BLASTX nr result
ID: Aconitum21_contig00010433
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00010433
(749 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22501.3| unnamed protein product [Vitis vinifera] 215 7e-54
ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mi... 215 7e-54
ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arab... 211 1e-52
ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putativ... 211 1e-52
ref|NP_196459.1| RNA-binding KH domain-containing protein [Arabi... 210 3e-52
>emb|CBI22501.3| unnamed protein product [Vitis vinifera]
Length = 424
Score = 215 bits (548), Expect = 7e-54
Identities = 116/215 (53%), Positives = 138/215 (64%)
Frame = -1
Query: 749 QQLLGSNSSTLKAIEILTNCYVLVQGNTVSAMGSFKGLKQVRRIVEDCIQNKLHPIFHIK 570
Q L+G NSSTLKA+EILT CY+LVQGNTV+AMGSFKGLKQVRR+VEDCIQNK+HP++HIK
Sbjct: 196 QHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEDCIQNKMHPVYHIK 255
Query: 569 NLMVKRELEKIPDLAHESWDRFLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQL 390
LM+KREL P L +E+WDRFLP KVDLQL
Sbjct: 256 TLMMKRELASDPALENENWDRFLPKFKKKNVKQKKVKSKEKKPYTPFPPPQPPSKVDLQL 315
Query: 389 ESGEYFLSDKRXXXXXXXXXXXXXXXXXXENKRKREASFLPPEETAKVDTNKSDAGNNDM 210
ESGEYFLSD++ ENKRKREA+F+PP E D +KS ND+
Sbjct: 316 ESGEYFLSDQKKFAKKWQQKLEKQAEKTAENKRKREAAFVPPMEPMVQDPSKSADDKNDV 375
Query: 209 TAVVKSLKKKAKELGTRKEADNINAESYIAAPVEA 105
A+ SLKKKAKE G +K +N+N E+YIAA EA
Sbjct: 376 AAMAMSLKKKAKEFGKQKSLENVNPETYIAASGEA 410
>ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Vitis
vinifera]
Length = 386
Score = 215 bits (548), Expect = 7e-54
Identities = 116/215 (53%), Positives = 138/215 (64%)
Frame = -1
Query: 749 QQLLGSNSSTLKAIEILTNCYVLVQGNTVSAMGSFKGLKQVRRIVEDCIQNKLHPIFHIK 570
Q L+G NSSTLKA+EILT CY+LVQGNTV+AMGSFKGLKQVRR+VEDCIQNK+HP++HIK
Sbjct: 158 QHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEDCIQNKMHPVYHIK 217
Query: 569 NLMVKRELEKIPDLAHESWDRFLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQL 390
LM+KREL P L +E+WDRFLP KVDLQL
Sbjct: 218 TLMMKRELASDPALENENWDRFLPKFKKKNVKQKKVKSKEKKPYTPFPPPQPPSKVDLQL 277
Query: 389 ESGEYFLSDKRXXXXXXXXXXXXXXXXXXENKRKREASFLPPEETAKVDTNKSDAGNNDM 210
ESGEYFLSD++ ENKRKREA+F+PP E D +KS ND+
Sbjct: 278 ESGEYFLSDQKKFAKKWQQKLEKQAEKTAENKRKREAAFVPPMEPMVQDPSKSADDKNDV 337
Query: 209 TAVVKSLKKKAKELGTRKEADNINAESYIAAPVEA 105
A+ SLKKKAKE G +K +N+N E+YIAA EA
Sbjct: 338 AAMAMSLKKKAKEFGKQKSLENVNPETYIAASGEA 372
>ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arabidopsis lyrata subsp.
