BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00011661
         (1688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   566   e-159
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   538   e-150
ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-...   531   e-148
ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2...   513   e-143
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-...   504   e-140

>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  566 bits (1459), Expect = e-159
 Identities = 293/459 (63%), Positives = 358/459 (77%), Gaps = 9/459 (1%)
 Frame = -3

Query: 1686 LSVSGSTHLIELPSDVKVPLNWVKVNSTKKTIRYHPPEVLEALDELMLSKEELAIASRSA 1507
            +SVSG+THLIELP DVKVP NWVKVNSTKKT+RYHPPEVL ALD+L L+ EEL IA R A
Sbjct: 674  MSVSGTTHLIELPVDVKVPSNWVKVNSTKKTVRYHPPEVLSALDQLSLANEELMIACRGA 733

Query: 1506 WGHFLERFSDYYAEFQACVQALAALDCLHSFALISRNKNYIRPEFVDDSKSVQIHIRAGR 1327
            W  FL  F  Y++EFQA VQALA LDCLHS A++SRNKNY+RP FV DS+ VQ+HI +GR
Sbjct: 734  WDSFLRAFDKYFSEFQAAVQALATLDCLHSLAILSRNKNYVRPVFVGDSEPVQMHICSGR 793

Query: 1326 HPVLDLILQGSFVPNDTDLHADGEHCQIVTGPNMGGKSCYIRQVALLSIMAQVGSFVPAS 1147
            HPVL+ +LQ +FVPNDT+LHADGE+C+IVTGPNMGGKSCYIRQVAL++IMAQVGSFVPAS
Sbjct: 794  HPVLETVLQDNFVPNDTNLHADGEYCEIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPAS 853

Query: 1146 SAKLHVLDGIYTRMGASDSIQQGKSTFLDELTEASHILYNSTSHSLVIIDELGRGTSTHD 967
            SAKL VLDGI+TRMG+SDSIQQG+STFL+EL+EASHI++N TS SLVIIDELGRGTSTHD
Sbjct: 854  SAKLCVLDGIHTRMGSSDSIQQGRSTFLEELSEASHIIHNCTSRSLVIIDELGRGTSTHD 913

Query: 966  GVAIAYATLHYLLK-KKCMILFVTHYPKIVDIKNEFPSSVGSYHVSYLSSENSLAIMDPN 790
            GVAIAYATLHYLL+ K+CM+LFVTHYPKIVD+KNEFP SVG+YHVSY+ S+ ++  MD +
Sbjct: 914  GVAIAYATLHYLLEHKRCMVLFVTHYPKIVDVKNEFPGSVGAYHVSYMMSQRAMD-MDTD 972

Query: 789  SDQ--------SRNIEHGDITFLYKVVPGKSDRSFGLNVARLAQLPSLCIARAAVMAAKL 634
            +D+        ++ ++H D+T+LYK+VPG S+RSFG  VA+LAQLPS CI RA VMAA+L
Sbjct: 973  TDKTDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRANVMAAEL 1032

Query: 633  EELVACRLATEQRKKLLLETQYICEGNAQENILESSECSIGDHLDIYCNSVTEGIEGAGE 454
            E ++  R+     +K L          +Q++I   S CS  + +         G+E    
Sbjct: 1033 EAMIVSRVKNSSAQKTL--------QGSQQSISIQSGCSRAEQI---------GLE---- 1071

Query: 453  FTTSFHEIFVSLKHALGNTDHARSLQHLKHARNLAVELM 337
               +  E F+ LK ALGN D  RSLQ LKHAR++A EL+
Sbjct: 1072 -EDACREFFLDLKSALGNADPERSLQFLKHARSIAKELI 1109


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
            gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
            MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  538 bits (1386), Expect = e-150
 Identities = 281/454 (61%), Positives = 344/454 (75%), Gaps = 2/454 (0%)
 Frame = -3

Query: 1686 LSVSGSTHLIELPSDVKVPLNWVKVNSTKKTIRYHPPEVLEALDELMLSKEELAIASRSA 1507
            +SVSG+THLIELP+DVKVPLNWVK+NSTKK IRYHPPEVL ALD+L L+ EEL +  R+A
Sbjct: 665  MSVSGTTHLIELPADVKVPLNWVKINSTKKMIRYHPPEVLTALDQLALANEELMVVCRAA 724

