BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00011912
         (1238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276909.1| PREDICTED: exosome complex exonuclease RRP44...   548   e-154
ref|XP_002276939.1| PREDICTED: exosome complex exonuclease RRP44...   548   e-154
ref|XP_003523275.1| PREDICTED: exosome complex exonuclease RRP44...   529   e-148
ref|XP_003539576.1| PREDICTED: exosome complex exonuclease RRP44...   521   e-145
ref|XP_003526807.1| PREDICTED: exosome complex exonuclease RRP44...   519   e-145

>ref|XP_002276909.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Vitis
            vinifera]
          Length = 899

 Score =  548 bits (1413), Expect = e-154
 Identities = 276/360 (76%), Positives = 296/360 (82%)
 Frame = +3

Query: 159  MLQSKSFVRKTKQGKVLKVVREHYLRDDIYCGASICKVCDXXXXXXXXXXXTILIVDTNV 338
            MLQSKSFVRKTKQGKV+KVVREHYLRDDIYCGASICKVCD           TILI+DTNV
Sbjct: 1    MLQSKSFVRKTKQGKVVKVVREHYLRDDIYCGASICKVCDSSTARLSPSASTILILDTNV 60

Query: 339  VLNQIDLLENPAIXXXXXXXXXXXXXKNKNISVYNRLRALCSNSLRKFFVFSNEHHKDTY 518
            VLNQIDLLENPAI             KNKNISVYNRLR LCSNS+RKFFVFSNE+HKDTY
Sbjct: 61   VLNQIDLLENPAIDDVVVLSVVLEEVKNKNISVYNRLRTLCSNSMRKFFVFSNEYHKDTY 120

Query: 519  VKAMVGETPNDRNDRAIRVATHWYQRHLLGSTRVLLITNDKDNKRKANDEGISAETVESY 698
            VK M GE+PNDRNDRAIRVAT WYQ HL  + RVLLITND++NKRKA +EGISAETVESY
Sbjct: 121  VKQMAGESPNDRNDRAIRVATQWYQSHLGAAARVLLITNDRENKRKATEEGISAETVESY 180

Query: 699  VKSLGQPDLLDLVVHPTSEDVNMEDVEDLRPSKRKVIYSEHKPMSEITSGLHRGTYHQGK 878
            VK+LGQP LLDL+V P  EDV ME+VEDLRPSKRKVIYSEHKPMSEITSGLHRG YHQGK
Sbjct: 181  VKALGQPGLLDLLVQPAPEDVGMEEVEDLRPSKRKVIYSEHKPMSEITSGLHRGIYHQGK 240

Query: 879  LRVNRYNPFEAYVGSESIGDEIIIHGRANMNRAFDGDVVAVELLPKEQWHGGNSLSIAXX 1058
            LRVNRYNPFEAYVGSESIGDEIII+GR NMNRAFDGDVVAVELLP++QW    SLSIA  
Sbjct: 241  LRVNRYNPFEAYVGSESIGDEIIIYGRGNMNRAFDGDVVAVELLPQDQWQEEKSLSIADE 300

Query: 1059 XXXXXXXVHLVPNSADDAPRNTTVVENSTANATSVPGRPAGRVVGIIKRNWQSYCGSLEP 1238
                   VHLVP+SADDAPRNT + + S     +V  RP+GRVVGIIKRNW SYCGSLEP
Sbjct: 301  EDEEEEDVHLVPSSADDAPRNTDLAQGSVGGTKAVLCRPSGRVVGIIKRNWHSYCGSLEP 360


>ref|XP_002276939.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Vitis
            vinifera] gi|296082564|emb|CBI21569.3| unnamed protein
            product [Vitis vinifera]
          Length = 937

 Score =  548 bits (1413), Expect = e-154
 Identities = 276/360 (76%), Positives = 296/360 (82%)
 Frame = +3

