BLASTX nr result

ID: Aconitum21_contig00011613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00011613
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530366.1| Transmembrane and coiled-coil domains protei...   135   7e-30
ref|XP_002280441.1| PREDICTED: transmembrane and coiled-coil dom...   134   1e-29
gb|AFW90618.1| transmembrane and coiled-coil domains protein [So...   132   5e-29
ref|XP_004136557.1| PREDICTED: transmembrane and coiled-coil dom...   129   5e-28
ref|NP_566409.1| uncharacterized protein [Arabidopsis thaliana] ...   129   5e-28

>ref|XP_002530366.1| Transmembrane and coiled-coil domains protein, putative [Ricinus
           communis] gi|223530113|gb|EEF32027.1| Transmembrane and
           coiled-coil domains protein, putative [Ricinus communis]
          Length = 192

 Score =  135 bits (339), Expect = 7e-30
 Identities = 63/71 (88%), Positives = 67/71 (94%)
 Frame = -1

Query: 603 VAKLPFSPAALVQKMSHRGIAGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGA 424
           VAKLPF+P A+V+KMSHRG+ GDD TDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGA
Sbjct: 122 VAKLPFTPIAIVRKMSHRGLQGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGA 181

Query: 423 GLFPMPDQKTN 391
           GLFPMPD KTN
Sbjct: 182 GLFPMPDPKTN 192


>ref|XP_002280441.1| PREDICTED: transmembrane and coiled-coil domains protein 1 [Vitis
           vinifera] gi|297739810|emb|CBI29992.3| unnamed protein
           product [Vitis vinifera]
          Length = 193

 Score =  134 bits (338), Expect = 1e-29
 Identities = 63/72 (87%), Positives = 67/72 (93%)
 Frame = -1

Query: 606 SVAKLPFSPAALVQKMSHRGIAGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAG 427
           SVAKLPF P ++V KMSHRG+ G+DPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAG
Sbjct: 122 SVAKLPFVPISIVMKMSHRGLNGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAG 181

Query: 426 AGLFPMPDQKTN 391
           AGLFPMPD KTN
Sbjct: 182 AGLFPMPDPKTN 193


>gb|AFW90618.1| transmembrane and coiled-coil domains protein [Solanum tuberosum]
          Length = 194

 Score =  132 bits (332), Expect = 5e-29
 Identities = 63/71 (88%), Positives = 65/71 (91%)
 Frame = -1

Query: 603 VAKLPFSPAALVQKMSHRGIAGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGA 424
           VAKLPF P  LVQKMSHRG+ GDD TDCSMAFLYFLCSISIRTNLQKFLGFSPPRG+AGA
Sbjct: 124 VAKLPFIPFRLVQKMSHRGLPGDDMTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGSAGA 183

Query: 423 GLFPMPDQKTN 391
           GLFPMPD KTN
Sbjct: 184 GLFPMPDPKTN 194


>ref|XP_004136557.1| PREDICTED: transmembrane and coiled-coil domains protein 1-like
           [Cucumis sativus] gi|449518535|ref|XP_004166297.1|
           PREDICTED: transmembrane and coiled-coil domains protein
           1-like [Cucumis sativus]
          Length = 191

 Score =  129 bits (323), Expect = 5e-28
 Identities = 62/71 (87%), Positives = 64/71 (90%)
 Frame = -1

Query: 603 VAKLPFSPAALVQKMSHRGIAGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGA 424
           VAKLPF P  LV KMSHRG+ GDDPTDC+MAFLYFLCSISIRTNLQKFLGFSPPRG AGA
Sbjct: 122 VAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRG-AGA 180

Query: 423 GLFPMPDQKTN 391
           GLFPMPD KTN
Sbjct: 181 GLFPMPDPKTN 191


>ref|NP_566409.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12322003|gb|AAG51041.1|AC069473_3 unknown protein;
           47077-47667 [Arabidopsis thaliana]
           gi|10998144|dbj|BAB03115.1| unnamed protein product
           [Arabidopsis thaliana] gi|26451620|dbj|BAC42907.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973219|gb|AAO63934.1| unknown protein [Arabidopsis
           thaliana] gi|332641618|gb|AEE75139.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 196

 Score =  129 bits (323), Expect = 5e-28
 Identities = 62/72 (86%), Positives = 65/72 (90%), Gaps = 1/72 (1%)
 Frame = -1

Query: 603 VAKLPFSPAALVQKMSHRGIAGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGA 424
           VAKLPF P  +V+KMSHRG+ GDDPTDCSMAFLY LCSISIRTNLQKFLGFSPPRGAAGA
Sbjct: 125 VAKLPFHPITIVKKMSHRGLKGDDPTDCSMAFLYLLCSISIRTNLQKFLGFSPPRGAAGA 184

Query: 423 -GLFPMPDQKTN 391
            GLFPMPD KTN
Sbjct: 185 GGLFPMPDPKTN 196


Top