BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00011703
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   600   e-169
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   598   e-169
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   593   e-167
ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|2...   588   e-165
ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [V...   579   e-163

>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis vinifera]
            gi|302141781|emb|CBI18984.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  600 bits (1547), Expect = e-169
 Identities = 301/340 (88%), Positives = 322/340 (94%)
 Frame = -1

Query: 1099 MAPVLQSTQPWVEKYRPRQVKDVAHQDEVIRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 920
            MAPVLQS+QPWVEKYRP+QVKDVAHQDEV+RVLTNTLETTNCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 919  AIAHQLFGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGTRGHQGGYPCPPYKIII 740
            AIAHQLFGPELYKSRVLELNASD+RGINVVRTKIKDFAAVAVG+   QGGYPCPPYKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 120

Query: 739  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEDIMT 560
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL+E+IM+
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 559  TRILHICNEEGINLDSEALSTLSSISQGDLRRAITHLQGAARLFGSNISAKELISVSGVI 380
            +RILHIC EE +NLDSEALSTLSSISQGDLRRAIT+LQGAARLFGS IS+K+LISVSGV+
Sbjct: 181  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240

Query: 379  PGAIVQALLAACKSGDFDLANKEVNNVIAEGYPVSQMLSQLLEVVAEANDITDEQKAKIC 200
            P  +VQAL AACKSGDFD ANKEVNNVIAEGYPVSQML QL +VV EA DI+DEQKA+IC
Sbjct: 241  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARIC 299

Query: 199  SKLGEADKCLIDGADEYLQLLDVASNAMRALCNMP*EFSY 80
             +L EADKCL+DGADEYLQLLDVASNAMRALCNMP EF +
Sbjct: 300  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPH 339


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  598 bits (1542), Expect = e-169
 Identities = 300/340 (88%), Positives = 321/340 (94%)
 Frame = -1

Query: 1099 MAPVLQSTQPWVEKYRPRQVKDVAHQDEVIRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 920
            MAPVLQS+QPWVEKYRP+QVKDVAHQDEV+RVLTNTLETTNCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 919  AIAHQLFGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGTRGHQGGYPCPPYKIII 740
            AIAHQLFGPELYKSRVLELNASD+RGINVVRTKIKDFA VAVG+   QGGYPCPPYKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGGYPCPPYKIII 120

Query: 739  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEDIMT 560
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL+E+IM+
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 559  TRILHICNEEGINLDSEALSTLSSISQGDLRRAITHLQGAARLFGSNISAKELISVSGVI 380
            +RILHIC EE +NLDSEALSTLSSISQGDLRRAIT+LQGAARLFGS IS+K+LISVSGV+
Sbjct: 181  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240

Query: 379  PGAIVQALLAACKSGDFDLANKEVNNVIAEGYPVSQMLSQLLEVVAEANDITDEQKAKIC 200
            P  +VQAL AACKSGDFD ANKEVNNVIAEGYPVSQML QL +VV EA DI+DEQKA+IC
Sbjct: 241  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARIC 299

Query: 199  SKLGEADKCLIDGADEYLQLLDVASNAMRALCNMP*EFSY 80
             +L EADKCL+DGADEYLQLLDVASNAMRALCNMP EF +
Sbjct: 300  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPH 339


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223540549|gb|EEF42116.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 342

 Score =  593 bits (1530), Expect = e-167
 Identities = 291/340 (85%), Positives = 320/340 (94%)
 Frame = -1

Query: 1099 MAPVLQSTQPWVEKYRPRQVKDVAHQDEVIRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 920
            MAP+LQS+QPWVEKYRP+QVKDVAHQ+EV+RVLTNTLET+NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPILQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 919  AIAHQLFGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGTRGHQGGYPCPPYKIII 740
            AIAHQLFGPELYKSRVLELNASD+RGINVVRTKIK+FAAVAVG+    GGYPCPPYKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGGYPCPPYKIII 120

Query: 739  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEDIMT 560
            LDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL+E+IM+
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 559  TRILHICNEEGINLDSEALSTLSSISQGDLRRAITHLQGAARLFGSNISAKELISVSGVI 380
            +R+LHIC EEG+NLD+EALSTLS +SQGDLRRAIT+LQGAARL+GS IS+K+LISVSGVI
Sbjct: 181  SRVLHICREEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKDLISVSGVI 240