Query: 1506 WGHFLERFSDYYAEFQACVQALAALDCLHSFALISRNKNYIRPEFVDDSKSVQIHIRAGR 1327
            W  FL  F+ +YAEFQA +QALAALDCLHS A++S+NKNY+RP FVDD++ VQIHI +GR
Sbjct: 725  WDSFLRSFAKHYAEFQAVIQALAALDCLHSLAILSKNKNYVRPVFVDDNEPVQIHISSGR 784

Query: 1326 HPVLDLILQGSFVPNDTDLHADGEHCQIVTGPNMGGKSCYIRQVALLSIMAQVGSFVPAS 1147
            HPVL+ IL  +FVPNDT LH DGEHCQ+VTGPNMGGKSCYIRQVAL+ +MAQVGSFVPAS
Sbjct: 785  HPVLETILLDNFVPNDTCLHVDGEHCQVVTGPNMGGKSCYIRQVALIVMMAQVGSFVPAS 844

Query: 1146 SAKLHVLDGIYTRMGASDSIQQGKSTFLDELTEASHILYNSTSHSLVIIDELGRGTSTHD 967
            SAKLHVLDGIYTRMGASDSIQQG+STFL+EL+E SHIL   T +SLVIIDELGRGTSTHD
Sbjct: 845  SAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILRKCTGYSLVIIDELGRGTSTHD 904

Query: 966  GVAIAYATL-HYLLKKKCMILFVTHYPKIVDIKNEFPSSVGSYHVSYLSSENSLAIMDPN 790
            G AIAYATL H L +K+CM+LFVTHYPKI +I+  F +SVG+YHVSYL +E +      N
Sbjct: 905  GEAIAYATLCHLLEQKRCMVLFVTHYPKIANIRTGFLNSVGAYHVSYLMAEKN------N 958

Query: 789  SDQSRNIEHGDITFLYKVVPGKSDRSFGLNVARLAQLPSLCIARAAVMAAKLEELVACRL 610
                   ++ D+T+LYK+VPG S+RSFG  VA+LAQLP+ CI RA VMAA+LEE ++CR+
Sbjct: 959  DATDSKFDNEDVTYLYKLVPGVSERSFGFKVAQLAQLPTSCIERATVMAARLEEAISCRI 1018

Query: 609  ATEQRKKLLLETQYICE-GNAQENILESSECSIGDHLDIYCNSVTEGIEGAGEFTTSFHE 433
                 K  LL+   I +    QE I ES             N   + IE   E   ++ +
Sbjct: 1019 RNRLDKSQLLKALQIDQLQEIQEKIPESPG-----------NFHDKRIENYEELNNTYEK 1067

Query: 432  IFVSLKHALGNTDHARSLQHLKHARNLAVELMKR 331
             F++ K AL   D A+S Q+L++AR++A  L+KR
Sbjct: 1068 FFLNFKSALLG-DDAKSFQYLENARSIARALIKR 1100


>ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
          Length = 1070

 Score =  531 bits (1367), Expect = e-148
 Identities = 281/453 (62%), Positives = 345/453 (76%), Gaps = 1/453 (0%)
 Frame = -3

Query: 1686 LSVSGSTHLIELPSDVKVPLNWVKVNSTKKTIRYHPPEVLEALDELMLSKEELAIASRSA 1507
            +S+SG+THLIEL +DVKVP NWVKVNSTKKTIRYHPPEVL  LD+L L+KEEL +A R+A
Sbjct: 641  ISISGTTHLIELSTDVKVPSNWVKVNSTKKTIRYHPPEVLTTLDKLSLAKEELTVACRAA 700

Query: 1506 WGHFLERFSDYYAEFQACVQALAALDCLHSFALISRNKNYIRPEFVDDSKSVQIHIRAGR 1327
            W +FL  FS +YAEFQA VQALAALDCLHS A++SRNK Y+ P FVDD + VQI I +GR
Sbjct: 701  WNNFLTDFSKHYAEFQAAVQALAALDCLHSLAILSRNKGYVCPVFVDDHEPVQIQISSGR 760

Query: 1326 HPVLDLILQGSFVPNDTDLHADGEHCQIVTGPNMGGKSCYIRQVALLSIMAQVGSFVPAS 1147
            HPVL+  LQ +FVPNDT++HADGE+CQIVTGPNMGGKSCYIRQVAL+ IMAQVGSFVPAS
Sbjct: 761  HPVLETTLQDNFVPNDTNMHADGEYCQIVTGPNMGGKSCYIRQVALIVIMAQVGSFVPAS 820

