BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00012064
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531375.1| RNA and export factor binding protein, putat...   171   7e-41
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   168   6e-40
ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Gly...   166   4e-39
ref|XP_003606654.1| THO complex subunit [Medicago truncatula] gi...   163   2e-38
ref|XP_003539690.1| PREDICTED: RNA and export factor-binding pro...   162   4e-38

>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223529035|gb|EEF31023.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 247

 Score =  171 bits (434), Expect = 7e-41
 Identities = 96/158 (60%), Positives = 104/158 (65%)
 Frame = +3

Query: 3   EDIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRSDAAAAVKRYNNVQLDGKPMKIE 182
           EDIKELFSEVGDLKR+ +HYDRSGRSKGTAEVVFSRR+DA AAVKRYNNVQLDGKPMKIE
Sbjct: 105 EDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIE 164

Query: 183 IVGTNVVSPAALPLLANGIFGAPNGVPRGGQPRARASTRLXXXXXXXXXXXXXXXXXXXX 362
           IVGTN+ +PAA P  ANG FG  NG PRGGQ R     R                     
Sbjct: 165 IVGTNIATPAATP-AANGNFGNSNGAPRGGQGRGGTMRR--------------PRGASSD 209

Query: 363 XXXXXXXXXXXXXXEPEVSAQDLDADLEKYHSESMQIN 476
                           +VSA+DLDADLEKYHSE+MQ N
Sbjct: 210 GRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQTN 247


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  168 bits (426), Expect = 6e-40
 Identities = 93/158 (58%), Positives = 103/158 (65%)
 Frame = +3

Query: 3   EDIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRSDAAAAVKRYNNVQLDGKPMKIE 182
           EDIKELFSEVGDLKR+ +HYDRSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIE
Sbjct: 101 EDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIE 160

Query: 183 IVGTNVVSPAALPLLANGIFGAPNGVPRGGQPRARASTRLXXXXXXXXXXXXXXXXXXXX 362
           IVGTN+ +PAA+P + NG FG  NG  R  Q R  +  R                     
Sbjct: 161 IVGTNIATPAAVPPVTNGTFGNSNGGLRSAQGRVGSQGR---------------PRGGSG 205

Query: 363 XXXXXXXXXXXXXXEPEVSAQDLDADLEKYHSESMQIN 476
                           +VSA+DLDADLEKYHSE+MQIN
Sbjct: 206 GRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQIN 243


>ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Glycine max]
          Length = 243

 Score =  166 bits (419), Expect = 4e-39
 Identities = 91/158 (57%), Positives = 106/158 (67%)
 Frame = +3

Query: 3   EDIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRSDAAAAVKRYNNVQLDGKPMKIE 182
           +DIKELF EVGD+KRH VHYDRSGRSKGTAEVVFSRR+DA AAVKRYNNVQLDGKPMK+E
Sbjct: 100 DDIKELFLEVGDVKRHTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVE 159

Query: 183 IVGTNVVSPAALPLLANGIFGAPNGVPRGGQPRARASTRLXXXXXXXXXXXXXXXXXXXX 362
           IVGTN+ + AA P + NG FG P GVPR GQ R+ +  R                     
Sbjct: 160 IVGTNIATHAAPPAV-NGTFGNPTGVPRSGQGRSGSLGR-------------PRGGSRGR 205

Query: 363 XXXXXXXXXXXXXXEPEVSAQDLDADLEKYHSESMQIN 476
                         + +VSA+DLDADLEKYH+E+MQ+N
Sbjct: 206 GSIQRGRGRGRGGRDEKVSAEDLDADLEKYHAEAMQLN 243


>ref|XP_003606654.1| THO complex subunit [Medicago truncatula]
           gi|355507709|gb|AES88851.1| THO complex subunit
           [Medicago truncatula]
          Length = 376

 Score =  163 bits (413), Expect = 2e-38
 Identities = 90/158 (56%), Positives = 104/158 (65%)
 Frame = +3

Query: 3   EDIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRSDAAAAVKRYNNVQLDGKPMKIE 182
           +DIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIE
Sbjct: 221 DDIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIE 280

Query: 183 IVGTNVVSPAALPLLANGIFGAPNGVPRGGQPRARASTRLXXXXXXXXXXXXXXXXXXXX 362
           IVGTN+ +P A P++ N   G  NG+P+ GQ R     R                     
Sbjct: 281 IVGTNISTPGAAPVV-NAPIGNFNGIPQSGQGRV-GEFRGPGGRGQGIRRNRGRGRGSGG 338

Query: 363 XXXXXXXXXXXXXXEPEVSAQDLDADLEKYHSESMQIN 476
                         + +VSA+DLDA+LEKYH+E+MQ+N
Sbjct: 339 PRGGGRGGGRGRGRDDKVSAEDLDAELEKYHAEAMQLN 376


>ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
           max]
          Length = 247

 Score =  162 bits (410), Expect = 4e-38
 Identities = 91/158 (57%), Positives = 101/158 (63%)
 Frame = +3

Query: 3   EDIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRSDAAAAVKRYNNVQLDGKPMKIE 182
           +DIKELF+EVGDLKRH VHYDRSGRSKGTAEVVFSRR+DA +AVKRYNNVQLDGKPMKIE
Sbjct: 103 DDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIE 162

Query: 183 IVGTNVVSPAALPLLANGIFGAPNGVPRGGQPRARASTRLXXXXXXXXXXXXXXXXXXXX 362
           IVGTN+ +P   P   NG  G  NGVPR GQ R  A  R                     
Sbjct: 163 IVGTNISTPGVAP-APNGAIGNFNGVPRSGQGRGGALRR------------PGGRGQGIR 209

Query: 363 XXXXXXXXXXXXXXEPEVSAQDLDADLEKYHSESMQIN 476
                           +VSA DLDADLEKYH+E+MQ+N
Sbjct: 210 RDRGRGRGRGGGGRGEKVSADDLDADLEKYHAEAMQLN 247