BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00009677
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...   516   e-144
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...   499   e-139
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...   498   e-139
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...   493   e-137
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   489   e-136

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score =  516 bits (1328), Expect = e-144
 Identities = 269/375 (71%), Positives = 297/375 (79%), Gaps = 4/375 (1%)
 Frame = +1

Query: 1    DSYAALSLGNWNYFAAIRSEKRGPKLEATHLEKAKELYTKVLIQHPSNLYAANGAAVVLA 180
            DSYA LSLGNWNYFAAIRSEKR PKLEATHLEKAKELYT+VL+QH +NLYAANGA VVLA
Sbjct: 627  DSYATLSLGNWNYFAAIRSEKRAPKLEATHLEKAKELYTRVLVQHNANLYAANGAGVVLA 686

Query: 181  EKGQFDVSKDIFTQVQEASSGSVFVQMSDVWINLAHVYFAQGQFALAVKMYQNCLRKFYF 360
            EKG FDVSKDIFTQVQEA+SGSVFVQM DVWINLAHVYFAQG FALAVKMYQNCLRKFY+
Sbjct: 687  EKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYY 746

Query: 361  NTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHMAPSNYTLRFDAGVAMQKFSASTLQKTK 540
            NTD+QVLLYLARTHYEAEQWQDCKKTLLRAIH+APSNYTLRFDAGVAMQKFSASTLQKTK
Sbjct: 747  NTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTK 806

Query: 541  RTADEVRSTVSELQNAVRVFSQLSAASSHHTHGFDEKKIETHVEYCKHLLEAAKVHCEAA 720
            RTADEVRSTV+EL+NAVR+FSQLSAAS+ H HGFDEKKIETHV YCKHLLEAAKVHCEAA
Sbjct: 807  RTADEVRSTVAELKNAVRIFSQLSAASNLHFHGFDEKKIETHVGYCKHLLEAAKVHCEAA 866

Query: 721  XXXXXXXXXXLEVARQVSLXXXXXXXXXXXXXYQLERRKQEDEIKQVRQQEERFERVKEQ 900
                      +E+ARQV+L             +QLERRKQEDE+K+V QQE+ FERVKEQ
Sbjct: 867  EREELQNRHRVELARQVNLAEEARRKAEEQRKFQLERRKQEDELKRVMQQEQHFERVKEQ 926

Query: 901  WKSSTPASKRKDRSQA-XXXXXXXXXXXXXXXXXXXXXXSHNEMDETEPNY---EHEMDD 1068
            WKS+   SKRK+RSQ                        S  + +E   +    + EM+D
Sbjct: 927  WKSNNLNSKRKERSQIDDDEGGQSERRRRKGGKRRKKDKSRYDSEEARADAMDDQDEMED 986

Query: 1069 DDANMTNNYEDDTNQ 1113
            +D NM  N+ + TNQ
Sbjct: 987  EDTNM--NHRESTNQ 999


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
            gi|223544778|gb|EEF46294.1| tpr repeat nuclear
            phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score =  499 bits (1284), Expect = e-139
 Identities = 258/378 (68%), Positives = 294/378 (77%), Gaps = 7/378 (1%)
 Frame = +1

Query: 1    DSYAALSLGNWNYFAAIRSEKRGPKLEATHLEKAKELYTKVLIQHPSNLYAANGAAVVLA 180
            DSYA LSLGNWNYFAAIR+EKR PKLEATHLEKAKELYT+VL+QH +NLYAANGA VVLA
Sbjct: 600  DSYAILSLGNWNYFAAIRNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGAGVVLA 659

Query: 181  EKGQFDVSKDIFTQVQEASSGSVFVQMSDVWINLAHVYFAQGQFALAVKMYQNCLRKFYF 360
            EKG FDVSKD+F +VQEA+SGS+FVQM DVWINLAHVYFAQG FALAVKMYQNCLRKFY+
Sbjct: 660  EKGHFDVSKDLFMEVQEAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYY 719

Query: 361  NTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHMAPSNYTLRFDAGVAMQKFSASTLQKTK 540
            +TD+Q+LLYLARTHYEAEQWQ+CKKTLLRAIH+APSNY LRFDAGVAMQKFSASTLQKTK
Sbjct: 720  STDSQILLYLARTHYEAEQWQECKKTLLRAIHLAPSNYILRFDAGVAMQKFSASTLQKTK 779

