BLASTX nr result
ID: Aconitum21_contig00011647
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00011647
(1341 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24510.3| unnamed protein product [Vitis vinifera] 688 0.0
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec... 688 0.0
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec... 660 0.0
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec... 655 0.0
ref|XP_002510905.1| cleavage and polyadenylation specificity fac... 654 0.0
>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 688 bits (1775), Expect = 0.0
Identities = 342/430 (79%), Positives = 373/430 (86%)
Frame = -3
Query: 1339 WPTGIENCASGFITHCVADFVPQISSIPTDDLDSEWPTTKTEIGPIPNLIVTAANVLEVY 1160
WPTGIENCASGF+TH ADF PQI+ I TDDL+SEWPT K +IGP+PNLIVTAAN+LEVY
Sbjct: 11 WPTGIENCASGFVTHSRADFAPQIAPIQTDDLESEWPT-KRQIGPLPNLIVTAANILEVY 69
Query: 1159 AVRVHEDGSNKGFQPPPEVKRGASMGGVSSAWLELVCHYKLHGNVETMAVLXXXXXXXXX 980
VRV ED S + + E KRG M G+S A LELVC Y+LHGNVETM VL
Sbjct: 70 MVRVQEDDSRES-RASAETKRGGVMAGISGAALELVCQYRLHGNVETMTVLPSGGGDNSR 128
Query: 979 XXXSIVLAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWHHLKRGRESFAKGPLVKVDPQ 800
SI+LAF+DAKISVLEFDDSIHGLRTSSMHCFEGPEW HLKRG ESFA+GPLVKVDPQ
Sbjct: 129 RRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFARGPLVKVDPQ 188
Query: 799 GRCGGVLVYGLQMVVLKAFQAGYGLVGDDEASGSGGTVSARIESSYVINLRDLDMDHIKD 620
GRC GVLVYGLQM++LKA QAGYGLVGD+EA SG VSAR+ESSYVI+LRDLDM H+KD
Sbjct: 189 GRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLRDLDMKHVKD 248
Query: 619 FTFVHGYIEPVMVVLHERELTWAGRISWKHHTCMISAHSISTSLKQHPLIWSAANLPHDA 440
FTFVHGYIEPVMV+LHERELTWAGR+SWKHHTCMISA SIST+LKQHPLIWSA NLPHDA
Sbjct: 249 FTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDA 308
Query: 439 YKLLAVPSPIGGVLVISANAIYYHSQSASCALALNQYAVSVDSSQELPRSSFNVELDAAN 260
YKLL VPSPIGGV+VISAN+I+YHSQSASCALALN YAVS D+SQE+PRSSF+VELDAAN
Sbjct: 309 YKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQEMPRSSFSVELDAAN 368
Query: 259 ATWLLNDVVMLSTKTGELLLLTLVYDGRVVHRLELSKSRASVLTSGITTIGNSFVFLGSR 80
ATWL NDV MLSTKTGELLLLTL YDGRVVHRL+LSKSRASVLTSGI IGNS FLGSR
Sbjct: 369 ATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRASVLTSGIAAIGNSLFFLGSR 428
Query: 79 LGDSMLVQYT 50
LGDS+LVQ+T
Sbjct: 429 LGDSLLVQFT 438
>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Vitis vinifera]
Length = 1442
Score = 688 bits (1775), Expect = 0.0
