
Sbjct: 1   MATTQLTASSISTRNVASFEGLRPIQFPCAGLVRIANPTRRSFRGLLVKAATVVAPKFTA 60

Query: 260 IKPLGDRVLVKIKTAEEKSTGGILLPTTAQSKPQGG 367
           IKPLGDRVLVKIK +EEKS GGILLPTTAQ+KPQGG
Sbjct: 61  IKPLGDRVLVKIKESEEKSQGGILLPTTAQTKPQGG 96


>gb|AAM77651.1|AF522274_1 cp10-like protein [Gossypium hirsutum]
          Length = 256

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/67 (79%), Positives = 56/67 (83%)
 Frame = +2

Query: 167 FSSLAISTNNKRSFRGLVVKAATVVAPKYTSIKPLGDRVLVKIKTAEEKSTGGILLPTTA 346
           F +L       RSFRGLVVKAATVVAPKYTS+KPLGDRVLVKIK  EEK+ GGILLPTTA
Sbjct: 34  FGTLKPGAVTSRSFRGLVVKAATVVAPKYTSVKPLGDRVLVKIKETEEKTEGGILLPTTA 93

Query: 347 QSKPQGG 367
           QSKPQGG
Sbjct: 94  QSKPQGG 100


>ref|NP_197572.1| chaperonin 20 [Arabidopsis thaliana] gi|30687936|ref|NP_851045.1|
           chaperonin 20 [Arabidopsis thaliana]
           gi|334187803|ref|NP_001190350.1| chaperonin 20
           [Arabidopsis thaliana] gi|297808145|ref|XP_002871956.1|
           hypothetical protein ARALYDRAFT_488978 [Arabidopsis
           lyrata subsp. lyrata]
           gi|12643263|sp|O65282.2|CH10C_ARATH RecName: Full=20 kDa
           chaperonin, chloroplastic; AltName: Full=Chaperonin 10;
           Short=Ch-CPN10; Short=Cpn10; AltName: Full=Chaperonin
           20; AltName: Full=Protein Cpn21; Flags: Precursor
           gi|10179872|gb|AAG13931.1|AF268068_1 chaperonin 10
           [Arabidopsis thaliana]
           gi|16226815|gb|AAL16269.1|AF428339_1 AT5g20720/T1M15_120
           [Arabidopsis thaliana]
           gi|16226911|gb|AAL16296.1|AF428366_1 AT5g20720/T1M15_120
           [Arabidopsis thaliana] gi|4127456|emb|CAA09368.1| Cpn21
           protein [Arabidopsis thaliana]
           gi|14334612|gb|AAK59484.1| putative chloroplast Cpn21
           protein [Arabidopsis thaliana]
           gi|14587373|dbj|BAB61619.1| chaperonin 20 [Arabidopsis
           thaliana] gi|17065646|gb|AAL33817.1| putative
           chloroplast Cpn21 protein [Arabidopsis thaliana]
           gi|297317793|gb|EFH48215.1| hypothetical protein
           ARALYDRAFT_488978 [Arabidopsis lyrata subsp. lyrata]
           gi|332005498|gb|AED92881.1| chaperonin 20 [Arabidopsis
           thaliana] gi|332005499|gb|AED92882.1| chaperonin 20
           [Arabidopsis thaliana] gi|332005500|gb|AED92883.1|
           chaperonin 20 [Arabidopsis thaliana]
          Length = 253

 Score =  103 bits (256), Expect = 2e-20
 Identities = 58/97 (59%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
 Frame = +2

Query: 80  MAAVQVSGSGIS-TPXXXXXXXXXXXXTARFSSLAISTNNKRSFRGLVVKAATVVAPKYT 256
           MAA Q++ S ++ +             + +FSSL   T  +  FR LVVKAA+VVAPKYT
Sbjct: 1   MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYT 60

Query: 257 SIKPLGDRVLVKIKTAEEKSTGGILLPTTAQSKPQGG 367
           SIKPLGDRVLVKIK AEEK+ GGILLP+TAQSKPQGG
Sbjct: 61  SIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGG 97


Top