Query: 159  MLQSKSFVRKTKQGKVLKVVREHYLRDDIYCGASICKVCDXXXXXXXXXXXTILIVDTNV 338
            MLQSKSFVRKTKQGKV+KVVREHYLRDDIYCGASICKVCD           TILI+DTNV
Sbjct: 1    MLQSKSFVRKTKQGKVVKVVREHYLRDDIYCGASICKVCDSSTARLSPSASTILILDTNV 60

Query: 339  VLNQIDLLENPAIXXXXXXXXXXXXXKNKNISVYNRLRALCSNSLRKFFVFSNEHHKDTY 518
            VLNQIDLLENPAI             KNKNISVYNRLR LCSNS+RKFFVFSNE+HKDTY
Sbjct: 61   VLNQIDLLENPAIDDVVVLSVVLEEVKNKNISVYNRLRTLCSNSMRKFFVFSNEYHKDTY 120

Query: 519  VKAMVGETPNDRNDRAIRVATHWYQRHLLGSTRVLLITNDKDNKRKANDEGISAETVESY 698
            VK M GE+PNDRNDRAIRVAT WYQ HL  + RVLLITND++NKRKA +EGISAETVESY
Sbjct: 121  VKQMAGESPNDRNDRAIRVATQWYQSHLGAAARVLLITNDRENKRKATEEGISAETVESY 180

Query: 699  VKSLGQPDLLDLVVHPTSEDVNMEDVEDLRPSKRKVIYSEHKPMSEITSGLHRGTYHQGK 878
            VK+LGQP LLDL+V P  EDV ME+VEDLRPSKRKVIYSEHKPMSEITSGLHRG YHQGK
Sbjct: 181  VKALGQPGLLDLLVQPAPEDVGMEEVEDLRPSKRKVIYSEHKPMSEITSGLHRGIYHQGK 240

Query: 879  LRVNRYNPFEAYVGSESIGDEIIIHGRANMNRAFDGDVVAVELLPKEQWHGGNSLSIAXX 1058
            LRVNRYNPFEAYVGSESIGDEIII+GR NMNRAFDGDVVAVELLP++QW    SLSIA  
Sbjct: 241  LRVNRYNPFEAYVGSESIGDEIIIYGRGNMNRAFDGDVVAVELLPQDQWQEEKSLSIADE 300

Query: 1059 XXXXXXXVHLVPNSADDAPRNTTVVENSTANATSVPGRPAGRVVGIIKRNWQSYCGSLEP 1238
                   VHLVP+SADDAPRNT + + S     +V  RP+GRVVGIIKRNW SYCGSLEP
Sbjct: 301  EDEEEEDVHLVPSSADDAPRNTDLAQGSVGGTKAVLCRPSGRVVGIIKRNWHSYCGSLEP 360


>ref|XP_003523275.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
          Length = 934

 Score =  529 bits (1362), Expect = e-148
 Identities = 262/360 (72%), Positives = 293/360 (81%)
 Frame = +3

Query: 159  MLQSKSFVRKTKQGKVLKVVREHYLRDDIYCGASICKVCDXXXXXXXXXXXTILIVDTNV 338
            ML +KSFV+KTK GKV+K VREHYLRDDIYCGA  C VCD            IL+VDTNV
Sbjct: 1    MLHNKSFVKKTKGGKVIKQVREHYLRDDIYCGAPFCTVCDSSSARLSASPSIILVVDTNV 60

Query: 339  VLNQIDLLENPAIXXXXXXXXXXXXXKNKNISVYNRLRALCSNSLRKFFVFSNEHHKDTY 518
            VLNQIDLLENPAI             KNKN+SVYNR+RA+CSNS+RKFFVFSNE+H+DTY
Sbjct: 61   VLNQIDLLENPAIDDVVVLSIVLEEVKNKNMSVYNRIRAICSNSMRKFFVFSNEYHRDTY 120

