BLASTX nr result

ID: Aconitum21_contig00009602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00009602
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloro...   117   1e-24
sp|P02398.2|RK12_SPIOL RecName: Full=50S ribosomal protein L12, ...   113   2e-23
gb|ABK22887.1| unknown [Picea sitchensis]                             110   9e-23
sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, ...   107   1e-21
sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, ...   107   1e-21

>ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloroplastic [Vitis
           vinifera]
          Length = 184

 Score =  117 bits (293), Expect = 1e-24
 Identities = 69/107 (64%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
 Frame = +3

Query: 24  PISAVAS-EKIETIGKQLSELTLLEARSLVDWLQEELGVTXXXXXXXXXXXXXXXXXXXX 200
           PISAVA+ EKIE IG +LS LTL EAR LVDWLQ++LGV+                    
Sbjct: 49  PISAVAAPEKIEKIGTELSNLTLEEARILVDWLQDKLGVSAAAFAPAAVAVAPGAVADAP 108

Query: 201 XXXXXKTEFDVVIEEVPSNARIATIKAVRALTSLALKEAKELIEGLP 341
                KTEFDV+IE+VPSNARIATIKAVRALTSLALKEAKELIEGLP
Sbjct: 109 AVVEEKTEFDVMIEDVPSNARIATIKAVRALTSLALKEAKELIEGLP 155


>sp|P02398.2|RK12_SPIOL RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|170115|gb|AAA34031.1|
           ribosomal L12 precursor [Spinacia oleracea]
           gi|47154904|emb|CAA31551.1| SocL12 [Spinacia oleracea]
          Length = 189

 Score =  113 bits (282), Expect = 2e-23
 Identities = 67/113 (59%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
 Frame = +3

Query: 6   KSARLPPISAV-ASEKIETIGKQLSELTLLEARSLVDWLQEELGVTXXXXXXXXXXXXXX 182
           ++ RL PI+AV A EKIE +G QLS LTL EAR LVDWLQ++LGV+              
Sbjct: 48  RTTRLRPIAAVEAPEKIEQLGTQLSGLTLEEARVLVDWLQDKLGVSAASFAPAAAVAAPG 107

Query: 183 XXXXXXXXXXXKTEFDVVIEEVPSNARIATIKAVRALTSLALKEAKELIEGLP 341
                      KTEFDV I+EVPSNARI+ IKAVRALTSL LKEAKELIEGLP
Sbjct: 108 APADAAPAVEEKTEFDVSIDEVPSNARISVIKAVRALTSLGLKEAKELIEGLP 160


>gb|ABK22887.1| unknown [Picea sitchensis]
          Length = 199

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/112 (54%), Positives = 75/112 (66%)
 Frame = +3

Query: 6   KSARLPPISAVASEKIETIGKQLSELTLLEARSLVDWLQEELGVTXXXXXXXXXXXXXXX 185
           ++A +   +A A+ K+E +G +L +LTL EARSLVDWLQEELGV+               
Sbjct: 59  RTAPVRATAAAANPKVEKLGIELKQLTLEEARSLVDWLQEELGVSAAAFAPAAVGAAPAA 118

Query: 186 XXXXXXXXXXKTEFDVVIEEVPSNARIATIKAVRALTSLALKEAKELIEGLP 341
                     KTEFDVVI+EVPSNARIA IK +R+LTSLALKEAK+LIEGLP
Sbjct: 119 VAEAAPVVEEKTEFDVVIDEVPSNARIAVIKVIRSLTSLALKEAKDLIEGLP 170


>sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|248303|gb|AAB21989.1|
           ribosomal protein L12 [Nicotiana sylvestris]
          Length = 186

 Score =  107 bits (267), Expect = 1e-21
 Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
 Frame = +3

Query: 18  LPPISAV-ASEKIETIGKQLSELTLLEARSLVDWLQEELGVTXXXXXXXXXXXXXXXXXX 194
           L P++AV A EK+  +G ++S LTL +A+ LV++LQ++LGVT                  
Sbjct: 49  LRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVVAAPGAAAE 108

Query: 195 XXXXXXXKTEFDVVIEEVPSNARIATIKAVRALTSLALKEAKELIEGLP 341
                  KTEFDVVI+EVPSNARIATIKAVRALTSLALKEAKELIEGLP
Sbjct: 109 APAVVEEKTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLP 157


>sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|20018|emb|CAA44214.1|
           ribosomal protein L12-1 [Nicotiana tabacum]
          Length = 186

 Score =  107 bits (267), Expect = 1e-21
 Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
 Frame = +3

Query: 18  LPPISAV-ASEKIETIGKQLSELTLLEARSLVDWLQEELGVTXXXXXXXXXXXXXXXXXX 194
           L P++AV A EK+  +G ++S LTL +A+ LV++LQ++LGVT                  
Sbjct: 49  LRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVAAAPGAAAE 108

Query: 195 XXXXXXXKTEFDVVIEEVPSNARIATIKAVRALTSLALKEAKELIEGLP 341
                  KTEFDVVI+EVPSNARIATIKAVRALTSLALKEAKELIEGLP
Sbjct: 109 APAVVEEKTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLP 157


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