BLASTX nr result

ID: Aconitum21_contig00011719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00011719
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522724.1| 30S ribosomal protein S10, putative [Ricinus...   216   7e-54
ref|XP_002317356.1| predicted protein [Populus trichocarpa] gi|2...   211   2e-52
gb|ABL97980.1| 30S ribosomal protein S10-like [Brassica rapa]         211   2e-52
ref|XP_004150471.1| PREDICTED: 30S ribosomal protein S10, chloro...   210   4e-52
sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, ...   210   4e-52

>ref|XP_002522724.1| 30S ribosomal protein S10, putative [Ricinus communis]
           gi|223537962|gb|EEF39575.1| 30S ribosomal protein S10,
           putative [Ricinus communis]
          Length = 208

 Score =  216 bits (549), Expect = 7e-54
 Identities = 108/141 (76%), Positives = 120/141 (85%), Gaps = 6/141 (4%)
 Frame = +1

Query: 208 AAPEPPLETLDGPS----QVGESEDFNP--IVADAEVEKMAPKQKIRIKLRSYWTPLIED 369
           A  +PPLET D P     Q+G+SE  +   I   A+ +K+APKQKIRIKLRSYW PLIED
Sbjct: 67  ATLDPPLETTDEPDSDSFQIGDSETSSSPSISIAADADKLAPKQKIRIKLRSYWVPLIED 126

Query: 370 SCKQIMDVARTSNAKTVGPVPLPTKKRVYCVLKSPHVHKDARFHFEIRTHQRLIDIIHPT 549
           SCKQIMD AR +NAKT+GPVPLPTKKR+YCVLKSPHVHKDARFHFEIRTHQRLIDI++PT
Sbjct: 127 SCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPT 186

Query: 550 AQTIDSLMQLDLPAGVDVEVK 612
           AQTIDSLMQLDLPAGVDVEVK
Sbjct: 187 AQTIDSLMQLDLPAGVDVEVK 207


>ref|XP_002317356.1| predicted protein [Populus trichocarpa] gi|222860421|gb|EEE97968.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  211 bits (537), Expect = 2e-52
 Identities = 111/151 (73%), Positives = 121/151 (80%), Gaps = 15/151 (9%)
 Frame = +1

Query: 205 FAAPE---------PPLETLDGPS----QVGESE--DFNPIVADAEVEKMAPKQKIRIKL 339
           FAAPE         P  +TLDGP     QVG+SE      +   A+ + MAPKQKIRIKL
Sbjct: 54  FAAPEALDSQTTLDPLPDTLDGPESDTFQVGDSETPSHQSVSIAADADMMAPKQKIRIKL 113

Query: 340 RSYWTPLIEDSCKQIMDVARTSNAKTVGPVPLPTKKRVYCVLKSPHVHKDARFHFEIRTH 519
           RS+W  LIEDSCKQIMD ART+NAKT+GPVPLPTKKRVYCVLKSPHVHKDARFHFEIRTH
Sbjct: 114 RSFWVKLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRVYCVLKSPHVHKDARFHFEIRTH 173

Query: 520 QRLIDIIHPTAQTIDSLMQLDLPAGVDVEVK 612
           QRLIDI++PTAQTIDSLMQLDLPAGVDVEVK
Sbjct: 174 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVK 204


>gb|ABL97980.1| 30S ribosomal protein S10-like [Brassica rapa]
          Length = 193

 Score =  211 bits (536), Expect = 2e-52
 Identities = 107/144 (74%), Positives = 121/144 (84%), Gaps = 5/144 (3%)
 Frame = +1

Query: 196 TTTFAAPEPPL-ETLDGPSQVGESEDFNPIVADAEV----EKMAPKQKIRIKLRSYWTPL 360
           T  FAAPE    ETLD P+    SE+F  + + + +    +KMAPKQKIRIKLRSYW PL
Sbjct: 53  TKVFAAPETLTPETLDEPT----SEEFAEVPSSSSISVDADKMAPKQKIRIKLRSYWVPL 108

Query: 361 IEDSCKQIMDVARTSNAKTVGPVPLPTKKRVYCVLKSPHVHKDARFHFEIRTHQRLIDII 540
           IEDSCKQI+D AR +NAKT+GPVPLPTKKR+YCVLKSPHVHKDARFHFEIRTHQR+IDI+
Sbjct: 109 IEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDIL 168

Query: 541 HPTAQTIDSLMQLDLPAGVDVEVK 612
           +PTAQTIDSLMQLDLPAGVDVEVK
Sbjct: 169 YPTAQTIDSLMQLDLPAGVDVEVK 192


>ref|XP_004150471.1| PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Cucumis
           sativus] gi|449519589|ref|XP_004166817.1| PREDICTED: 30S
           ribosomal protein S10, chloroplastic-like [Cucumis
           sativus]
          Length = 206

 Score =  210 bits (534), Expect = 4e-52
 Identities = 109/154 (70%), Positives = 121/154 (78%), Gaps = 15/154 (9%)
 Frame = +1

Query: 196 TTTFAAPE---------PPLETLDGPS-QVGESEDF-----NPIVADAEVEKMAPKQKIR 330
           T  +AAPE         PP E L+G      E EDF     + +    +V+K+APKQKIR
Sbjct: 52  TRLYAAPEVLDSPDTIEPPPEILEGSGVSTLEGEDFEVPGTSALSIGEDVDKLAPKQKIR 111

Query: 331 IKLRSYWTPLIEDSCKQIMDVARTSNAKTVGPVPLPTKKRVYCVLKSPHVHKDARFHFEI 510
           IKLRSYW PLIEDSCKQIMD AR +NAKT+GPVPLPTKKR+YCVLKSPHVHKDARFHFEI
Sbjct: 112 IKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEI 171

Query: 511 RTHQRLIDIIHPTAQTIDSLMQLDLPAGVDVEVK 612
           RTHQRLIDI++PTAQTIDSLMQLDLPAGVDVEVK
Sbjct: 172 RTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVK 205


>sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, chloroplastic; Flags:
           Precursor gi|188036211|pdb|3BBN|J Chain J, Homology
           Model For The Spinach Chloroplast 30s Subunit Fitted To
           9.4a Cryo-Em Map Of The 70s Chlororibosome.
           gi|7578929|gb|AAF64190.1|AF245665_1 plastid ribosomal
           protein S10 precursor [Mesembryanthemum crystallinum]
          Length = 197

 Score =  210 bits (534), Expect = 4e-52
 Identities = 105/137 (76%), Positives = 117/137 (85%), Gaps = 1/137 (0%)
 Frame = +1

Query: 205 FAAPEPPLETLDGP-SQVGESEDFNPIVADAEVEKMAPKQKIRIKLRSYWTPLIEDSCKQ 381
           FAAPE       GP S V E  + + +   A+ ++MAPKQKIRIKLRSYW PLIEDSCKQ
Sbjct: 60  FAAPEVLESQETGPESYVEEGSETSALGIGADSDQMAPKQKIRIKLRSYWVPLIEDSCKQ 119

Query: 382 IMDVARTSNAKTVGPVPLPTKKRVYCVLKSPHVHKDARFHFEIRTHQRLIDIIHPTAQTI 561
           IMD ART+NAKT+GPVPLPTKKR++CVLKSPHVHKDARFHFEIRTHQRLIDI++PTAQTI
Sbjct: 120 IMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTI 179

Query: 562 DSLMQLDLPAGVDVEVK 612
           DSLMQLDLPAGVDVEVK
Sbjct: 180 DSLMQLDLPAGVDVEVK 196


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