Identities = 342/430 (79%), Positives = 373/430 (86%)
Frame = -3
Query: 1339 WPTGIENCASGFITHCVADFVPQISSIPTDDLDSEWPTTKTEIGPIPNLIVTAANVLEVY 1160
WPTGIENCASGF+TH ADF PQI+ I TDDL+SEWPT K +IGP+PNLIVTAAN+LEVY
Sbjct: 11 WPTGIENCASGFVTHSRADFAPQIAPIQTDDLESEWPT-KRQIGPLPNLIVTAANILEVY 69
Query: 1159 AVRVHEDGSNKGFQPPPEVKRGASMGGVSSAWLELVCHYKLHGNVETMAVLXXXXXXXXX 980
VRV ED S + + E KRG M G+S A LELVC Y+LHGNVETM VL
Sbjct: 70 MVRVQEDDSRES-RASAETKRGGVMAGISGAALELVCQYRLHGNVETMTVLPSGGGDNSR 128
Query: 979 XXXSIVLAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWHHLKRGRESFAKGPLVKVDPQ 800
SI+LAF+DAKISVLEFDDSIHGLRTSSMHCFEGPEW HLKRG ESFA+GPLVKVDPQ
Sbjct: 129 RRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFARGPLVKVDPQ 188
Query: 799 GRCGGVLVYGLQMVVLKAFQAGYGLVGDDEASGSGGTVSARIESSYVINLRDLDMDHIKD 620
GRC GVLVYGLQM++LKA QAGYGLVGD+EA SG VSAR+ESSYVI+LRDLDM H+KD
Sbjct: 189 GRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLRDLDMKHVKD 248
Query: 619 FTFVHGYIEPVMVVLHERELTWAGRISWKHHTCMISAHSISTSLKQHPLIWSAANLPHDA 440
FTFVHGYIEPVMV+LHERELTWAGR+SWKHHTCMISA SIST+LKQHPLIWSA NLPHDA
Sbjct: 249 FTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDA 308
Query: 439 YKLLAVPSPIGGVLVISANAIYYHSQSASCALALNQYAVSVDSSQELPRSSFNVELDAAN 260
YKLL VPSPIGGV+VISAN+I+YHSQSASCALALN YAVS D+SQE+PRSSF+VELDAAN
Sbjct: 309 YKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQEMPRSSFSVELDAAN 368
Query: 259 ATWLLNDVVMLSTKTGELLLLTLVYDGRVVHRLELSKSRASVLTSGITTIGNSFVFLGSR 80
ATWL NDV MLSTKTGELLLLTL YDGRVVHRL+LSKSRASVLTSGI IGNS FLGSR
Sbjct: 369 ATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRASVLTSGIAAIGNSLFFLGSR 428
Query: 79 LGDSMLVQYT 50
LGDS+LVQ+T
Sbjct: 429 LGDSLLVQFT 438
>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Glycine max]
Length = 1447
Score = 660 bits (1702), Expect = 0.0
Identities = 330/437 (75%), Positives = 375/437 (85%), Gaps = 4/437 (0%)
Frame = -3
Query: 1336 PTGIENCASGFITHCVADFVPQISSIPTDDLDSEWPTT-KTEIGPIPNLIVTAANVLEVY 1160
PTGI+NCA+GF+TH +DFVP + DDLD+EWP+ + +G +PNL+VTAANVLEVY
Sbjct: 12 PTGIDNCAAGFLTHSRSDFVP----LQPDDLDAEWPSRPRHHVGSLPNLVVTAANVLEVY 67
Query: 1159 AVRVHEDGSNKGFQPPP---EVKRGASMGGVSSAWLELVCHYKLHGNVETMAVLXXXXXX 989
AVR+ ED QPP + +RGA + G++ A LELVCHY+LHGNVETMAVL
Sbjct: 68 AVRLQED------QPPKAAADSRRGALLDGIAGASLELVCHYRLHGNVETMAVLSIGGGD 121
Query: 988 XXXXXXSIVLAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWHHLKRGRESFAKGPLVKV 809
SI+L F DAKISVLE+DDSIHGLRTSS+HCFEGPEW HLKRGRE FA+GP+VKV