Query: 519  VKAMVGETPNDRNDRAIRVATHWYQRHLLGSTRVLLITNDKDNKRKANDEGISAETVESY 698
            +K M GET NDRNDRAIRVAT WYQ HL G+ +VLL+TNDK+NKRKA++EGI AETVESY
Sbjct: 121  IKEMSGETKNDRNDRAIRVATQWYQNHLGGAVKVLLLTNDKENKRKASEEGILAETVESY 180

Query: 699  VKSLGQPDLLDLVVHPTSEDVNMEDVEDLRPSKRKVIYSEHKPMSEITSGLHRGTYHQGK 878
            VKSL QPDLLDL+V P SEDV+ME+VEDLRPSKRKVIYSEHKPMSEITSGLHRG YHQGK
Sbjct: 181  VKSLDQPDLLDLLVRPASEDVDMEEVEDLRPSKRKVIYSEHKPMSEITSGLHRGIYHQGK 240

Query: 879  LRVNRYNPFEAYVGSESIGDEIIIHGRANMNRAFDGDVVAVELLPKEQWHGGNSLSIAXX 1058
            LRVNRYNPFEAYVGSESIGDEIII+GR+NMNRAFDGD+VA ELLP++QW G +SLSIA  
Sbjct: 241  LRVNRYNPFEAYVGSESIGDEIIIYGRSNMNRAFDGDIVAAELLPQDQWQGVSSLSIAHE 300

Query: 1059 XXXXXXXVHLVPNSADDAPRNTTVVENSTANATSVPGRPAGRVVGIIKRNWQSYCGSLEP 1238
                   VHL PNSADDAPR T   + S+    +VP RP+GR+VGIIKRNW SYCGSLEP
Sbjct: 301  DEDEDEDVHLAPNSADDAPR-TISQQGSSEQVNAVPSRPSGRIVGIIKRNWHSYCGSLEP 359


>ref|XP_003539576.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
          Length = 439

 Score =  521 bits (1341), Expect = e-145
 Identities = 261/361 (72%), Positives = 292/361 (80%), Gaps = 1/361 (0%)
 Frame = +3

Query: 159  MLQSKSFVRKTKQGKVLKV-VREHYLRDDIYCGASICKVCDXXXXXXXXXXXTILIVDTN 335
            ML +KSFV+KTK GKV+K  VREHYLRDDIYCGA  C VCD           TIL VDTN
Sbjct: 1    MLHNKSFVKKTKGGKVIKYQVREHYLRDDIYCGAPFCTVCDSSSARLSASPSTILFVDTN 60

Query: 336  VVLNQIDLLENPAIXXXXXXXXXXXXXKNKNISVYNRLRALCSNSLRKFFVFSNEHHKDT 515
            VVLNQIDLLENPAI             KNKN+SVYNR+RA+CS+S+RKFFVFSNE+H+DT
Sbjct: 61   VVLNQIDLLENPAIDDVVVLSIVLEEVKNKNMSVYNRIRAICSHSMRKFFVFSNEYHRDT 120

Query: 516  YVKAMVGETPNDRNDRAIRVATHWYQRHLLGSTRVLLITNDKDNKRKANDEGISAETVES 695
            Y+K M GET NDRNDRAIRVAT WYQ HL G+ +VLLITND++NKRKA++EGI AETVES
Sbjct: 121  YIKEMSGETKNDRNDRAIRVATQWYQNHLGGAVKVLLITNDQENKRKASEEGILAETVES 180

Query: 696  YVKSLGQPDLLDLVVHPTSEDVNMEDVEDLRPSKRKVIYSEHKPMSEITSGLHRGTYHQG 875
            YVKSL QPDLLDL+V P SEDV+ME+VEDLRPSKRKVIYSEHKPMSEITSGLHRG YHQG
Sbjct: 181  YVKSLDQPDLLDLLVRPASEDVDMEEVEDLRPSKRKVIYSEHKPMSEITSGLHRGIYHQG 240