lyrata] gi|297317162|gb|EFH47584.1| hypothetical protein
ARALYDRAFT_487679 [Arabidopsis lyrata subsp. lyrata]
Length = 391
Score = 211 bits (538), Expect = 1e-52
Identities = 113/215 (52%), Positives = 142/215 (66%), Gaps = 3/215 (1%)
Frame = -1
Query: 749 QQLLGSNSSTLKAIEILTNCYVLVQGNTVSAMGSFKGLKQVRRIVEDCIQNKLHPIFHIK 570
Q+L+G NSSTLKA+EILTNCY+LVQG+TV+AMG FKGLKQ+RRIVEDC+QNK+HP++HIK
Sbjct: 161 QRLVGPNSSTLKALEILTNCYILVQGSTVAAMGPFKGLKQLRRIVEDCVQNKMHPVYHIK 220
Query: 569 NLMVKRELEKIPDLAHESWDRFLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQL 390
LM+K+ELEK P LA+ESWDRFLP K+D+QL
Sbjct: 221 TLMMKKELEKDPALANESWDRFLPTFRKKNVKQKKPKSKEKKPYTPFPPPQPPSKIDMQL 280
Query: 389 ESGEYFLSDKRXXXXXXXXXXXXXXXXXXENKRKREASFLPPEETAKVDT--NKSDAGNN 216
ESGEYF+SDK+ ENKRKR+ASFLPPEE ++ N S+ G N
Sbjct: 281 ESGEYFMSDKKKSEKKWLEKQEKQTEKSTENKRKRDASFLPPEEPMNNNSKANNSEDGKN 340
Query: 215 DMTAVVKSLKKKAKELGTRKEA-DNINAESYIAAP 114
D+T + +SLK K KEL +K+ + +NAE YIA P
Sbjct: 341 DITELTQSLKSKTKELKKQKKTHERVNAEEYIAGP 375
>ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putative [Ricinus communis]
gi|223547313|gb|EEF48808.1| Ribosomal RNA assembly
protein mis3, putative [Ricinus communis]
Length = 377
Score = 211 bits (538), Expect = 1e-52
Identities = 112/214 (52%), Positives = 138/214 (64%)
Frame = -1
Query: 749 QQLLGSNSSTLKAIEILTNCYVLVQGNTVSAMGSFKGLKQVRRIVEDCIQNKLHPIFHIK 570
Q L+G NSSTLKA+EILT CY+LVQGNTV+AMGSFKGLKQVR+IVEDCIQNKLHP++HIK
Sbjct: 152 QHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRKIVEDCIQNKLHPVYHIK 211
Query: 569 NLMVKRELEKIPDLAHESWDRFLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQL 390
LM+K+ELEK P L +E+WDRFLP KVD +L
Sbjct: 212 ILMMKKELEKDPALQNENWDRFLPKFKKKNVKHNKVKRKEKKPYTPFPPEQQPSKVDREL 271
Query: 389 ESGEYFLSDKRXXXXXXXXXXXXXXXXXXENKRKREASFLPPEETAKVDTNKSDAGNNDM 210
ESGEYFL++++ ENKRKR+ +F+PPEE D KS+ NND+
Sbjct: 272 ESGEYFLNNQKKQAKKWQEKQERQAEKTAENKRKRDTAFVPPEEHRDQDAGKSEDKNNDV 331
Query: 209 TAVVKSLKKKAKELGTRKEADNINAESYIAAPVE 108
A+ S+KKKAK+ G + +NINAE YIAA E
Sbjct: 332 AAIALSIKKKAKDFGKKNAVENINAEEYIAASGE 365
>ref|NP_196459.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|13878039|gb|AAK44097.1|AF370282_1 putative rev
interacting protein mis3 [Arabidopsis thaliana]
gi|10178284|emb|CAC08342.1| rev interacting protein
mis3-like [Arabidopsis thaliana]
gi|23296614|gb|AAN13132.1| putative rev interacting
protein mis3 [Arabidopsis thaliana]
gi|332003916|gb|AED91299.1| RNA-binding KH
domain-containing protein [Arabidopsis thaliana]
Length = 391
Score = 210 bits (534), Expect = 3e-52
Identities = 113/215 (52%), Positives = 140/215 (65%), Gaps = 3/215 (1%)
Frame = -1
Query: 749 QQLLGSNSSTLKAIEILTNCYVLVQGNTVSAMGSFKGLKQVRRIVEDCIQNKLHPIFHIK 570
Q+L+G NSSTLKA+EILTNCY+LVQG+TV+AMG FKGLKQ+RRIVEDC+QN +HP++HIK
Sbjct: 161 QRLVGPNSSTLKALEILTNCYILVQGSTVAAMGPFKGLKQLRRIVEDCVQNIMHPVYHIK 220
Query: 569 NLMVKRELEKIPDLAHESWDRFLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDLQL 390
LM+K+ELEK P LA+ESWDRFLP K+D+QL
Sbjct: 221 TLMMKKELEKDPALANESWDRFLPTFRKKNVKQKKPKSKEKKPYTPFPPPQPPSKIDMQL 280
Query: 389 ESGEYFLSDKRXXXXXXXXXXXXXXXXXXENKRKREASFLPPEE--TAKVDTNKSDAGNN 216
ESGEYF+SDK+ ENKRKR+ASFLPPEE + NKS+ G N
Sbjct: 281 ESGEYFMSDKKKSEKKWQEKQEKQSEKSTENKRKRDASFLPPEEPMNNNSNANKSEDGKN 340
Query: 215 DMTAVVKSLKKKAKELGTRKEA-DNINAESYIAAP 114
D+T + SLK K KEL +K+ + +NAE YIA P
Sbjct: 341 DITELTNSLKSKTKELKKQKKTHERVNAEEYIAGP 375