Sbjct: 122 VSRRRDSIMLTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPVVKV 181
Query: 808 DPQGRCGGVLVYGLQMVVLKAFQAGYGLVGDDEASGSGGTVSARIESSYVINLRDLDMDH 629
DPQGRCGGVL+Y LQM++LKA QAG GLVG+D+A GS G V+ARIESSY+INLRDLDM H
Sbjct: 182 DPQGRCGGVLIYDLQMIILKATQAGSGLVGEDDALGSSGAVAARIESSYMINLRDLDMRH 241
Query: 628 IKDFTFVHGYIEPVMVVLHERELTWAGRISWKHHTCMISAHSISTSLKQHPLIWSAANLP 449
+KDFTFVHGYIEPVMV+LHERELTWAGR+SWKHHTCMISA SIST+LKQHPLIWSA NLP
Sbjct: 242 VKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLP 301
Query: 448 HDAYKLLAVPSPIGGVLVISANAIYYHSQSASCALALNQYAVSVDSSQELPRSSFNVELD 269
HDAYKLLAVPSPIGGVLVISAN I+YHSQSASCALALN YAV++DSSQE+PRSSFNVELD
Sbjct: 302 HDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNSYAVTLDSSQEIPRSSFNVELD 361
Query: 268 AANATWLLNDVVMLSTKTGELLLLTLVYDGRVVHRLELSKSRASVLTSGITTIGNSFVFL 89
AANATWLL+DV +LSTKTGELLLLTLVYDGRVV RL+LSKS+ASVL+SGITTIGNS FL
Sbjct: 362 AANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFL 421
Query: 88 GSRLGDSMLVQYTCGVG 38
SRLGDSMLVQ++CG G
Sbjct: 422 ASRLGDSMLVQFSCGSG 438
>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cucumis sativus]
Length = 1504
Score = 655 bits (1690), Expect = 0.0
Identities = 323/434 (74%), Positives = 374/434 (86%)
Frame = -3
Query: 1339 WPTGIENCASGFITHCVADFVPQISSIPTDDLDSEWPTTKTEIGPIPNLIVTAANVLEVY 1160
WPTGIENC S +ITH ADFVP ++S +DDLDS+W + +IGP+PNL+VTA NVLEVY
Sbjct: 11 WPTGIENCDSAYITHSRADFVPAVTS-HSDDLDSDWHPRR-DIGPVPNLVVTAGNVLEVY 68
Query: 1159 AVRVHEDGSNKGFQPPPEVKRGASMGGVSSAWLELVCHYKLHGNVETMAVLXXXXXXXXX 980
VRV E+G + + EV+RG M GVS A LELVCHY+LHGNVE+MA+L
Sbjct: 69 VVRVLEEGGRES-KSSGEVRRGGIMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSK 127
Query: 979 XXXSIVLAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWHHLKRGRESFAKGPLVKVDPQ 800
SI+L F++AKISVLEFDDS H LRTSSMHCF+GP+W HLKRGRESFA+GP+VKVDPQ
Sbjct: 128 KRDSIILVFQEAKISVLEFDDSTHSLRTSSMHCFDGPQWLHLKRGRESFARGPVVKVDPQ 187
Query: 799 GRCGGVLVYGLQMVVLKAFQAGYGLVGDDEASGSGGTVSARIESSYVINLRDLDMDHIKD 620
GRCGGVLVYGLQM++LKA QAG GLV DDEA G+ G +SAR+ESSY+INLRDLD+ H+KD
Sbjct: 188 GRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNTGAISARVESSYLINLRDLDVKHVKD 247
Query: 619 FTFVHGYIEPVMVVLHERELTWAGRISWKHHTCMISAHSISTSLKQHPLIWSAANLPHDA 440
F FVHGYIEPVMV+LHE+ELTWAGR+SWKHHTCM+SA SIST+LKQHPLIWSA+NLPHDA
Sbjct: 248 FVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMVSALSISTTLKQHPLIWSASNLPHDA 307
Query: 439 YKLLAVPSPIGGVLVISANAIYYHSQSASCALALNQYAVSVDSSQELPRSSFNVELDAAN 260