Query: 876  KLRVNRYNPFEAYVGSESIGDEIIIHGRANMNRAFDGDVVAVELLPKEQWHGGNSLSIAX 1055
            KLRVNRYNPFEAYVGSESIGDEIII+GR+NMNRAFDGD+ A ELLP++QW G +SLSIA 
Sbjct: 241  KLRVNRYNPFEAYVGSESIGDEIIIYGRSNMNRAFDGDIEAAELLPQDQWQGVSSLSIAH 300

Query: 1056 XXXXXXXXVHLVPNSADDAPRNTTVVENSTANATSVPGRPAGRVVGIIKRNWQSYCGSLE 1235
                    VHL PNSADDAPR T   + S+    +VP RP+GR+VGIIKRNW SYCGSLE
Sbjct: 301  EDEDEDEDVHLAPNSADDAPR-TIPQQGSSEQVNAVPSRPSGRIVGIIKRNWHSYCGSLE 359

Query: 1236 P 1238
            P
Sbjct: 360  P 360


>ref|XP_003526807.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
          Length = 934

 Score =  519 bits (1337), Expect = e-145
 Identities = 260/361 (72%), Positives = 292/361 (80%), Gaps = 1/361 (0%)
 Frame = +3

Query: 159  MLQSKSFVRKTKQGKVLKVVREHYLRDDIYCGASICKVCDXXXXXXXXXXXTILIVDTNV 338
            ML +KSFV+KTK GKV+K VREHYLRDDIYCGA  C VCD           TIL+VDTNV
Sbjct: 1    MLHNKSFVKKTKGGKVMKQVREHYLRDDIYCGAPFCTVCDSSGARLSASPSTILVVDTNV 60

Query: 339  VLNQIDLLENPAIXXXXXXXXXXXXXKNKNISVYNRLRALCSNSLRKFFVFSNEHHKDTY 518
            VLNQIDLLENPAI             KNKN+SVYNR+RA+CSNS+RKFFVFSNE+H+DTY
Sbjct: 61   VLNQIDLLENPAIDDVVVLSIVLEEVKNKNMSVYNRIRAICSNSMRKFFVFSNEYHRDTY 120

Query: 519  VKAMVGETPNDRNDRAIRVATHWYQRHLLGSTRVLLITNDKDNKRKANDEGISAETVESY 698
            +K M GET NDRNDRAIRVAT WYQ HL G+ +VLLITNDK+NKRKA++EGI AETVESY
Sbjct: 121  IKEMSGETKNDRNDRAIRVATQWYQNHLGGAVKVLLITNDKENKRKASEEGILAETVESY 180

Query: 699  VKSLGQPDLLDLVVHPTSEDVNMEDVEDLRPSKRKVIYSEHKPMSEITSGLHRGTYHQGK 878
            VKSL +PDLLDL+V P SEDV+ME+VEDLRPSKRKVIYSEHKPMSEITSGLHRG YHQGK
Sbjct: 181  VKSLVRPDLLDLLVRPASEDVDMEEVEDLRPSKRKVIYSEHKPMSEITSGLHRGIYHQGK 240

Query: 879  LRVNRYNPFEAYVGSESIGDEIIIHGRANMNRAFDGDVVAVELLPKEQWHGGNSLSIA-X 1055
            LRVNRYNPFEAYVGSESIGDEI+I+GR+ MNRAFDGD+VA ELLP++QW G +SLSIA  
Sbjct: 241  LRVNRYNPFEAYVGSESIGDEIVIYGRSIMNRAFDGDIVAAELLPQDQWQGVSSLSIAHE 300

Query: 1056 XXXXXXXXVHLVPNSADDAPRNTTVVENSTANATSVPGRPAGRVVGIIKRNWQSYCGSLE 1235
                    VHL PNSADDAPR  +  + S+    +VP RP GR+VGIIKRNW SYCGSLE
Sbjct: 301  EDEDENEDVHLAPNSADDAPRAVS-QQGSSEQLNAVPSRPCGRIVGIIKRNWHSYCGSLE 359

Query: 1236 P 1238
            P
Sbjct: 360  P 360