BLASTX nr result

ID: Aconitum21_contig00011523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00011523
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloro...   175   7e-42
ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloro...   174   9e-42
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]      173   3e-41
ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
gb|ABK95755.1| unknown [Populus trichocarpa]                          172   3e-41

>ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
           sativus]
          Length = 150

 Score =  175 bits (443), Expect = 7e-42
 Identities = 93/153 (60%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = +3

Query: 15  ATATSGVLVSSHSTLHXXXXXXXXXXXXXXXXXXXXXELGFLSSQLSGLKISIDG--VAP 188
           A   SGV+ +S + LH                     +LGFL+SQLSG++IS +   ++P
Sbjct: 12  AATCSGVMTTSSTKLHFRTKPSS--------------DLGFLTSQLSGIRISSNHSLISP 57

Query: 189 QNYAN-PIRHVIQPVARRVCPLTGKKSNRANKVSFSNHKTKKLQFVNLQYKRIWWEAGKR 365
            + +  P+R  +QPVARR+CP TGKK+N+ N VSFSNHKTKKLQFVNLQYK++WWEAGKR
Sbjct: 58  SSISTAPLRPSLQPVARRICPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKR 117

Query: 366 FVKLRLSTKALKTIEKNGLDAVAKKAGMDLRKE 464
           FVKLRLSTKALKTIEKNGLDAVAKKAG+DLRKE
Sbjct: 118 FVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 150


>ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
           sativus]
          Length = 150

 Score =  174 bits (442), Expect = 9e-42
 Identities = 93/153 (60%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = +3

Query: 15  ATATSGVLVSSHSTLHXXXXXXXXXXXXXXXXXXXXXELGFLSSQLSGLKISIDG--VAP 188
           A   SGV+ +S + LH                     +LGFL+SQLSG++IS +   ++P
Sbjct: 12  AATCSGVMTTSSTKLHFRTKPNS--------------DLGFLTSQLSGIRISSNHSLISP 57

Query: 189 QNYAN-PIRHVIQPVARRVCPLTGKKSNRANKVSFSNHKTKKLQFVNLQYKRIWWEAGKR 365
            + +  P+R  +QPVARR+CP TGKK+N+ N VSFSNHKTKKLQFVNLQYK++WWEAGKR
Sbjct: 58  ASISTAPLRPSLQPVARRICPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKR 117

Query: 366 FVKLRLSTKALKTIEKNGLDAVAKKAGMDLRKE 464
           FVKLRLSTKALKTIEKNGLDAVAKKAG+DLRKE
Sbjct: 118 FVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 150


>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 153

 Score =  173 bits (438), Expect = 3e-41
 Identities = 86/114 (75%), Positives = 101/114 (88%), Gaps = 1/114 (0%)
 Frame = +3

Query: 126 ELGFLSSQLSGLKISIDGVAPQNYANPIRHVIQPV-ARRVCPLTGKKSNRANKVSFSNHK 302
           E+GF++SQLSG++IS +   P+  + P    +QPV ARR+CP TGKK+NRANKVSFSNHK
Sbjct: 42  EIGFVTSQLSGIRISYN--PPEPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHK 99

Query: 303 TKKLQFVNLQYKRIWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGMDLRKE 464
           TKKLQFVNLQYKR+WWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAG+DLRK+
Sbjct: 100 TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 153


>ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|222864614|gb|EEF01745.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  172 bits (437), Expect = 3e-41
 Identities = 86/114 (75%), Positives = 101/114 (88%), Gaps = 1/114 (0%)
 Frame = +3

Query: 126 ELGFLSSQLSGLKISIDGVAPQNYANPIRHVIQPV-ARRVCPLTGKKSNRANKVSFSNHK 302
           E+GF++SQLSG++IS +   P+  + P    +QPV ARR+CP TGKK+NRANKVSFSNHK
Sbjct: 7   EIGFVTSQLSGIRISYN--PPKPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHK 64

Query: 303 TKKLQFVNLQYKRIWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGMDLRKE 464
           TKKLQFVNLQYKR+WWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAG+DLRK+
Sbjct: 65  TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 118


>gb|ABK95755.1| unknown [Populus trichocarpa]
          Length = 150

 Score =  172 bits (437), Expect = 3e-41
 Identities = 86/114 (75%), Positives = 101/114 (88%), Gaps = 1/114 (0%)
 Frame = +3

Query: 126 ELGFLSSQLSGLKISIDGVAPQNYANPIRHVIQPV-ARRVCPLTGKKSNRANKVSFSNHK 302
           E+GF++SQLSG++IS +   P+  + P    +QPV ARR+CP TGKK+NRANKVSFSNHK
Sbjct: 39  EIGFVTSQLSGIRISYN--PPKPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHK 96

Query: 303 TKKLQFVNLQYKRIWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGMDLRKE 464
           TKKLQFVNLQYKR+WWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAG+DLRK+
Sbjct: 97  TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 150


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