YKLLAVPSPIGGVLVISAN+I+Y+SQSASC LALN YAVS DSSQ++PRS+FNVELDAAN
Sbjct: 308 YKLLAVPSPIGGVLVISANSIHYNSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAAN 367
Query: 259 ATWLLNDVVMLSTKTGELLLLTLVYDGRVVHRLELSKSRASVLTSGITTIGNSFVFLGSR 80
ATWL+NDV +LSTKTGELLLL LVYDGRVV RL+LSKS+ASVLTSGI +IGNS FLGSR
Sbjct: 368 ATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLTSGIASIGNSLFFLGSR 427
Query: 79 LGDSMLVQYTCGVG 38
LGDS+LVQ++CGVG
Sbjct: 428 LGDSLLVQFSCGVG 441
>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
[Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
and polyadenylation specificity factor cpsf, putative
[Ricinus communis]
Length = 1461
Score = 654 bits (1686), Expect = 0.0
Identities = 324/434 (74%), Positives = 367/434 (84%)
Frame = -3
Query: 1339 WPTGIENCASGFITHCVADFVPQISSIPTDDLDSEWPTTKTEIGPIPNLIVTAANVLEVY 1160
WPTGIE+CASG+ITH ADFVPQI I TD+LDSEWP +K IGP+PNLIVTA +VLEVY
Sbjct: 11 WPTGIESCASGYITHSRADFVPQIPPIQTDNLDSEWPPSKRGIGPMPNLIVTAGSVLEVY 70
Query: 1159 AVRVHEDGSNKGFQPPPEVKRGASMGGVSSAWLELVCHYKLHGNVETMAVLXXXXXXXXX 980
VRV EDGS + + E KRG M GVS A LELVCHY+LHGNVE+M VL
Sbjct: 71 VVRVQEDGSRES-RSSRETKRGGLMDGVSGASLELVCHYRLHGNVESMVVLPTEGGDSSR 129
Query: 979 XXXSIVLAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWHHLKRGRESFAKGPLVKVDPQ 800
SI+LAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEW HLKRGRESFA+GPL+KVDPQ
Sbjct: 130 RRDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLKRGRESFARGPLLKVDPQ 189
Query: 799 GRCGGVLVYGLQMVVLKAFQAGYGLVGDDEASGSGGTVSARIESSYVINLRDLDMDHIKD 620
GRCGG+LVY +QM++L+A QA GLVGDD+A SGG++SAR++SSYVINLRD+DM H+KD
Sbjct: 190 GRCGGILVYDMQMIILRAAQASSGLVGDDDALSSGGSISARVQSSYVINLRDMDMKHVKD 249
Query: 619 FTFVHGYIEPVMVVLHERELTWAGRISWKHHTCMISAHSISTSLKQHPLIWSAANLPHDA 440
F F+H YIEPV+V+LHERELTWAGR+SWKHHTCMISA SIST+LKQ LIWS NLPHDA
Sbjct: 250 FIFLHDYIEPVVVILHERELTWAGRVSWKHHTCMISALSISTTLKQPTLIWSVVNLPHDA 309
Query: 439 YKLLAVPSPIGGVLVISANAIYYHSQSASCALALNQYAVSVDSSQELPRSSFNVELDAAN 260
YKLLAVP PIGGVLVI AN I+YHS+SA+ ALALN YAVS+DSSQELPR+SF+VELDA
Sbjct: 310 YKLLAVPPPIGGVLVICANTIHYHSESATYALALNNYAVSIDSSQELPRASFSVELDAVK 369
Query: 259 ATWLLNDVVMLSTKTGELLLLTLVYDGRVVHRLELSKSRASVLTSGITTIGNSFVFLGSR 80
A WLLNDV +LS K GELLLL+LVYDGRVV RL+LSKS+ASVLTS ITTIGNS FLGSR
Sbjct: 370 AAWLLNDVALLSAKNGELLLLSLVYDGRVVQRLDLSKSKASVLTSDITTIGNSLFFLGSR 429
Query: 79 LGDSMLVQYTCGVG 38
LGDS+LVQ+T G+G
Sbjct: 430 LGDSLLVQFTNGLG 443