Query: 1146 SAKLHVLDGIYTRMGASDSIQQGKSTFLDELTEASHILYNSTSHSLVIIDELGRGTSTHD 967
            SAKLHVLD IYTRMGASDSIQ G+STFL+EL+E SHIL + T HSLVIIDELGRGTSTHD
Sbjct: 821  SAKLHVLDRIYTRMGASDSIQLGRSTFLEELSETSHILNSCTEHSLVIIDELGRGTSTHD 880

Query: 966  GVAIAYATLHYLLK-KKCMILFVTHYPKIVDIKNEFPSSVGSYHVSYLSSENSLAIMDPN 790
            G+AIA+ATLHYLLK K+ M+LFVTHYPKI  +  EFP SV +YHVS+L S         +
Sbjct: 881  GMAIAHATLHYLLKQKRSMVLFVTHYPKIASLATEFPGSVAAYHVSHLISH--------D 932

Query: 789  SDQSRNIEHGDITFLYKVVPGKSDRSFGLNVARLAQLPSLCIARAAVMAAKLEELVACRL 610
            + ++ N++H D+T+LYK+VPG S+RSFG  VA+LAQLPS CI+RA VMA+KLE LV  R+
Sbjct: 933  ASKNSNLDH-DVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRI 991

Query: 609  ATEQRKKLLLETQYICEGNAQENILESSECSIGDHLDIYCNSVTEGIEGAGEFTTSFHEI 430
                 K+LLL+T  I  G  +E ++  S       LD              EF  ++ + 
Sbjct: 992  HGRSTKELLLDTLVI--GQEKEQLMAQS-------LD----------RPHKEFDMAYKDF 1032

Query: 429  FVSLKHALGNTDHARSLQHLKHARNLAVELMKR 331
            +++LK A  + D A+S   L+HAR++A +L+ R
Sbjct: 1033 YLNLKAATEDDDWAKSFHLLEHARSIAKKLIGR 1065


>ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1|
            predicted protein [Populus trichocarpa]
          Length = 1092

 Score =  513 bits (1322), Expect = e-143
 Identities = 277/454 (61%), Positives = 339/454 (74%), Gaps = 2/454 (0%)
 Frame = -3

Query: 1686 LSVSGSTHLIELPSDVKVPLNWVKVNSTKKTIRYHPPEVLEALDELMLSKEELAIASRSA 1507
            +SVSG+THLIELP D KVPLNWVKVNSTKK IRYHPPEVL ALD+L+L+ EEL I SR+A
Sbjct: 676  MSVSGTTHLIELPLDFKVPLNWVKVNSTKKMIRYHPPEVLTALDQLLLANEELMIVSRAA 735

Query: 1506 WGHFLERFSDYYAEFQACVQALAALDCLHSFALISRNKNYIRPEFVDDSKSVQIHIRAGR 1327
            W  FL  F  YYAEF+  VQALA LDCL SFA + +NKNY+RP FVDDS+ +QI+I +GR
Sbjct: 736  WDSFLRGFGIYYAEFRGAVQALATLDCLFSFATLLKNKNYVRPMFVDDSEPLQINICSGR 795

Query: 1326 HPVLDLILQGSFVPNDTDLHADGEHCQIVTGPNMGGKSCYIRQVALLSIMAQVGSFVPAS 1147
            HPVL+ ILQ +FVPNDT+L AD E+CQIVTGPNMGGKSCYIRQVAL+++MAQVGSFVPA 
Sbjct: 796  HPVLETILQDNFVPNDTNLCADKEYCQIVTGPNMGGKSCYIRQVALIALMAQVGSFVPAL 855

Query: 1146 SAKLHVLDGIYTRMGASDSIQQGKSTFLDELTEASHILYNSTSHSLVIIDELGRGTSTHD 967
            SAKLHVLDGIYTRMGASDSIQQG+STFL+ELT+           SLVIIDELGRGTST+D
Sbjct: 856  SAKLHVLDGIYTRMGASDSIQQGRSTFLEELTQ-----------SLVIIDELGRGTSTYD 904

Query: 966  GVAIAYATLHYLL-KKKCMILFVTHYPKIVDIKNEFPSSVGSYHVSYLSSENSLAIMDPN 790
            G AIAYATL++LL +K+CM+LFVTHYPKIV+IK EFP SVG+YHVSYL+SE S   ++  
Sbjct: 905  GEAIAYATLYHLLDQKRCMVLFVTHYPKIVEIKTEFPGSVGAYHVSYLTSEKSEGAIEST 964