Query: 541  RTADEVRSTVSELQNAVRVFSQLSAASSHHTHGFDEKKIETHVEYCKHLLEAAKVHCEAA 720
            RT DEVRSTV EL+NAVR+FSQLSA+S+ H HGFDEKKI THVEYCKHLLEAAKVH EAA
Sbjct: 780  RTVDEVRSTVDELENAVRLFSQLSASSNLHFHGFDEKKINTHVEYCKHLLEAAKVHREAA 839

Query: 721  XXXXXXXXXXLEVARQVSLXXXXXXXXXXXXXYQLERRKQEDEIKQVRQQEERFERVKEQ 900
                       EVARQ++L             + LE+RKQEDE+K+VRQQEE FERVKEQ
Sbjct: 840  EREEQQNRQRQEVARQMALAEEARRKAEEQKKFLLEKRKQEDELKRVRQQEEHFERVKEQ 899

Query: 901  WKSSTPASKRKDRSQA----XXXXXXXXXXXXXXXXXXXXXXSHNEMDETEPNY---EHE 1059
            WK+STP SKR+DRS+                           S  E++E E +      E
Sbjct: 900  WKTSTPGSKRRDRSEVDEEEGGHSEKRRRKGGKRRKKEKSSKSRYEIEEGEADMMDDREE 959

Query: 1060 MDDDDANMTNNYEDDTNQ 1113
            ++D+DAN+  NY +  N+
Sbjct: 960  LEDEDANV--NYGEHKNR 975


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score =  498 bits (1283), Expect = e-139
 Identities = 257/366 (70%), Positives = 290/366 (79%), Gaps = 5/366 (1%)
 Frame = +1

Query: 1    DSYAALSLGNWNYFAAIRSEKRGPKLEATHLEKAKELYTKVLIQHPSNLYAANGAAVVLA 180
            DSYA LSLGNWNYFAAIR+EKR PKLEATHLEKAKELYT+VL+QH +NLYAANGA VVLA
Sbjct: 624  DSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGAGVVLA 683

Query: 181  EKGQFDVSKDIFTQVQEASSGSVFVQMSDVWINLAHVYFAQGQFALAVKMYQNCLRKFYF 360
            EKG FDVSKD+FTQVQEA+SGS+FVQM DVWINLAHVYFAQG FALAVKMYQNCL+KF++
Sbjct: 684  EKGHFDVSKDLFTQVQEAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLQKFFY 743

Query: 361  NTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHMAPSNYTLRFDAGVAMQKFSASTLQKTK 540
            NTD+Q+LLYLARTHYEAEQWQDCK+TLLRAIH+ PSNYTLRFDAGVAMQKFSASTLQKTK
Sbjct: 744  NTDSQILLYLARTHYEAEQWQDCKRTLLRAIHLTPSNYTLRFDAGVAMQKFSASTLQKTK 803

Query: 541  RTADEVRSTVSELQNAVRVFSQLSAASSHHTHGFDEKKIETHVEYCKHLLEAAKVHCEAA 720
            RT DEVRSTV EL+NAVR+FSQLSAAS+ + +GFDEKKI THVEYCKHLLEAA VH EAA
Sbjct: 804  RTVDEVRSTVDELENAVRLFSQLSAASNLYFNGFDEKKINTHVEYCKHLLEAAIVHREAA 863

Query: 721  XXXXXXXXXXLEVARQVSLXXXXXXXXXXXXXYQLERRKQEDEIKQVRQQEERFERVKEQ 900
                      L++ARQ++L             +QLERRKQEDE+K+VRQQEE FERVKEQ
Sbjct: 864  EREEQQNRQRLDLARQMALAEEARRKAEEQRKFQLERRKQEDELKRVRQQEEHFERVKEQ 923

Query: 901  WKSSTPASKRKDRSQ----AXXXXXXXXXXXXXXXXXXXXXXSHNEMDETEPNYEH-EMD 1065
            WKSST ASKR+DR+                            S  EM+E +   +H E +
Sbjct: 924  WKSSTSASKRRDRADIDDGEGGHGEKRRRKGGKRRKKEKSSRSRYEMEEADMMDDHDEPE 983

Query: 1066 DDDANM 1083
            DDDAN+
Sbjct: 984  DDDANV 989


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1086

 Score =  493 bits (1268), Expect = e-137
 Identities = 255/373 (68%), Positives = 284/373 (76%), Gaps = 4/373 (1%)
 Frame = +1

