BLASTX nr result

ID: Aconitum21_contig00011984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00011984
         (1378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16624.3| unnamed protein product [Vitis vinifera]              341   2e-91
ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265...   341   2e-91
ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|2...   333   5e-89
ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sa...   323   5e-86
ref|XP_002511630.1| structural constituent of nuclear pore, puta...   322   1e-85

>emb|CBI16624.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  341 bits (875), Expect = 2e-91
 Identities = 189/261 (72%), Positives = 208/261 (79%), Gaps = 1/261 (0%)
 Frame = -3

Query: 782  LSAKATAPASQSSALPQTSTATS-FGVPSTSAGASTDAAPKFNLXXXXXXXXXXXXXXXX 606
            L  K++APAS S A  QT+TA+  FGVP ++A A T ++                     
Sbjct: 535  LPTKSSAPASSSQA--QTTTASPLFGVPPSTAVAVTSSSTT----------AVQTSSSLV 582

Query: 605  XXXXXXXXXXXXXXXSPAPKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIAEWDK 426
                           +PAPK+PSEITGKTVEEIIKEWN+ELQERTGKFRKQA AIAEWDK
Sbjct: 583  VASSSGTNSTVTTAVAPAPKMPSEITGKTVEEIIKEWNTELQERTGKFRKQATAIAEWDK 642

Query: 425  RILQNRDVLLRLEIEVAKVVETQAILERQLELIETHQQEVDKSLQSIEEEAERIYKDERG 246
            +ILQNRDVLLRLEIEVAKVVETQA LERQLELIETHQQEVDK+L SIEEEAERIYKDERG
Sbjct: 643  KILQNRDVLLRLEIEVAKVVETQAQLERQLELIETHQQEVDKALLSIEEEAERIYKDERG 702

Query: 245  LLLEDEAASTRDAMYEQAEFIEREMEQMTEQIKSIIQTLNSNQGGDLDAIDGMTPLDVVV 66
            LLL+DEAASTRDAMYEQAEFIEREMEQMTEQIKSIIQTLN+NQGG+LD +DGMTPLDV+V
Sbjct: 703  LLLDDEAASTRDAMYEQAEFIEREMEQMTEQIKSIIQTLNTNQGGELDVMDGMTPLDVIV 762

Query: 65   RILNNQLSSLMWIDEKAGEFS 3
            RILNNQLSSLMWIDEKA EF+
Sbjct: 763  RILNNQLSSLMWIDEKAQEFN 783


>ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265039 [Vitis vinifera]
          Length = 775

 Score =  341 bits (875), Expect = 2e-91
 Identities = 189/261 (72%), Positives = 208/261 (79%), Gaps = 1/261 (0%)
 Frame = -3

Query: 782  LSAKATAPASQSSALPQTSTATS-FGVPSTSAGASTDAAPKFNLXXXXXXXXXXXXXXXX 606
            L  K++APAS S A  QT+TA+  FGVP ++A A T ++                     
Sbjct: 502  LPTKSSAPASSSQA--QTTTASPLFGVPPSTAVAVTSSSTT----------AVQTSSSLV 549

Query: 605  XXXXXXXXXXXXXXXSPAPKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIAEWDK 426
                           +PAPK+PSEITGKTVEEIIKEWN+ELQERTGKFRKQA AIAEWDK
Sbjct: 550  VASSSGTNSTVTTAVAPAPKMPSEITGKTVEEIIKEWNTELQERTGKFRKQATAIAEWDK 609

Query: 425  RILQNRDVLLRLEIEVAKVVETQAILERQLELIETHQQEVDKSLQSIEEEAERIYKDERG 246
            +ILQNRDVLLRLEIEVAKVVETQA LERQLELIETHQQEVDK+L SIEEEAERIYKDERG
Sbjct: 610  KILQNRDVLLRLEIEVAKVVETQAQLERQLELIETHQQEVDKALLSIEEEAERIYKDERG 669

Query: 245  LLLEDEAASTRDAMYEQAEFIEREMEQMTEQIKSIIQTLNSNQGGDLDAIDGMTPLDVVV 66
            LLL+DEAASTRDAMYEQAEFIEREMEQMTEQIKSIIQTLN+NQGG+LD +DGMTPLDV+V
Sbjct: 670  LLLDDEAASTRDAMYEQAEFIEREMEQMTEQIKSIIQTLNTNQGGELDVMDGMTPLDVIV 729

Query: 65   RILNNQLSSLMWIDEKAGEFS 3
            RILNNQLSSLMWIDEKA EF+
Sbjct: 730  RILNNQLSSLMWIDEKAQEFN 750


>ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|222835317|gb|EEE73752.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  333 bits (855), Expect = 5e-89
 Identities = 171/183 (93%), Positives = 179/183 (97%)
 Frame = -3