Query: 379  PGAIVQALLAACKSGDFDLANKEVNNVIAEGYPVSQMLSQLLEVVAEANDITDEQKAKIC 200
            P   V AL AAC+SGDFD+ANKEVNN+IAEGYPVSQML QLLEVV EA+DI+DEQKA+IC
Sbjct: 241  PQEAVGALYAACRSGDFDMANKEVNNIIAEGYPVSQMLVQLLEVVVEADDISDEQKAQIC 300

Query: 199  SKLGEADKCLIDGADEYLQLLDVASNAMRALCNMP*EFSY 80
              LG ADKCL+DGADEYLQLLDVASN MRALCNMP EF Y
Sbjct: 301  KSLGAADKCLVDGADEYLQLLDVASNTMRALCNMPQEFPY 340


>ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|222856905|gb|EEE94452.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  588 bits (1515), Expect = e-165
 Identities = 288/340 (84%), Positives = 316/340 (92%)
 Frame = -1

Query: 1099 MAPVLQSTQPWVEKYRPRQVKDVAHQDEVIRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 920
            MAP+LQS+Q WVEKYRP+Q+KDVAHQDEV+RVLTNTLET NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPLLQSSQQWVEKYRPKQIKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 919  AIAHQLFGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGTRGHQGGYPCPPYKIII 740
            AIAHQL+GPELYKSRVLELNASD+RGINVVRTKIKDFAAVAVG+   QG YPCPPYKIII
Sbjct: 61   AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII 120

Query: 739  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEDIMT 560
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL E+IM+
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMS 180

Query: 559  TRILHICNEEGINLDSEALSTLSSISQGDLRRAITHLQGAARLFGSNISAKELISVSGVI 380
             RILHICNEEG+ LD+EALSTLSS+SQGDLRRAIT+LQGAARLFGS+IS+K+LISVSG I
Sbjct: 181  NRILHICNEEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAI 240

Query: 379  PGAIVQALLAACKSGDFDLANKEVNNVIAEGYPVSQMLSQLLEVVAEANDITDEQKAKIC 200
            P  + +A+ AACK+GDFDLANKEVN+VIAEGYPVSQML+QL EVV E +DI+DEQKA+IC
Sbjct: 241  PREVTEAIYAACKNGDFDLANKEVNDVIAEGYPVSQMLAQLFEVVVEVDDISDEQKARIC 300

Query: 199  SKLGEADKCLIDGADEYLQLLDVASNAMRALCNMP*EFSY 80
              L  ADKCL+DGADEYLQLLDV SN MR+LCNMP EFSY
Sbjct: 301  KSLATADKCLVDGADEYLQLLDVVSNTMRSLCNMPQEFSY 340


>ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
          Length = 334

 Score =  579 bits (1492), Expect = e-163
 Identities = 294/340 (86%), Positives = 315/340 (92%)
 Frame = -1

Query: 1099 MAPVLQSTQPWVEKYRPRQVKDVAHQDEVIRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 920
            MAPVLQS+QPWVEKYRP+QVKDVAHQDEV+RVLTNTLETTNCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 919  AIAHQLFGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGTRGHQGGYPCPPYKIII 740
            AIAHQLFG       VLELNASD+RGINVVRTKIKDFAAVAVG+   QGGYPCPPYKIII
Sbjct: 61   AIAHQLFG-------VLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 113

Query: 739  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEDIMT 560
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL+E+IM+
Sbjct: 114  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 173

Query: 559  TRILHICNEEGINLDSEALSTLSSISQGDLRRAITHLQGAARLFGSNISAKELISVSGVI 380
            +RILHIC EE +NLDSEALSTLSSISQGDLRRAIT+LQGAARLFGS IS+K+LISVSGV+
Sbjct: 174  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 233

Query: 379  PGAIVQALLAACKSGDFDLANKEVNNVIAEGYPVSQMLSQLLEVVAEANDITDEQKAKIC 200
            P  +VQAL AACKSGDFD ANKEVNNVIAEGYPVSQML QL +VV EA DI+DEQKA+IC
Sbjct: 234  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARIC 292

Query: 199  SKLGEADKCLIDGADEYLQLLDVASNAMRALCNMP*EFSY 80
             +L EADKCL+DGADEYLQLLDVASNAMRALCNMP EF +
Sbjct: 293  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPH 332