Query: 1    DSYAALSLGNWNYFAAIRSEKRGPKLEATHLEKAKELYTKVLIQHPSNLYAANGAAVVLA 180
            DSYA+LSLGNWNYFAA+R+EKR PKLEATHLEKAKELYT+VLIQH SNLYAANGAAVVLA
Sbjct: 623  DSYASLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVLIQHSSNLYAANGAAVVLA 682

Query: 181  EKGQFDVSKDIFTQVQEASSGSVFVQMSDVWINLAHVYFAQGQFALAVKMYQNCLRKFYF 360
            EKG FDVSKDIFTQVQEA+SGSVFVQM DVWINLAHVYFAQG F LAVKMYQNCLRKFY 
Sbjct: 683  EKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCLRKFYH 742

Query: 361  NTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHMAPSNYTLRFDAGVAMQKFSASTLQKTK 540
            NTD+Q+LLYLARTHYEAEQWQDC KTLLRAIH+APSNYTLRFDAGVAMQKFSASTLQK K
Sbjct: 743  NTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAK 802

Query: 541  RTADEVRSTVSELQNAVRVFSQLSAASSHHTHGFDEKKIETHVEYCKHLLEAAKVHCEAA 720
            RTADEVR+TV+ELQNAVRVFSQLSAAS+ H HGFDEKKI+THV YC HLL AAKVH EAA
Sbjct: 803  RTADEVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHLEAA 862

Query: 721  XXXXXXXXXXLEVARQVSLXXXXXXXXXXXXXYQLERRKQEDEIKQVRQQEERFERVKEQ 900
                       E+ARQV+              +Q+ERRKQEDE+K+V+QQEE F RVKEQ
Sbjct: 863  EREEQQVRQRQELARQVAFAEEARRKAEEQRKFQMERRKQEDELKRVQQQEEHFRRVKEQ 922

Query: 901  WKSSTPASKRKDRSQAXXXXXXXXXXXXXXXXXXXXXXSHNEMDETEPNY----EHEMDD 1068
            WKSS+ + +R+                           S +  D  EP      E EM+D
Sbjct: 923  WKSSSHSKRRERSDDEEGGGTGEKKRKKGGKRRKKDKHSKSRYDTEEPENDMMDEQEMED 982

Query: 1069 DDANMTNNYEDDT 1107
            ++A++    E  T
Sbjct: 983  EEADINYREEPQT 995


>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score =  489 bits (1258), Expect = e-136
 Identities = 244/315 (77%), Positives = 274/315 (86%)
 Frame = +1

Query: 1    DSYAALSLGNWNYFAAIRSEKRGPKLEATHLEKAKELYTKVLIQHPSNLYAANGAAVVLA 180
            DSYA LSLGNWNYFAA+R+EKR PKLEATHLEK+KELYT+VL+QHP+NLYAANGA V+LA
Sbjct: 600  DSYATLSLGNWNYFAALRNEKRNPKLEATHLEKSKELYTRVLVQHPANLYAANGAGVILA 659

Query: 181  EKGQFDVSKDIFTQVQEASSGSVFVQMSDVWINLAHVYFAQGQFALAVKMYQNCLRKFYF 360
            EKGQFDVSKDIFTQVQEA+SG++FVQM DVWINLAHVYFAQG F+LAVKMYQNCLRKFY+
Sbjct: 660  EKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFYY 719

Query: 361  NTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHMAPSNYTLRFDAGVAMQKFSASTLQKTK 540
            NTD Q+LLYLART+YEAEQWQDCKKTLLRAIH+APSNYTLRFDAGVAMQKFSASTLQKTK
Sbjct: 720  NTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTK 779

Query: 541  RTADEVRSTVSELQNAVRVFSQLSAASSHHTHGFDEKKIETHVEYCKHLLEAAKVHCEAA 720
            RTADEVRSTV+EL+NAVRVFSQLSAAS+ H HGFDEKKI+THV YCKHLLEAA VH +AA
Sbjct: 780  RTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCKHLLEAAGVHLKAA 839

Query: 721  XXXXXXXXXXLEVARQVSLXXXXXXXXXXXXXYQLERRKQEDEIKQVRQQEERFERVKEQ 900
                       E+ARQV+L             +QLERRK EDE K++ QQE+ F+RVKEQ
Sbjct: 840  EHEEQQIRQRQELARQVALAEDARRKADEQRKFQLERRKLEDEEKRMMQQEQHFKRVKEQ 899

Query: 901  WKSSTPASKRKDRSQ 945
            WKS TPA KR++RS+
Sbjct: 900  WKSITPA-KRRERSE 913