Query: 551 PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIAEWDKRILQNRDVLLRLEIEVAK 372
           PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQA AIAEWDKRILQNRDVLLRLEIEVAK
Sbjct: 37  PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQATAIAEWDKRILQNRDVLLRLEIEVAK 96

Query: 371 VVETQAILERQLELIETHQQEVDKSLQSIEEEAERIYKDERGLLLEDEAASTRDAMYEQA 192
           VVETQA LER+LELIETHQQEVDK+LQSIEEEAERIYKDERG LL+DEAASTRDAMYEQA
Sbjct: 97  VVETQANLERKLELIETHQQEVDKALQSIEEEAERIYKDERGSLLDDEAASTRDAMYEQA 156

Query: 191 EFIEREMEQMTEQIKSIIQTLNSNQGGDLDAIDGMTPLDVVVRILNNQLSSLMWIDEKAG 12
           EFIEREMEQMTEQIKS+IQT+N+NQGG+LDAIDGMTPLD+VVRILNNQLSSLMWIDEKA 
Sbjct: 157 EFIEREMEQMTEQIKSVIQTVNANQGGELDAIDGMTPLDMVVRILNNQLSSLMWIDEKAE 216

Query: 11  EFS 3
           EFS
Sbjct: 217 EFS 219


>ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sativus]
          Length = 757

 Score =  323 bits (829), Expect = 5e-86
 Identities = 163/183 (89%), Positives = 177/183 (96%)
 Frame = -3

Query: 551  PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIAEWDKRILQNRDVLLRLEIEVAK 372
            PKLPSEITGKTVEEIIKEWN+ELQERTGKFRKQA AIAEWD+RI+QNRD+LLRLEIEVAK
Sbjct: 549  PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAK 608

Query: 371  VVETQAILERQLELIETHQQEVDKSLQSIEEEAERIYKDERGLLLEDEAASTRDAMYEQA 192
            VVETQA LE++LELIETHQQEVDK+L S+EE+AERIYKDERGLLL+DEAASTRDAMYEQA
Sbjct: 609  VVETQAELEKKLELIETHQQEVDKALVSVEEDAERIYKDERGLLLDDEAASTRDAMYEQA 668

Query: 191  EFIEREMEQMTEQIKSIIQTLNSNQGGDLDAIDGMTPLDVVVRILNNQLSSLMWIDEKAG 12
            E+IERE+EQMTEQIKSIIQTLN+NQGG+LD IDGMTPLD VVRILNNQLSSLMWIDEKA 
Sbjct: 669  EYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAE 728

Query: 11   EFS 3
            EFS
Sbjct: 729  EFS 731


>ref|XP_002511630.1| structural constituent of nuclear pore, putative [Ricinus communis]
            gi|223548810|gb|EEF50299.1| structural constituent of
            nuclear pore, putative [Ricinus communis]
          Length = 811

 Score =  322 bits (825), Expect = 1e-85
 Identities = 178/269 (66%), Positives = 200/269 (74%), Gaps = 10/269 (3%)
 Frame = -3

Query: 779  SAKATAPASQSSALPQTSTATSFGVPSTSAGASTDA----------APKFNLXXXXXXXX 630
            +AK + P S +S    T++A+ F V +T++ A T A          A   +         
Sbjct: 518  TAKISTPPSSTSQSQSTTSASLFNVTATTSAAPTTAISSTTAPHSLAVASSSGFILLLMN 577

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXSPAPKLPSEITGKTVEEIIKEWNSELQERTGKFRKQA 450
                                   S  PKLPSEITGKTVEEIIKEWN+ELQERTGKFRKQA
Sbjct: 578  FASGSCMSCIFPSLTNSSVSAAVSATPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQA 637

Query: 449  IAIAEWDKRILQNRDVLLRLEIEVAKVVETQAILERQLELIETHQQEVDKSLQSIEEEAE 270
             AIAEWDKRIL NRDVLLRLEIEVAKVVETQA LERQLELIETHQQEVDK++QS+EEEAE
Sbjct: 638  AAIAEWDKRILHNRDVLLRLEIEVAKVVETQANLERQLELIETHQQEVDKAVQSMEEEAE 697

Query: 269  RIYKDERGLLLEDEAASTRDAMYEQAEFIEREMEQMTEQIKSIIQTLNSNQGGDLDAIDG 90
            RIYKDERGLLL+DEAASTRDAMYEQAE +ERE+EQMT+QIKS+I TLN++QGG+LD ID 
Sbjct: 698  RIYKDERGLLLDDEAASTRDAMYEQAELVERELEQMTQQIKSVIDTLNASQGGELDTIDR 757

Query: 89   MTPLDVVVRILNNQLSSLMWIDEKAGEFS 3
            MTPLDVVVRILNNQLSSLMWIDEKA EFS
Sbjct: 758  MTPLDVVVRILNNQLSSLMWIDEKAEEFS 786


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