Query: 789  SDQSRNIEHGDITFLYKVVPGKSDRSFGLNVARLAQLPSLCIARAAVMAAKLEELVACRL 610
             D        D+T+LYK+VPG S++SFG  VA+LA+LP  CI RA +MAA+LE +++ RL
Sbjct: 965  CDTE------DVTYLYKLVPGVSEKSFGFKVAQLAELPPSCIRRATIMAARLEAVLSSRL 1018

Query: 609  ATEQRKKLLLETQYI-CEGNAQENILESSECSIGDHLDIYCNSVTEGIEGAGEFTTSFHE 433
              EQ    LLET  +  +  AQEN+L S                   IE + + T ++ E
Sbjct: 1019 GNEQ----LLETLPVQQQEEAQENMLRSD----------------VRIEKSEDSTVAYRE 1058

Query: 432  IFVSLKHALGNTDHARSLQHLKHARNLAVELMKR 331
             F +LK A+ + D ARS Q L+ AR++A E + +
Sbjct: 1059 FFSNLKSAMFDDDVARSSQFLEKARSIAKEFLAK 1092


>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 1094

 Score =  504 bits (1299), Expect = e-140
 Identities = 268/452 (59%), Positives = 330/452 (73%), Gaps = 1/452 (0%)
 Frame = -3

Query: 1683 SVSGSTHLIELPSDVKVPLNWVKVNSTKKTIRYHPPEVLEALDELMLSKEELAIASRSAW 1504
            SVSG+THLIEL  DVKVP  WVK+NSTKKT+RYHPPEVL ALDEL L+ EEL +ASR AW
Sbjct: 675  SVSGTTHLIELAIDVKVPSQWVKINSTKKTVRYHPPEVLAALDELSLANEELMVASRDAW 734

Query: 1503 GHFLERFSDYYAEFQACVQALAALDCLHSFALISRNKNYIRPEFVDDSKSVQIHIRAGRH 1324
              FL  FS YYAEFQA VQALA++DCL+S A++SRNKNY RPEFV D +  QIH+ +GRH
Sbjct: 735  DDFLRGFSRYYAEFQAAVQALASIDCLYSLAILSRNKNYARPEFVPDDEPAQIHLCSGRH 794

Query: 1323 PVLDLILQGSFVPNDTDLHADGEHCQIVTGPNMGGKSCYIRQVALLSIMAQVGSFVPASS 1144
            PVL+  LQG+FVPNDT+L A+GEHCQIVTGPNMGGKSCYIRQVAL+++M+QVGSFVPA S
Sbjct: 795  PVLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFS 854

Query: 1143 AKLHVLDGIYTRMGASDSIQQGKSTFLDELTEASHILYNSTSHSLVIIDELGRGTSTHDG 964
            AKLHVLDGIYTRMGASDSIQQG+STFL+E+TE SHIL +S+S SLVIIDELGRGTSTHDG
Sbjct: 855  AKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDG 914

Query: 963  VAIAYATLHYLL-KKKCMILFVTHYPKIVDIKNEFPSSVGSYHVSYLSSENSLAIMDPNS 787
            VAIAYA LH LL +KKC++LFVTHYPK+ +I  EFP+S G YHVSYL+S  S ++  P S
Sbjct: 915  VAIAYAALHSLLQQKKCLVLFVTHYPKVAEIAKEFPASAGVYHVSYLTSHKSPSLSGPKS 974

Query: 786  DQSRNIEHGDITFLYKVVPGKSDRSFGLNVARLAQLPSLCIARAAVMAAKLEELVACRLA 607
             +       D+T+LYK++ G ++ SFG  VA+LAQ+P  CIARA  M   LEE+V  R  
Sbjct: 975  TE-------DVTYLYKLISGVAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRR-- 1025

Query: 606  TEQRKKLLLETQYICEGNAQENILESSECSIGDHLDIYCNSVTEGIEGAGEFTTSFHEIF 427
              QRK      Q++ E + +    +S +            S  E I+G       + E F
Sbjct: 1026 -AQRKS---TEQHLAEASVKGLEWQSFQ------------SFLERIDG-------YEEFF 1062

Query: 426  VSLKHALGNTDHARSLQHLKHARNLAVELMKR 331
            + LK  + + D       +  AR++A++L+ R
Sbjct: 1063 LFLKATVRSADVGTWCHQIYQARSMAMDLLGR 1094